BLASTX nr result

ID: Coptis21_contig00005343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005343
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW57612.1| hypothetical protein ZEAMMB73_787843 [Zea mays] g...   236   3e-60
emb|CBI31217.3| unnamed protein product [Vitis vinifera]              236   3e-60
ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing...   236   3e-60
ref|XP_002439269.1| hypothetical protein SORBIDRAFT_09g003530 [S...   235   4e-60
emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]   235   4e-60

>gb|AFW57612.1| hypothetical protein ZEAMMB73_787843 [Zea mays]
           gi|413917681|gb|AFW57613.1| hypothetical protein
           ZEAMMB73_787843 [Zea mays]
          Length = 775

 Score =  236 bits (601), Expect = 3e-60
 Identities = 119/192 (61%), Positives = 141/192 (73%)
 Frame = +2

Query: 14  VFESIGRITGAQIISEEVLASCSGGPRGNEQYXXXXXXXXXXMACLLGIDFSAKLIASLA 193
           +F S+ R  G+QII +EVLASCS GPRGNEQY          MACL+G+DFSAK++AS+A
Sbjct: 308 LFRSVPRSDGSQIIGDEVLASCSRGPRGNEQYAAVFAAFVAGMACLVGVDFSAKILASIA 367

Query: 194 KSFENEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQ 373
           KSFE+E+ KED                FGV SSDL+YD LSILSKRL E+DVST+LTILQ
Sbjct: 368 KSFEDEYSKEDGLSLRNLTLLFCYLCIFGVTSSDLVYDLLSILSKRLTELDVSTVLTILQ 427

Query: 374 CCGMKLRGDDPSAMKDFIFSVQNRVNDLKSPSASMPDDQPKIDNKRMEFMLETIFDIKNN 553
           CCGMKLRGDDP AMKDF+ S+QN VNDLK  S    D +  I ++RMEFMLETI DIKNN
Sbjct: 428 CCGMKLRGDDPCAMKDFVLSIQNSVNDLKLHSGVGADGKTDIRSRRMEFMLETICDIKNN 487

Query: 554 KKRAKDDPAHYT 589
           KKR K+DP+H+T
Sbjct: 488 KKRPKEDPSHHT 499


>emb|CBI31217.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  236 bits (601), Expect = 3e-60
 Identities = 126/192 (65%), Positives = 143/192 (74%)
 Frame = +2

Query: 14  VFESIGRITGAQIISEEVLASCSGGPRGNEQYXXXXXXXXXXMACLLGIDFSAKLIASLA 193
           +F S GR  G+QIISEEVLASCSGGPRGNEQY          MACL+GIDFSAKL+ASLA
Sbjct: 74  IFHSAGRRVGSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLA 133

Query: 194 KSFENEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQ 373
           KSFE+E++KED                F V +SDLIYDFL I SK+LLEIDVSTILTILQ
Sbjct: 134 KSFEDEYIKEDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQ 193

Query: 374 CCGMKLRGDDPSAMKDFIFSVQNRVNDLKSPSASMPDDQPKIDNKRMEFMLETIFDIKNN 553
           CCGMKLR DDP+AMKDFI SVQNRVN+LK+ S    D +  I+NKRMEFMLETI DIKNN
Sbjct: 194 CCGMKLRRDDPAAMKDFIQSVQNRVNELKAASG---DGESNINNKRMEFMLETICDIKNN 250

Query: 554 KKRAKDDPAHYT 589
           KKR K++   +T
Sbjct: 251 KKRTKEETVQHT 262


>ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing protein 1 [Vitis
           vinifera]
          Length = 700

 Score =  236 bits (601), Expect = 3e-60
 Identities = 126/192 (65%), Positives = 143/192 (74%)
 Frame = +2

Query: 14  VFESIGRITGAQIISEEVLASCSGGPRGNEQYXXXXXXXXXXMACLLGIDFSAKLIASLA 193
           +F S GR  G+QIISEEVLASCSGGPRGNEQY          MACL+GIDFSAKL+ASLA
Sbjct: 238 IFHSAGRRVGSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLA 297

Query: 194 KSFENEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQ 373
           KSFE+E++KED                F V +SDLIYDFL I SK+LLEIDVSTILTILQ
Sbjct: 298 KSFEDEYIKEDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQ 357

Query: 374 CCGMKLRGDDPSAMKDFIFSVQNRVNDLKSPSASMPDDQPKIDNKRMEFMLETIFDIKNN 553
           CCGMKLR DDP+AMKDFI SVQNRVN+LK+ S    D +  I+NKRMEFMLETI DIKNN
Sbjct: 358 CCGMKLRRDDPAAMKDFIQSVQNRVNELKAASG---DGESNINNKRMEFMLETICDIKNN 414

Query: 554 KKRAKDDPAHYT 589
           KKR K++   +T
Sbjct: 415 KKRTKEETVQHT 426


>ref|XP_002439269.1| hypothetical protein SORBIDRAFT_09g003530 [Sorghum bicolor]
           gi|241944554|gb|EES17699.1| hypothetical protein
           SORBIDRAFT_09g003530 [Sorghum bicolor]
          Length = 775

 Score =  235 bits (600), Expect = 4e-60
 Identities = 119/192 (61%), Positives = 140/192 (72%)
 Frame = +2

Query: 14  VFESIGRITGAQIISEEVLASCSGGPRGNEQYXXXXXXXXXXMACLLGIDFSAKLIASLA 193
           +F S+ R  G+QII +EVLASCS GPRGNEQY          MACL+GIDFSAK++AS+A
Sbjct: 308 LFRSVPRSVGSQIIGDEVLASCSRGPRGNEQYAAVFAAFVAGMACLVGIDFSAKILASIA 367

Query: 194 KSFENEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQ 373
           KSFE+E+ KED                FGV SSDL+YD LSILSKRL E+DVST+LTILQ
Sbjct: 368 KSFEDEYSKEDGLSLRNLTLLFCYLCIFGVISSDLVYDLLSILSKRLTELDVSTVLTILQ 427

Query: 374 CCGMKLRGDDPSAMKDFIFSVQNRVNDLKSPSASMPDDQPKIDNKRMEFMLETIFDIKNN 553
           CCGMKLRGDDP AMKDF+ S+QN VN LK  S    D +  I ++RMEFMLETI DIKNN
Sbjct: 428 CCGMKLRGDDPGAMKDFVLSIQNSVNQLKLHSGVREDGKTDIRSRRMEFMLETICDIKNN 487

Query: 554 KKRAKDDPAHYT 589
           KKR K+DP+H+T
Sbjct: 488 KKRPKEDPSHHT 499


>emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]
          Length = 700

 Score =  235 bits (600), Expect = 4e-60
 Identities = 126/192 (65%), Positives = 143/192 (74%)
 Frame = +2

Query: 14  VFESIGRITGAQIISEEVLASCSGGPRGNEQYXXXXXXXXXXMACLLGIDFSAKLIASLA 193
           +F S GR  G+QIISEEVLASCSGGPRGNEQY          MACL+GIDFSAKL+ASLA
Sbjct: 238 IFHSAGRRVGSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLA 297

Query: 194 KSFENEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQ 373
           KSFE+E++KED                F V +SDLIYDFL I SK+LLEIDVSTILTILQ
Sbjct: 298 KSFEDEYIKEDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQ 357

Query: 374 CCGMKLRGDDPSAMKDFIFSVQNRVNDLKSPSASMPDDQPKIDNKRMEFMLETIFDIKNN 553
           CCGMKLR DDP+AMKDFI SVQNRVN+LK+ S    D +  I+NKRMEFMLETI DIKNN
Sbjct: 358 CCGMKLRRDDPAAMKDFIQSVQNRVNELKAASG---DGESNINNKRMEFMLETICDIKNN 414

Query: 554 KKRAKDDPAHYT 589
           KKR K++   +T
Sbjct: 415 KKRTKEETXQHT 426


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