BLASTX nr result

ID: Coptis21_contig00005340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005340
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...    68   7e-10
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]    68   7e-10
emb|CBI40561.3| unnamed protein product [Vitis vinifera]               63   2e-08
emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]    58   1e-07
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...    58   1e-07

>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = -3

Query: 183 RKRSGR--ERAQSTEGSLTDVVGQFSYWRTNIDCSIPCPPIECGGCGSKILELRRSLKAN 10
           RKR+GR  E   + + S  DV  QF  WR   D SIPCPP E GGCG+ ILELRR+ KAN
Sbjct: 380 RKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILELRRNFKAN 439

Query: 9   W 7
           W
Sbjct: 440 W 440


>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = -3

Query: 183 RKRSGR--ERAQSTEGSLTDVVGQFSYWRTNIDCSIPCPPIECGGCGSKILELRRSLKAN 10
           RKR+GR  E   + + S  DV  QF  WR   D SIPCPP E GGCG+ ILELRR+ KAN
Sbjct: 380 RKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILELRRNFKAN 439

Query: 9   W 7
           W
Sbjct: 440 W 440


>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = -3

Query: 153 STEGSLTDVVGQFSYWRTNIDCSIPCPPIECGGCGSKILELRRSLKANW 7
           + + S  DV  QF  WR   D SIPCPP E GGCG+ ILELRR+ KANW
Sbjct: 346 AADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILELRRNFKANW 394


>emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]
          Length = 2281

 Score = 57.8 bits (138), Expect(2) = 1e-07
 Identities = 30/65 (46%), Positives = 35/65 (53%)
 Frame = -3

Query: 201  RYGWASRKRSGRERAQSTEGSLTDVVGQFSYWRTNIDCSIPCPPIECGGCGSKILELRRS 22
            RYGW S      + A  T     D    F  WR N+D SIPCPP   GGCG++ LELRR 
Sbjct: 1238 RYGWES------DGAHPTNNYAADTC-DFPDWRVNMDGSIPCPPKARGGCGTETLELRRI 1290

Query: 21   LKANW 7
             + NW
Sbjct: 1291 FEPNW 1295



 Score = 22.7 bits (47), Expect(2) = 1e-07
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 259  NEAYSSQWQYVERAN 215
            NEA SS  Q+VER N
Sbjct: 1208 NEAESSHQQFVERVN 1222


>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score = 57.8 bits (138), Expect(2) = 1e-07
 Identities = 30/65 (46%), Positives = 35/65 (53%)
 Frame = -3

Query: 201  RYGWASRKRSGRERAQSTEGSLTDVVGQFSYWRTNIDCSIPCPPIECGGCGSKILELRRS 22
            RYGW S      + A  T     D    F  WR N+D SIPCPP   GGCG++ LELRR 
Sbjct: 1274 RYGWES------DGAHPTNNYAADTC-DFPDWRVNMDGSIPCPPKARGGCGTETLELRRI 1326

Query: 21   LKANW 7
             + NW
Sbjct: 1327 FEPNW 1331



 Score = 22.7 bits (47), Expect(2) = 1e-07
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 259  NEAYSSQWQYVERAN 215
            NEA SS  Q+VER N
Sbjct: 1244 NEAESSHQQFVERVN 1258


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