BLASTX nr result

ID: Coptis21_contig00005300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005300
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133703.1| PREDICTED: uncharacterized protein LOC101203...    71   8e-11
ref|XP_003540092.1| PREDICTED: uncharacterized protein LOC100306...    70   1e-10
ref|XP_002335774.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003527260.1| PREDICTED: uncharacterized protein LOC100804...    69   4e-10
gb|ACG45040.1| hypothetical protein [Zea mays] gi|413936186|gb|A...    69   4e-10

>ref|XP_004133703.1| PREDICTED: uncharacterized protein LOC101203530 [Cucumis sativus]
           gi|449478162|ref|XP_004155238.1| PREDICTED:
           uncharacterized protein LOC101231659 [Cucumis sativus]
          Length = 59

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = +2

Query: 83  GRGVIGDKWSGRFLWVCALGSAVGLWMVGVERQAQNRERMLRAAME 220
           GRGVIGDKWS R LWVCALGS +G++MV  ERQ QNR+RML  +++
Sbjct: 3   GRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLK 48


>ref|XP_003540092.1| PREDICTED: uncharacterized protein LOC100306575 [Glycine max]
           gi|255628927|gb|ACU14808.1| unknown [Glycine max]
          Length = 60

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = +2

Query: 86  RGVIGDKWSGRFLWVCALGSAVGLWMVGVERQAQNRERMLRAAMEAGADG 235
           RGVI DKWS R LW CA+GSAV L+MV VERQAQNR+RML   ++A   G
Sbjct: 4   RGVIADKWSMRILWACAIGSAVSLYMVAVERQAQNRQRMLAEELKAMESG 53


>ref|XP_002335774.1| predicted protein [Populus trichocarpa]
           gi|224128173|ref|XP_002329099.1| predicted protein
           [Populus trichocarpa] gi|222834723|gb|EEE73186.1|
           predicted protein [Populus trichocarpa]
           gi|222869768|gb|EEF06899.1| predicted protein [Populus
           trichocarpa]
          Length = 60

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = +2

Query: 83  GRGVIGDKWSGRFLWVCALGSAVGLWMVGVERQAQNRERMLRAAME 220
           GRGVIGDKWS R LW CA+GS V L+MV VERQ QNRERM+   ++
Sbjct: 3   GRGVIGDKWSSRVLWACAIGSVVSLYMVVVERQLQNRERMMAEGLK 48


>ref|XP_003527260.1| PREDICTED: uncharacterized protein LOC100804039 [Glycine max]
           gi|255647088|gb|ACU24012.1| unknown [Glycine max]
          Length = 60

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = +2

Query: 86  RGVIGDKWSGRFLWVCALGSAVGLWMVGVERQAQNRERMLRAAMEAGADG 235
           RG++ DKWS R LW CA+GSAV L+MV VERQAQNR+RML   ++A   G
Sbjct: 4   RGIVPDKWSMRILWACAIGSAVSLYMVAVERQAQNRQRMLAEELKAMESG 53


>gb|ACG45040.1| hypothetical protein [Zea mays] gi|413936186|gb|AFW70737.1|
           hypothetical protein ZEAMMB73_610965 [Zea mays]
          Length = 59

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = +2

Query: 83  GRGVIGDKWSGRFLWVCALGSAVGLWMVGVERQAQNRERMLRAAMEA 223
           GRGV+GD+WS R LW+CALGSAV L+ V VERQAQNR R +   ++A
Sbjct: 5   GRGVVGDRWSQRILWICALGSAVSLYFVAVERQAQNRARAVAEGLKA 51


Top