BLASTX nr result
ID: Coptis21_contig00005339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00005339
(1280 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera] 116 8e-40
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258... 116 2e-39
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247... 106 1e-37
emb|CBI40561.3| unnamed protein product [Vitis vinifera] 100 2e-34
ref|XP_002516668.1| transcription factor, putative [Ricinus comm... 77 2e-24
>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
Length = 1160
Score = 116 bits (290), Expect(3) = 8e-40
Identities = 60/109 (55%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Frame = -3
Query: 1257 DNCNTSIFNFHRSCPNPDXXXXXXXXXXXXLREGRQPGGNEAYSSQRQYVERARSQNTDG 1078
DNCNTSI +FHRSCPNPD LREGRQPGG+EA +S +Q+VERA Q DG
Sbjct: 313 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVADG 372
Query: 1077 KGATRASRKRSD--WEGAQSAEGSLTDVVGRFPDWRTTVDCSIPCPPKE 937
K RKR+ E +A+ S DV +FPDWR T D SIPCPPKE
Sbjct: 373 KSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKE 421
Score = 53.9 bits (128), Expect(3) = 8e-40
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -1
Query: 965 TVPFPVLRKSGGCGSKILELRRILKANWASNLRNSAEKLTSNSQFPNVDSPIGCSSCLPF 786
++P P ++ GGCG+ ILELRR KANW L S+E L + Q P+ + GCS C P
Sbjct: 414 SIPCPP-KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPN 472
Query: 785 V 783
V
Sbjct: 473 V 473
Score = 42.0 bits (97), Expect(3) = 8e-40
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = -3
Query: 771 KNTGVRRAAFRSDSKDNYLYCPNVVDLRNDE 679
+N+ +R+AAFR DN+LYCPN V++ +DE
Sbjct: 480 QNSEMRKAAFRKHGHDNFLYCPNAVNITDDE 510
Score = 72.0 bits (175), Expect = 3e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -2
Query: 529 VLEKTSGVSWEPMVKWRAFRETGSKGNLKEETRSVKAIDC 410
VL+KTSG+SWEPMV WRAFRETG+K KEETR+VKAIDC
Sbjct: 529 VLDKTSGLSWEPMVMWRAFRETGAKTKFKEETRTVKAIDC 568
>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
Length = 1035
Score = 116 bits (290), Expect(3) = 2e-39
Identities = 60/109 (55%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Frame = -3
Query: 1257 DNCNTSIFNFHRSCPNPDXXXXXXXXXXXXLREGRQPGGNEAYSSQRQYVERARSQNTDG 1078
DNCNTSI +FHRSCPNPD LREGRQPGG+EA +S +Q+VERA Q DG
Sbjct: 313 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVADG 372
Query: 1077 KGATRASRKRSD--WEGAQSAEGSLTDVVGRFPDWRTTVDCSIPCPPKE 937
K RKR+ E +A+ S DV +FPDWR T D SIPCPPKE
Sbjct: 373 KSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKE 421
Score = 53.9 bits (128), Expect(3) = 2e-39
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -1
Query: 965 TVPFPVLRKSGGCGSKILELRRILKANWASNLRNSAEKLTSNSQFPNVDSPIGCSSCLPF 786
++P P ++ GGCG+ ILELRR KANW L S+E L + Q P+ + GCS C P
Sbjct: 414 SIPCPP-KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPN 472
Query: 785 V 783
V
Sbjct: 473 V 473
Score = 40.4 bits (93), Expect(3) = 2e-39
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = -3
Query: 771 KNTGVRRAAFRSDSKDNYLYCPNVVDLRNDE 679
+N+ +R+AAFR DN+L+CPN V++ +DE
Sbjct: 480 QNSEMRKAAFRKHGHDNFLFCPNAVNITDDE 510
Score = 72.0 bits (175), Expect = 3e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -2
Query: 529 VLEKTSGVSWEPMVKWRAFRETGSKGNLKEETRSVKAIDC 410
VL+KTSG+SWEPMV WRAFRETG+K KEETR+VKAIDC
Sbjct: 529 VLDKTSGLSWEPMVMWRAFRETGAKTKFKEETRTVKAIDC 568
>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
Length = 1876
Score = 106 bits (265), Expect(3) = 1e-37
Identities = 56/108 (51%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Frame = -3
Query: 1257 DNCNTSIFNFHRSCPNPDXXXXXXXXXXXXLREGRQPGGNEAYSSQRQYVERARSQNTDG 1078
DNCNTSI N HRSCPNPD LR+G QPGGNEA SS +Q+VER Q T+
Sbjct: 1205 DNCNTSIVNLHRSCPNPDCSYDLCLTCCRELRKGLQPGGNEAESSHQQFVERVNGQGTEV 1264
Query: 1077 KGATRASRKRSDWE--GAQSAEGSLTDVVGRFPDWRTTVDCSIPCPPK 940
KG A +R WE GA D FPDWR +D SIPCPPK
Sbjct: 1265 KGRIPAHDERYGWESDGAHPTNNYAADTCD-FPDWRVNMDGSIPCPPK 1311
Score = 60.1 bits (144), Expect(3) = 1e-37
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = -1
Query: 965 TVPFPVLRKSGGCGSKILELRRILKANWASNLRNSAEKLTSNSQFPNVDSPIGCSSCLP 789
++P P + GGCG++ LELRRI + NW +L SAE LT N P++D GCS CLP
Sbjct: 1305 SIPCPP-KARGGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLP 1362
Score = 38.1 bits (87), Expect(3) = 1e-37
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -3
Query: 771 KNTGVRRAAFRSDSKDNYLYCPNVVDLRNDE 679
K+ VRRAAFR +S D++LYCPN L ++E
Sbjct: 1371 KHCEVRRAAFRENSHDDFLYCPNSACLGDNE 1401
>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
Length = 897
Score = 99.8 bits (247), Expect(3) = 2e-34
Identities = 53/107 (49%), Positives = 61/107 (57%)
Frame = -3
Query: 1257 DNCNTSIFNFHRSCPNPDXXXXXXXXXXXXLREGRQPGGNEAYSSQRQYVERARSQNTDG 1078
DNCNTSI +FHRSCPNPD LREGRQPGG+EA +S +Q+VERA
Sbjct: 289 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERA------- 341
Query: 1077 KGATRASRKRSDWEGAQSAEGSLTDVVGRFPDWRTTVDCSIPCPPKE 937
G +A+ S DV +FPDWR T D SIPCPPKE
Sbjct: 342 -------------HGQLAADDSKADVSNQFPDWRATGDGSIPCPPKE 375
Score = 53.9 bits (128), Expect(3) = 2e-34
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -1
Query: 965 TVPFPVLRKSGGCGSKILELRRILKANWASNLRNSAEKLTSNSQFPNVDSPIGCSSCLPF 786
++P P ++ GGCG+ ILELRR KANW L S+E L + Q P+ + GCS C P
Sbjct: 368 SIPCPP-KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPN 426
Query: 785 V 783
V
Sbjct: 427 V 427
Score = 40.4 bits (93), Expect(3) = 2e-34
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = -3
Query: 771 KNTGVRRAAFRSDSKDNYLYCPNVVDLRNDE 679
+N+ +R+AAFR DN+L+CPN V++ +DE
Sbjct: 434 QNSEMRKAAFRKHGHDNFLFCPNAVNITDDE 464
Score = 72.0 bits (175), Expect = 3e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -2
Query: 529 VLEKTSGVSWEPMVKWRAFRETGSKGNLKEETRSVKAIDC 410
VL+KTSG+SWEPMV WRAFRETG+K KEETR+VKAIDC
Sbjct: 483 VLDKTSGLSWEPMVMWRAFRETGAKTKFKEETRTVKAIDC 522
>ref|XP_002516668.1| transcription factor, putative [Ricinus communis]
gi|223544163|gb|EEF45687.1| transcription factor,
putative [Ricinus communis]
Length = 939
Score = 77.0 bits (188), Expect(3) = 2e-24
Identities = 43/108 (39%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Frame = -3
Query: 1257 DNCNTSIFNFHRSCPNPDXXXXXXXXXXXXLREGRQPGGNEAYSSQRQYVERARSQNTDG 1078
DNCNTSI NFHRSC +P +R+G Q GGN+A SS Q+VER Q+T
Sbjct: 292 DNCNTSIVNFHRSCSDPGCSYDLCLTCCSEIRKGIQSGGNDAESSLHQFVERVNGQDTYL 351
Query: 1077 KGATRASRKR--SDWEGAQSAEGSLTDVVGRFPDWRTTVDCSIPCPPK 940
A++KR + + + T+ PDWR D I CPPK
Sbjct: 352 NDQITANQKRFCCEMQVSHLVNKCDTESSNDSPDWRAETDGQISCPPK 399
Score = 45.4 bits (106), Expect(3) = 2e-24
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = -1
Query: 935 GGCGSKILELRRILKANWASNLRNSAEKLTSNSQFPNVDSPIGCSSCLPF 786
GGCG+ +L +RR+ +AN L + E+L N + P+ DS GC C PF
Sbjct: 402 GGCGTGMLVMRRVFEANMVKELIKNTEELIINYKPPDTDSFQGCYLCRPF 451
Score = 37.4 bits (85), Expect(3) = 2e-24
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = -3
Query: 801 FMSSFCGKVFKNTGVRRAAFRSDSKDNYLYCPNVVDLRNDE 679
F S+ C + K+ VR+AA R S DN+LYCPN + L ++E
Sbjct: 451 FSSTDC--IMKDFEVRKAADREKSDDNFLYCPNALWLGDNE 489