BLASTX nr result

ID: Coptis21_contig00005318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005318
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564802.1| PREDICTED: uncharacterized protein LOC100830...   213   1e-52
gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indi...   213   1e-52
ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-li...   212   2e-52
ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793...   211   4e-52
ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-li...   207   4e-51

>ref|XP_003564802.1| PREDICTED: uncharacterized protein LOC100830192 [Brachypodium
            distachyon]
          Length = 239

 Score =  213 bits (541), Expect = 1e-52
 Identities = 114/184 (61%), Positives = 132/184 (71%)
 Frame = -2

Query: 1255 DGKQQQVEDCYIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASE 1076
            DGK     D Y+ +SD++LMGQC+M TFKSSGPGGQHRNKRE+AVRL+H PTGI+AQA E
Sbjct: 57   DGKGGSPYDDYLGMSDDELMGQCDMGTFKSSGPGGQHRNKRESAVRLRHHPTGIVAQAVE 116

Query: 1075 DRSQHMNXXXXXXXXXXXXXLKVRTPIPDLQSYTPPPHLLQILPLKSTLRPSASGSQIGP 896
            DRSQH N             LKVR PI +L+ YTPP  LLQILPLKST+R    G+QIGP
Sbjct: 117  DRSQHKNRSSALSRLRTLIALKVRRPI-NLEDYTPPVELLQILPLKSTIRAKDVGNQIGP 175

Query: 895  NNSKFLLGMQALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXLAVNHLRASKGM 716
            NN KF  GMQALLDLL+AV GSV++AAK+LGLSTGA             A N LRASKG+
Sbjct: 176  NNPKFSPGMQALLDLLFAVEGSVSEAAKILGLSTGALSRLILSDDSLRAAANELRASKGL 235

Query: 715  KPLK 704
            KPL+
Sbjct: 236  KPLR 239


>gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group]
          Length = 246

 Score =  213 bits (541), Expect = 1e-52
 Identities = 114/176 (64%), Positives = 130/176 (73%)
 Frame = -2

Query: 1231 DCYIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDRSQHMNX 1052
            D Y+ +SD++LMGQCEM TFK+SGPGGQHRNKRE+AVRL+H PTGIIAQA EDRSQHMN 
Sbjct: 72   DDYLGMSDDELMGQCEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNR 131

Query: 1051 XXXXXXXXXXXXLKVRTPIPDLQSYTPPPHLLQILPLKSTLRPSASGSQIGPNNSKFLLG 872
                        LKVR PI +L+ YTPP  LLQILPLKST+R    G QIGPNNSKF  G
Sbjct: 132  ASALSRLRTLIALKVRKPI-NLEDYTPPVELLQILPLKSTIRGKDIGPQIGPNNSKFAPG 190

Query: 871  MQALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXLAVNHLRASKGMKPLK 704
            MQALLDLL+AV GSV++AAKLLGLSTGA             A N LRA+KG+KPL+
Sbjct: 191  MQALLDLLFAVEGSVSEAAKLLGLSTGAVSRLILSDDSLRAAANELRAAKGLKPLR 246


>ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
            gi|449526225|ref|XP_004170114.1| PREDICTED: peptide chain
            release factor 1-like [Cucumis sativus]
          Length = 240

 Score =  212 bits (540), Expect = 2e-52
 Identities = 113/174 (64%), Positives = 128/174 (73%)
 Frame = -2

Query: 1225 YIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDRSQHMNXXX 1046
            Y+ LSDE+LM QCEM TFK+SGPGGQHRNKRE+AVRLKH PTGIIAQA EDRSQH N   
Sbjct: 68   YLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHKNRSS 127

Query: 1045 XXXXXXXXXXLKVRTPIPDLQSYTPPPHLLQILPLKSTLRPSASGSQIGPNNSKFLLGMQ 866
                      LKVR P+ DL+ Y+PPP LLQILPLKST+RP   G QIGPNNSKFL GMQ
Sbjct: 128  ALARLRALLALKVRNPV-DLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSKFLPGMQ 186

Query: 865  ALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXLAVNHLRASKGMKPLK 704
            ALLDL+  + GSV+D AKLLGL+TGA            +AVN +R SKG+KPLK
Sbjct: 187  ALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240


>ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793467 [Glycine max]
          Length = 250

 Score =  211 bits (537), Expect = 4e-52
 Identities = 114/177 (64%), Positives = 129/177 (72%)
 Frame = -2

Query: 1234 EDCYIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDRSQHMN 1055
            E CY+ LSDE+LM QCEM TFK+SGPGGQHRNKRE+AVRLKH PTGIIAQASEDRSQH N
Sbjct: 75   EKCYLNLSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQASEDRSQHKN 134

Query: 1054 XXXXXXXXXXXXXLKVRTPIPDLQSYTPPPHLLQILPLKSTLRPSASGSQIGPNNSKFLL 875
                         LKVR  + DL++Y+PP  LLQILP KS++R S  GSQIGPNN KF  
Sbjct: 135  RASAINRLRSLIALKVRKTV-DLEAYSPPRELLQILPPKSSIRGSDCGSQIGPNNPKFAS 193

Query: 874  GMQALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXLAVNHLRASKGMKPLK 704
            GMQALLDL++AV GSV++AAK LGLSTGA              VN LRA+KGMKPLK
Sbjct: 194  GMQALLDLIFAVEGSVSEAAKYLGLSTGALSRLILSDDSLRKEVNDLRATKGMKPLK 250


>ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-like [Vitis vinifera]
            gi|297734721|emb|CBI16955.3| unnamed protein product
            [Vitis vinifera]
          Length = 224

 Score =  207 bits (528), Expect = 4e-51
 Identities = 113/174 (64%), Positives = 127/174 (72%)
 Frame = -2

Query: 1225 YIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDRSQHMNXXX 1046
            ++ LSDEQLM QCEM+TFKSSGPGGQHRNKRE+AVRLKH PTGIIAQA EDRSQH N   
Sbjct: 52   FLGLSDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRAS 111

Query: 1045 XXXXXXXXXXLKVRTPIPDLQSYTPPPHLLQILPLKSTLRPSASGSQIGPNNSKFLLGMQ 866
                      LKVR  I DL +Y+PP  LLQILP KST+R S  G QIGPNN KF LGM 
Sbjct: 112  ALARLRTLLALKVRNSI-DLDTYSPPLELLQILPAKSTIRTSDCGPQIGPNNPKFALGML 170

Query: 865  ALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXLAVNHLRASKGMKPLK 704
            ALLDL++AV GS++DAAKL+GLSTGA            +AVN LR SKG+KPLK
Sbjct: 171  ALLDLIFAVEGSISDAAKLMGLSTGALSRLVLSDDSLRMAVNELRTSKGLKPLK 224


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