BLASTX nr result

ID: Coptis21_contig00005309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005309
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268589.2| PREDICTED: putative disease resistance prote...    95   7e-18
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]    93   3e-17
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...    92   3e-17
emb|CAN79463.1| hypothetical protein VITISV_000507 [Vitis vinifera]    92   6e-17
ref|XP_003632840.1| PREDICTED: putative disease resistance prote...    91   8e-17

>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/76 (60%), Positives = 59/76 (77%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   ELERVGVEYFDALAMRSFFQDFKKDDDGNIFKCKMHDLVHDFAEFLTKTDCSVL-VNNEK 179
           E+E VG  YF+ LA RSFFQDF+KDDDGNI +CKMHD+VHDFA+FLT+ +C ++ V+N+K
Sbjct: 462 EMEMVGRTYFEYLAARSFFQDFEKDDDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQK 521

Query: 180 ISS-----QKIRHLTV 212
             S     QKIRH T+
Sbjct: 522 KGSMDLFFQKIRHATL 537


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   ELERVGVEYFDALAMRSFFQDFKKDDDGNIFKCKMHDLVHDFAEFLTKTDCSVL-VNNEK 179
           E+E VG  YF+ LA RSFFQDF+KDDDGNI  CKMHD+VHDFA+FLT+ +C ++ V+N+K
Sbjct: 462 EMEMVGRTYFEYLAARSFFQDFEKDDDGNIICCKMHDIVHDFAQFLTQNECFIVEVDNQK 521

Query: 180 ISS-----QKIRHLTV 212
             S     QKIRH T+
Sbjct: 522 KGSMDLFFQKIRHATL 537


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 923

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   ELERVGVEYFDALAMRSFFQDFKKDDDGNIFKCKMHDLVHDFAEFLTKTDCSVL-VNNEK 179
           E+E VG  YF+ LA RSFFQDF+KDDDGNI  CKMHD+VHDFA+FLT  +C ++ V+N+K
Sbjct: 463 EMEMVGRTYFEYLAARSFFQDFEKDDDGNIIHCKMHDIVHDFAQFLTLNECFIVEVDNQK 522

Query: 180 ISS-----QKIRHLTV 212
             S     QKIRH T+
Sbjct: 523 KGSMDLFFQKIRHATL 538


>emb|CAN79463.1| hypothetical protein VITISV_000507 [Vitis vinifera]
          Length = 970

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/73 (61%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
 Frame = +3

Query: 3   ELERVGVEYFDALAMRSFFQDFKKDDDGNIFKCKMHDLVHDFAEFLTKTDCSVLVNNE-- 176
           E+E VG EYF+ LA RSFFQDF+KD D NI +CKMHD+VH FA+FLTK +C ++ N E  
Sbjct: 493 EMEMVGREYFEYLAARSFFQDFEKDGDDNIIRCKMHDIVHSFAQFLTKNECCIM-NEEGR 551

Query: 177 -KISSQKIRHLTV 212
            K S QKIRH T+
Sbjct: 552 TKTSFQKIRHATL 564


>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/76 (55%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   ELERVGVEYFDALAMRSFFQDFKKDDDGNIFKCKMHDLVHDFAEFLTKTDCSVL-VNNEK 179
           E+E +G  YF+ LA RSFFQDF+KD DGNI +CKMHD+VHDFA+FLT+ +C ++ V+N++
Sbjct: 440 EMEMIGRTYFEYLAARSFFQDFEKDTDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQQ 499

Query: 180 ISS-----QKIRHLTV 212
           + S     +KIRH+T+
Sbjct: 500 MESIDLSFKKIRHITL 515


Top