BLASTX nr result

ID: Coptis21_contig00005303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005303
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269541.1| PREDICTED: uncharacterized protein LOC100248...   298   1e-78
ref|XP_002304222.1| predicted protein [Populus trichocarpa] gi|2...   290   5e-76
ref|NP_001237462.1| uncharacterized protein LOC100305584 [Glycin...   289   6e-76
ref|XP_002319322.1| predicted protein [Populus trichocarpa] gi|2...   284   2e-74
ref|XP_002521748.1| conserved hypothetical protein [Ricinus comm...   279   8e-73

>ref|XP_002269541.1| PREDICTED: uncharacterized protein LOC100248177 [Vitis vinifera]
           gi|297734771|emb|CBI17005.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  298 bits (763), Expect = 1e-78
 Identities = 150/179 (83%), Positives = 161/179 (89%)
 Frame = -3

Query: 783 RIRLMSWLSKKVVDPLILILRRGAEPKQLAFSAALGITLGLFPICGVTVFLCGMAIALLR 604
           +I +  W +KK+VDPL+ ILRRGAEPKQLAFSAALGITLG+FPICGVTVFLCGMAIALL 
Sbjct: 7   KIGVGPWFNKKIVDPLLQILRRGAEPKQLAFSAALGITLGVFPICGVTVFLCGMAIALLG 66

Query: 603 SLCHSPTVMLANFIATPLELSLVVPFLRFGEVISGGTHFPLTSDALKKVLTGQASREVLL 424
           SLCHSP+VMLANFIATP+ELSLVVPFLRFGEVISGG HFPLTSDA+KKVLTG ASREVLL
Sbjct: 67  SLCHSPSVMLANFIATPIELSLVVPFLRFGEVISGGPHFPLTSDAMKKVLTGHASREVLL 126

Query: 423 SIVHALLGWLIAAPFILAILYVAFLPCFKLLVHKFSAVPSSPKKQVHSQAEDKLKVRDV 247
           SIVHALLGWL+AAPFIL ILY+ FLPC KLLV KFS VPSSPKK VH   E KLKVRDV
Sbjct: 127 SIVHALLGWLVAAPFILVILYIIFLPCCKLLVRKFSPVPSSPKKPVHPHMEVKLKVRDV 185


>ref|XP_002304222.1| predicted protein [Populus trichocarpa] gi|222841654|gb|EEE79201.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  290 bits (741), Expect = 5e-76
 Identities = 145/183 (79%), Positives = 161/183 (87%)
 Frame = -3

Query: 795 MAIWRIRLMSWLSKKVVDPLILILRRGAEPKQLAFSAALGITLGLFPICGVTVFLCGMAI 616
           MA+  +  ++WL KK+VDPL  ILRRG EPKQLAFS ALGI LG+FPICGVTV LCG+AI
Sbjct: 1   MAMPAMGFLAWLDKKIVDPLYQILRRGLEPKQLAFSTALGIALGIFPICGVTVLLCGLAI 60

Query: 615 ALLRSLCHSPTVMLANFIATPLELSLVVPFLRFGEVISGGTHFPLTSDALKKVLTGQASR 436
           ALL SLCH+PTV+LANFIATP+ELSLVVPFLRFGEV+SGG  FPLTSDALKKVLTGQASR
Sbjct: 61  ALLGSLCHAPTVLLANFIATPIELSLVVPFLRFGEVMSGGPPFPLTSDALKKVLTGQASR 120

Query: 435 EVLLSIVHALLGWLIAAPFILAILYVAFLPCFKLLVHKFSAVPSSPKKQVHSQAEDKLKV 256
           EV+LSI HALLGWL+AAPFILA LY+ FLPCFK+LVHKFS VPSSPKK  +S AE KLKV
Sbjct: 121 EVILSIAHALLGWLVAAPFILAALYIIFLPCFKVLVHKFSTVPSSPKKPSNSLAEIKLKV 180

Query: 255 RDV 247
           RDV
Sbjct: 181 RDV 183


>ref|NP_001237462.1| uncharacterized protein LOC100305584 [Glycine max]
           gi|255625983|gb|ACU13336.1| unknown [Glycine max]
          Length = 176

 Score =  289 bits (740), Expect = 6e-76
 Identities = 139/176 (78%), Positives = 158/176 (89%)
 Frame = -3

Query: 774 LMSWLSKKVVDPLILILRRGAEPKQLAFSAALGITLGLFPICGVTVFLCGMAIALLRSLC 595
           + +W+ KK+ DPL+ I+RRGAEP  LAFSAALG+TLGLFPICGVTVFLCGMAIALL S C
Sbjct: 1   MANWVQKKITDPLLSIIRRGAEPNHLAFSAALGVTLGLFPICGVTVFLCGMAIALLGSFC 60

Query: 594 HSPTVMLANFIATPLELSLVVPFLRFGEVISGGTHFPLTSDALKKVLTGQASREVLLSIV 415
           H+PTVMLANFIATP+ELSLVVPFLRFGEVISGG+HFPLTSDALKKVLTGQASREVLLS+ 
Sbjct: 61  HAPTVMLANFIATPIELSLVVPFLRFGEVISGGSHFPLTSDALKKVLTGQASREVLLSVA 120

Query: 414 HALLGWLIAAPFILAILYVAFLPCFKLLVHKFSAVPSSPKKQVHSQAEDKLKVRDV 247
           HALLGWL+A+PFIL  LY+  LPCFK+LVHKFS+VP SPKK ++  +E KLKVRDV
Sbjct: 121 HALLGWLVASPFILGTLYIVLLPCFKILVHKFSSVPLSPKKPLNPHSEVKLKVRDV 176


>ref|XP_002319322.1| predicted protein [Populus trichocarpa] gi|222857698|gb|EEE95245.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  284 bits (727), Expect = 2e-74
 Identities = 140/175 (80%), Positives = 154/175 (88%)
 Frame = -3

Query: 771 MSWLSKKVVDPLILILRRGAEPKQLAFSAALGITLGLFPICGVTVFLCGMAIALLRSLCH 592
           M+W +K +VDPL  ILRRG EPKQLA S ALGITLG+FPICGVTV LCG+AIALL SLCH
Sbjct: 1   MAWFNKSIVDPLYQILRRGLEPKQLALSTALGITLGIFPICGVTVLLCGVAIALLGSLCH 60

Query: 591 SPTVMLANFIATPLELSLVVPFLRFGEVISGGTHFPLTSDALKKVLTGQASREVLLSIVH 412
           +PTVMLANFIATPLELSLVVPF+RFGEV+SGG HFPLTSDALKKV TGQASREV+LS+ H
Sbjct: 61  APTVMLANFIATPLELSLVVPFVRFGEVMSGGPHFPLTSDALKKVFTGQASREVILSVAH 120

Query: 411 ALLGWLIAAPFILAILYVAFLPCFKLLVHKFSAVPSSPKKQVHSQAEDKLKVRDV 247
           ALLGWL+AAPFILA LY+ FLPCFK+LVHKFS VPS PKK  +S AE KLK RDV
Sbjct: 121 ALLGWLVAAPFILAALYIIFLPCFKVLVHKFSTVPSGPKKSPNSLAEVKLKGRDV 175


>ref|XP_002521748.1| conserved hypothetical protein [Ricinus communis]
           gi|223538961|gb|EEF40558.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  279 bits (713), Expect = 8e-73
 Identities = 139/183 (75%), Positives = 157/183 (85%)
 Frame = -3

Query: 795 MAIWRIRLMSWLSKKVVDPLILILRRGAEPKQLAFSAALGITLGLFPICGVTVFLCGMAI 616
           MA+  I + +W SKK+VDPL  IL RG EPKQLAFSAALGITLG+FPICGVTV LCGMAI
Sbjct: 1   MAVSMIGMNAWFSKKIVDPLYQILSRGTEPKQLAFSAALGITLGVFPICGVTVLLCGMAI 60

Query: 615 ALLRSLCHSPTVMLANFIATPLELSLVVPFLRFGEVISGGTHFPLTSDALKKVLTGQASR 436
           A+L SLCH+P+VMLANF+ATP+ELSLVVPFLRFGE+ISGG HFPLTSDA KKVLTGQAS 
Sbjct: 61  AMLGSLCHAPSVMLANFVATPIELSLVVPFLRFGELISGGPHFPLTSDAFKKVLTGQASH 120

Query: 435 EVLLSIVHALLGWLIAAPFILAILYVAFLPCFKLLVHKFSAVPSSPKKQVHSQAEDKLKV 256
           EVLLSI+HAL+GWL+AAPFILA LY+ FLPCFK+LV KFS+ P SP K   S  E +LKV
Sbjct: 121 EVLLSILHALMGWLVAAPFILAALYIIFLPCFKVLVRKFSSGPGSPIKSPTSFTEVRLKV 180

Query: 255 RDV 247
           RDV
Sbjct: 181 RDV 183


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