BLASTX nr result

ID: Coptis21_contig00005353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005353
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246...   317   5e-84
ref|XP_002317257.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78
ref|XP_002305621.1| predicted protein [Populus trichocarpa] gi|2...   271   3e-70
gb|EEC82251.1| hypothetical protein OsI_26436 [Oryza sativa Indi...   263   7e-68
ref|XP_002463006.1| hypothetical protein SORBIDRAFT_02g036080 [S...   260   4e-67

>ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246768 isoform 1 [Vitis
           vinifera] gi|297745662|emb|CBI40873.3| unnamed protein
           product [Vitis vinifera]
          Length = 249

 Score =  317 bits (811), Expect = 5e-84
 Identities = 151/226 (66%), Positives = 174/226 (76%)
 Frame = +1

Query: 148 SVLDFDMLCATVALQAQTGVGFSSREKIDDDYESSGEFGGGVQRMWEGEILDCFEDRRIA 327
           +VLDFDMLC+TVALQAQ G         + D E SGEFGG V RMWEGE+LDCFEDRRIA
Sbjct: 26  AVLDFDMLCSTVALQAQ-GKWTKFDHNGNGDDEDSGEFGG-VFRMWEGELLDCFEDRRIA 83

Query: 328 VETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXXQRGFLYLAIVLT 507
           ++TACCPCYRFGKNMRRAGFG CFIQG VY IL               +  FLY+A+  T
Sbjct: 84  IQTACCPCYRFGKNMRRAGFGSCFIQGTVYFILSFSAFLSCIAFFVTKRHCFLYMAVAFT 143

Query: 508 VSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLDINNVQDGVWRG 687
           +S GTY+GFFR QI+K+FNI G DS LDDCV HLICPCCTLCQESRTL++NNVQDG W G
Sbjct: 144 ISIGTYMGFFRTQIKKKFNIRGGDSSLDDCVYHLICPCCTLCQESRTLEMNNVQDGTWHG 203

Query: 688 RGDTICIGSYGEGSKGFVELHRPPLIQTKSPDPCSMQRASNGSDHS 825
           RGDTICIGSYGE SK F ELH PPL+ TKSP+PCSMQ++++ ++ S
Sbjct: 204 RGDTICIGSYGESSKAFFELHPPPLVSTKSPEPCSMQKSTDSNERS 249


>ref|XP_002317257.1| predicted protein [Populus trichocarpa] gi|222860322|gb|EEE97869.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  298 bits (762), Expect = 2e-78
 Identities = 146/229 (63%), Positives = 168/229 (73%), Gaps = 5/229 (2%)
 Frame = +1

Query: 148 SVLDFDMLCATVALQAQTG--VGFSSREKIDDD---YESSGEFGGGVQRMWEGEILDCFE 312
           SVLDFDMLC+TVA+Q Q        S E+ DDD   Y + G  GGG  RMWEGE+LDCF+
Sbjct: 5   SVLDFDMLCSTVAMQTQGKYWAKLGSNEEEDDDLNRYNNGG--GGGGFRMWEGEVLDCFD 62

Query: 313 DRRIAVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXXQRGFLYL 492
           DRRIA+E+ CCPCYRFGKNMRRAGFG CF+QG  Y IL               +R FLYL
Sbjct: 63  DRRIAIESLCCPCYRFGKNMRRAGFGSCFLQGIAYYILGLGALLNFIAFIVTKRRRFLYL 122

Query: 493 AIVLTVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLDINNVQD 672
           +IV T S G YLGFFR Q+RK+FNI GSDS LDDC+ HLICPCCTL QESRTL++NNVQD
Sbjct: 123 SIVFTFSLGIYLGFFRTQMRKKFNIRGSDSSLDDCIYHLICPCCTLSQESRTLEMNNVQD 182

Query: 673 GVWRGRGDTICIGSYGEGSKGFVELHRPPLIQTKSPDPCSMQRASNGSD 819
           G W GRGDTIC+GSY EG+K F+ELH PP + T SPD CSMQ+ +N SD
Sbjct: 183 GTWHGRGDTICVGSYSEGNKVFLELHPPPAVTTSSPDVCSMQKNTNVSD 231


>ref|XP_002305621.1| predicted protein [Populus trichocarpa] gi|222848585|gb|EEE86132.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  271 bits (692), Expect = 3e-70
 Identities = 130/232 (56%), Positives = 159/232 (68%), Gaps = 6/232 (2%)
 Frame = +1

Query: 148 SVLDFDMLCATVALQAQTGVGFSSREKIDDD------YESSGEFGGGVQRMWEGEILDCF 309
           SVLDFDMLC+TVA+Q Q         K +++      Y +    GGG  RMWEGE+LDCF
Sbjct: 5   SVLDFDMLCSTVAMQTQGKYWAKLESKEEEEEGDLRHYNNGVGGGGGGFRMWEGEVLDCF 64

Query: 310 EDRRIAVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXXQRGFLY 489
           +D RIA+E+ CCPCYRFGKNMRR GFG CF+QG VY                     FLY
Sbjct: 65  DDCRIAIESLCCPCYRFGKNMRRTGFGSCFLQGVVYYAFAFSALLSFVAFIVTKHLYFLY 124

Query: 490 LAIVLTVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLDINNVQ 669
            ++ +T   G YLGFFR Q++K+FNI GSDS LDDCV HLIC CC+L QESRTL++NNVQ
Sbjct: 125 FSVAITFFIGMYLGFFRTQMKKKFNIRGSDSSLDDCVYHLICSCCSLSQESRTLEMNNVQ 184

Query: 670 DGVWRGRGDTICIGSYGEGSKGFVELHRPPLIQTKSPDPCSMQRASNGSDHS 825
           DG+W GRGDTIC+GSY EG+K F+ELH P  +  KSPD CSMQ++++ SD S
Sbjct: 185 DGIWHGRGDTICVGSYSEGNKVFLELHPPSAVAAKSPDICSMQKSTDLSDQS 236


>gb|EEC82251.1| hypothetical protein OsI_26436 [Oryza sativa Indica Group]
          Length = 269

 Score =  263 bits (672), Expect = 7e-68
 Identities = 133/243 (54%), Positives = 159/243 (65%), Gaps = 3/243 (1%)
 Frame = +1

Query: 148 SVLDFDMLCATVALQAQT--GVGFSSREKIDDDYESSGEFGGGVQRMWEGEI-LDCFEDR 318
           +VLDFDMLCA+VAL A+       ++   ++      G  GGGVQRMWEG++ LDC EDR
Sbjct: 30  AVLDFDMLCASVALAAERRKDSAAAAAATVEAGGGGGGGGGGGVQRMWEGDVVLDCLEDR 89

Query: 319 RIAVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXXQRGFLYLAI 498
           RIA+E ACCPCYRFGKNMRRA  G CF+Q  VYLI                   +LY+ +
Sbjct: 90  RIALEAACCPCYRFGKNMRRANLGSCFLQAMVYLISLVAILVSLIAFSVTRHNIYLYMGL 149

Query: 499 VLTVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLDINNVQDGV 678
              +    Y G+FRR+IRKQFNI G+DS LDDCV HLICPCCTLCQE+RTL+INNVQ GV
Sbjct: 150 SSVLLIAIYTGYFRRRIRKQFNIRGTDSSLDDCVLHLICPCCTLCQEARTLEINNVQCGV 209

Query: 679 WRGRGDTICIGSYGEGSKGFVELHRPPLIQTKSPDPCSMQRASNGSDHSWSVDVNHSEPL 858
           W GRGDTIC+GS GEG+K F  LH+   +  KSP+ C M R SNG+        N  EPL
Sbjct: 210 WHGRGDTICLGSNGEGNKAFAALHKSSFVPIKSPELCGMDRTSNGA--------NEHEPL 261

Query: 859 VSS 867
           V S
Sbjct: 262 VPS 264


>ref|XP_002463006.1| hypothetical protein SORBIDRAFT_02g036080 [Sorghum bicolor]
           gi|241926383|gb|EER99527.1| hypothetical protein
           SORBIDRAFT_02g036080 [Sorghum bicolor]
          Length = 276

 Score =  260 bits (665), Expect = 4e-67
 Identities = 133/246 (54%), Positives = 161/246 (65%), Gaps = 1/246 (0%)
 Frame = +1

Query: 148 SVLDFDMLCATVALQAQTGVGFSSREKIDDDYESSGEFGGGVQRMWEGEI-LDCFEDRRI 324
           +VLDFDMLCA+VAL A+   G ++ E    D    G  GGGVQRMWEG++ LDC EDRRI
Sbjct: 41  AVLDFDMLCASVALSAERRKGAAAPEGAAGD---CGGGGGGVQRMWEGDVVLDCLEDRRI 97

Query: 325 AVETACCPCYRFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXXQRGFLYLAIVL 504
           A+E +CCPCYRFGKNMRRA  G CF+QG VY IL                  +LY+ +  
Sbjct: 98  ALEASCCPCYRFGKNMRRANLGSCFLQGMVYCILLAAVLISLIAFSVTRHHIYLYMGLGS 157

Query: 505 TVSSGTYLGFFRRQIRKQFNIGGSDSPLDDCVNHLICPCCTLCQESRTLDINNVQDGVWR 684
            +    Y G+FRR+IRKQFNI G++S LDDCV HLICPCCTLCQE+RTL++NNVQ GVW 
Sbjct: 158 VLLIAIYTGYFRRRIRKQFNIRGTESSLDDCVLHLICPCCTLCQEARTLEMNNVQCGVWH 217

Query: 685 GRGDTICIGSYGEGSKGFVELHRPPLIQTKSPDPCSMQRASNGSDHSWSVDVNHSEPLVS 864
           GRGDTIC+G  GEG+K F  L++  L+  KSP  C M R SN +D          EPLV 
Sbjct: 218 GRGDTICLGRNGEGNKAFAALNKASLVPIKSPGLCGMDRTSNAAD--------EHEPLVP 269

Query: 865 SSKL*Q 882
             +L Q
Sbjct: 270 PDQLEQ 275


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