BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005335
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154884.1| PREDICTED: double-strand break repair protei...   415   e-114
ref|XP_002281726.1| PREDICTED: double-strand break repair protei...   414   e-114
ref|XP_002525759.1| meiotic recombination repair protein, putati...   414   e-114
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-stran...   407   e-111

>ref|XP_004154884.1| PREDICTED: double-strand break repair protein MRE11-like [Cucumis
           sativus]
          Length = 739

 Score =  415 bits (1066), Expect = e-114
 Identities = 198/220 (90%), Positives = 209/220 (95%)
 Frame = +1

Query: 19  MGDTSRDDTSNTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIAEQKQVDMLLLGGD 198
           MG+ SR++  NTLRVLVATDCHLGY+EKDEIRR DSF+AFEEICSIAEQKQVD LLLGGD
Sbjct: 1   MGELSREEMKNTLRVLVATDCHLGYLEKDEIRRHDSFKAFEEICSIAEQKQVDFLLLGGD 60

Query: 199 LFHENKPSRSTLVKAIEILRQYCLNDQPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLP 378
           LFHENKPSRSTLVKAIEILR++CLND+PVQFQVVSDQT+NF N FGHVNYEDPHFNVGLP
Sbjct: 61  LFHENKPSRSTLVKAIEILRRHCLNDKPVQFQVVSDQTINFPNTFGHVNYEDPHFNVGLP 120

Query: 379 VFSIHGNHDDPAGVDNLSAIDILSTCNLVNYFGKMALGGSGVGQITLSPILIRKGSTSVA 558
           VFSIHGNHDDPAGVDNLSA+DILS CNLVNYFGKM LGGSGVGQITL PILIRKGSTSVA
Sbjct: 121 VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLCPILIRKGSTSVA 180

Query: 559 LYGLGNIRDERLNRMFQTPHAVQWVRPEAQEGCQVPDWFN 678
           LYGLGNIRDERLNRMFQTPHAVQW+RPEAQEGCQV DWFN
Sbjct: 181 LYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVTDWFN 220


>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis
           vinifera] gi|302143084|emb|CBI20379.3| unnamed protein
           product [Vitis vinifera]
          Length = 731

 Score =  414 bits (1065), Expect = e-114
 Identities = 199/220 (90%), Positives = 209/220 (95%)
 Frame = +1

Query: 19  MGDTSRDDTSNTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIAEQKQVDMLLLGGD 198
           MGD+SR+D SNTLRVLVATDCHLGYMEKDE+RR DSFQAFEEICSIA+QKQVD LLLGGD
Sbjct: 1   MGDSSREDASNTLRVLVATDCHLGYMEKDEVRRHDSFQAFEEICSIADQKQVDFLLLGGD 60

Query: 199 LFHENKPSRSTLVKAIEILRQYCLNDQPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLP 378
           LFHENKPSRSTLVK IEILR+Y LND+PVQF+VVSDQTVNFAN FGHVNYEDPHFNVGLP
Sbjct: 61  LFHENKPSRSTLVKTIEILRRYTLNDRPVQFEVVSDQTVNFANIFGHVNYEDPHFNVGLP 120

Query: 379 VFSIHGNHDDPAGVDNLSAIDILSTCNLVNYFGKMALGGSGVGQITLSPILIRKGSTSVA 558
           VFSIHGNHDDPAGVDNLSA+DILS CNLVNYFGKM LGGSGVGQITL PILIRKGST VA
Sbjct: 121 VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLYPILIRKGSTLVA 180

Query: 559 LYGLGNIRDERLNRMFQTPHAVQWVRPEAQEGCQVPDWFN 678
           LYGLGNIRDERLNRMFQTPHAVQW++PEAQEGCQV DWFN
Sbjct: 181 LYGLGNIRDERLNRMFQTPHAVQWMQPEAQEGCQVSDWFN 220


>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
           gi|223534909|gb|EEF36595.1| meiotic recombination repair
           protein, putative [Ricinus communis]
          Length = 765

 Score =  414 bits (1065), Expect = e-114
 Identities = 197/220 (89%), Positives = 210/220 (95%)
 Frame = +1

Query: 19  MGDTSRDDTSNTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIAEQKQVDMLLLGGD 198
           MGD S +D SN LR+LVATDCHLGYMEKDE+RR DSFQAFEEICSIAEQKQVD LLLGGD
Sbjct: 1   MGDLSSEDISNMLRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEQKQVDFLLLGGD 60

Query: 199 LFHENKPSRSTLVKAIEILRQYCLNDQPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLP 378
           LFHENKPSRSTLVKAIEILR++CLND+PVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLP
Sbjct: 61  LFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLP 120

Query: 379 VFSIHGNHDDPAGVDNLSAIDILSTCNLVNYFGKMALGGSGVGQITLSPILIRKGSTSVA 558
           VFSIHGNHDDPAGVDNLSA+DILS CNLVNYFGKMAL GSGVGQITL PIL+RKGST+VA
Sbjct: 121 VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMALEGSGVGQITLYPILVRKGSTAVA 180

Query: 559 LYGLGNIRDERLNRMFQTPHAVQWVRPEAQEGCQVPDWFN 678
           LYGLGNIRDERLNRMFQTPHAVQW+RPE+QEGC++ DWFN
Sbjct: 181 LYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCELSDWFN 220


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score =  413 bits (1062), Expect = e-113
 Identities = 198/220 (90%), Positives = 209/220 (95%)
 Frame = +1

Query: 19  MGDTSRDDTSNTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIAEQKQVDMLLLGGD 198
           MGD SRDD ++TLR+LVATDCHLGYMEKDE+RR DSFQAFEE CSIAEQK+VD LLLGGD
Sbjct: 1   MGDLSRDDDASTLRILVATDCHLGYMEKDEVRRHDSFQAFEETCSIAEQKKVDFLLLGGD 60

Query: 199 LFHENKPSRSTLVKAIEILRQYCLNDQPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLP 378
           LFHENKPSRSTLVKAIEILR++CLNDQPVQFQVVSDQTVNFAN FGHVNYEDPHFNVGLP
Sbjct: 61  LFHENKPSRSTLVKAIEILRRHCLNDQPVQFQVVSDQTVNFANVFGHVNYEDPHFNVGLP 120

Query: 379 VFSIHGNHDDPAGVDNLSAIDILSTCNLVNYFGKMALGGSGVGQITLSPILIRKGSTSVA 558
           VFSIHGNHDDPAGVDNLSA+DILS CNLVNYFGKMAL GSGVGQITL PIL+RKGST+VA
Sbjct: 121 VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMALEGSGVGQITLYPILVRKGSTAVA 180

Query: 559 LYGLGNIRDERLNRMFQTPHAVQWVRPEAQEGCQVPDWFN 678
           LYGLGNIRDERLNRMFQTPHAVQW+RPEAQEGC V DWFN
Sbjct: 181 LYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCLVSDWFN 220


>ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-strand break repair protein
           MRE11-like [Cucumis sativus]
          Length = 747

 Score =  407 bits (1046), Expect = e-111
 Identities = 198/229 (86%), Positives = 209/229 (91%), Gaps = 9/229 (3%)
 Frame = +1

Query: 19  MGDTSRDDTSNTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIAEQKQV-------- 174
           MG+ SR++  NTLRVLVATDCHLGY+EKDEIRR DSF+AFEEICSIAEQKQV        
Sbjct: 1   MGELSREEMKNTLRVLVATDCHLGYLEKDEIRRHDSFKAFEEICSIAEQKQVKXHXXXXX 60

Query: 175 -DMLLLGGDLFHENKPSRSTLVKAIEILRQYCLNDQPVQFQVVSDQTVNFANRFGHVNYE 351
            D LLLGGDLFHENKPSRSTLVKAIEILR++CLND+PVQFQVVSDQT+NF N FGHVNYE
Sbjct: 61  XDFLLLGGDLFHENKPSRSTLVKAIEILRRHCLNDKPVQFQVVSDQTINFPNTFGHVNYE 120

Query: 352 DPHFNVGLPVFSIHGNHDDPAGVDNLSAIDILSTCNLVNYFGKMALGGSGVGQITLSPIL 531
           DPHFNVGLPVFSIHGNHDDPAGVDNLSA+DILS CNLVNYFGKM LGGSGVGQITL PIL
Sbjct: 121 DPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLCPIL 180

Query: 532 IRKGSTSVALYGLGNIRDERLNRMFQTPHAVQWVRPEAQEGCQVPDWFN 678
           IRKGSTSVALYGLGNIRDERLNRMFQTPHAVQW+RPEAQEGCQV DWFN
Sbjct: 181 IRKGSTSVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVTDWFN 229