BLASTX nr result

ID: Coptis21_contig00005291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005291
         (1495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522751.1| RNA-binding protein, putative [Ricinus commu...   169   1e-39
ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cuc...   165   3e-38
ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212...   165   3e-38
ref|XP_003532176.1| PREDICTED: uncharacterized protein LOC100813...   164   4e-38
ref|XP_003530798.1| PREDICTED: uncharacterized protein LOC100782...   162   3e-37

>ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
            gi|223537989|gb|EEF39602.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 702

 Score =  169 bits (429), Expect = 1e-39
 Identities = 107/290 (36%), Positives = 133/290 (45%), Gaps = 5/290 (1%)
 Frame = +2

Query: 185  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXXS-FPPVGGVGLSGVAPHVNPS 361
            HP SMMGQGFDPA                          S FPPVGGVGL GVAPHVNP+
Sbjct: 420  HPNSMMGQGFDPAFGAPMGRMGSYGGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHVNPA 479

Query: 362  FFXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAG--RXXXXXXXXXXXXHQY 535
            FF                 D   M MWSDPS  GW  ED  G               HQY
Sbjct: 480  FFGRGMPMNGMGMMPTTGVDGPNMGMWSDPSMGGWGVEDHGGGRAGESSYGEEAASDHQY 539

Query: 536  XXXXXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRDED--GYNNEYVX 709
                       N +K+KDR SERDWSGSSDR+YRD+R+   DRD+PR++D  G+++++  
Sbjct: 540  GEVSHDRGGWQNTMKEKDRASERDWSGSSDRRYRDDREAGYDRDMPREKDMGGHDHDW-- 597

Query: 710  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDRGPEYDDMGH 889
                                                           Y++    Y D  +
Sbjct: 598  --PERRHREDRDVGRERDRERERDRERSRDRERERERDRDRDRDHDRYREDRDRYAD--N 653

Query: 890  NKYKDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDVSKRRRLPSE 1039
            ++Y+DR  E+D+DWDRGRSSR ++KSR+S E   R+R  D  KRRRL SE
Sbjct: 654  HRYRDREVEHDDDWDRGRSSRTHTKSRLSQERS-RSRDADYGKRRRLTSE 702


>ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cucumis sativus]
          Length = 697

 Score =  165 bits (417), Expect = 3e-38
 Identities = 107/292 (36%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
 Frame = +2

Query: 185  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXXS-FPPVGGVGLSGVAPHVNPS 361
            HPQSMMGQGFDP+                          S FPPVGGVGL GVAPHVNP+
Sbjct: 408  HPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPA 467

Query: 362  FFXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAG--RXXXXXXXXXXXXHQY 535
            FF                 D   M MWSDPS  GW  E+  G                 Y
Sbjct: 468  FFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQHY 527

Query: 536  XXXXXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRD-EDGYNNEYVXX 712
                       N+ K+KDR SERDWS SSDR+YRD+RD   DR+  ++ + G ++++   
Sbjct: 528  GEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDR 587

Query: 713  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YKDRGPEYDDMGH 889
                                                           YKD   +Y D  H
Sbjct: 588  RPREDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYKDDRDKYSD--H 645

Query: 890  NKYKDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDV--SKRRRLPSE 1039
            ++Y+DR PE+DEDW+RGRSSR +SKSR+S EE+ R+R RD    KRRRL SE
Sbjct: 646  HRYRDREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTSE 697


>ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212980 [Cucumis sativus]
          Length = 697

 Score =  165 bits (417), Expect = 3e-38
 Identities = 107/292 (36%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
 Frame = +2

Query: 185  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXXS-FPPVGGVGLSGVAPHVNPS 361
            HPQSMMGQGFDP+                          S FPPVGGVGL GVAPHVNP+
Sbjct: 408  HPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPA 467

Query: 362  FFXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAG--RXXXXXXXXXXXXHQY 535
            FF                 D   M MWSDPS  GW  E+  G                 Y
Sbjct: 468  FFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQHY 527

Query: 536  XXXXXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRD-EDGYNNEYVXX 712
                       N+ K+KDR SERDWS SSDR+YRD+RD   DR+  ++ + G ++++   
Sbjct: 528  GEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDR 587

Query: 713  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YKDRGPEYDDMGH 889
                                                           YKD   +Y D  H
Sbjct: 588  RPREDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYKDDRDKYSD--H 645

Query: 890  NKYKDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDV--SKRRRLPSE 1039
            ++Y+DR PE+DEDW+RGRSSR +SKSR+S EE+ R+R RD    KRRRL SE
Sbjct: 646  HRYRDREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTSE 697


>ref|XP_003532176.1| PREDICTED: uncharacterized protein LOC100813702 [Glycine max]
          Length = 693

 Score =  164 bits (416), Expect = 4e-38
 Identities = 99/292 (33%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
 Frame = +2

Query: 185  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVGGVGLSGVAPHVNPSF 364
            HPQSMM QGFDPA                          SFP VGGVGL GVAPHVNP+F
Sbjct: 417  HPQSMMNQGFDPAFGPMGRMGSYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAF 476

Query: 365  FXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAGRXXXXXXXXXXXXHQYXXX 544
            F                 D   M MWSDP+  GW GE+P G               +   
Sbjct: 477  FGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYG 536

Query: 545  XXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRDED-GYNNEYVXXXXX 721
                      +++KDR SERDWSG+S+R+YRD+RD   DRD P+++D G+++E+      
Sbjct: 537  EVSHDRAGWPMREKDRGSERDWSGTSERRYRDDRDQGYDRDAPKEKDMGHDHEW------ 590

Query: 722  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDRGPEYDD----MGH 889
                                                       Y++R    +D      H
Sbjct: 591  ---------SERRHRDDRETGRERSRDRDRERSRDRDRDRERDYRERDRHKEDRDRYADH 641

Query: 890  NKYKDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDV--SKRRRLPSE 1039
            ++Y+DR  E+D++W+RGRSS+ +SKS++S EE++ +R RD    KRRRL SE
Sbjct: 642  HRYRDREAEHDDEWERGRSSKPHSKSQLSQEEEHHSRPRDADYGKRRRLTSE 693


>ref|XP_003530798.1| PREDICTED: uncharacterized protein LOC100782869 [Glycine max]
          Length = 668

 Score =  162 bits (409), Expect = 3e-37
 Identities = 100/289 (34%), Positives = 134/289 (46%), Gaps = 4/289 (1%)
 Frame = +2

Query: 185  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXX-SFPPVGGVGLSGVAPHVNPS 361
            HPQSMM QGFDPA                           SFP VGGVGL GVAPHVNP+
Sbjct: 391  HPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPA 450

Query: 362  FFXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAGRXXXXXXXXXXXXHQYXX 541
            FF                 D   M MWSDP+  GW GE+P G               +  
Sbjct: 451  FFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQY 510

Query: 542  XXXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRDED-GYNNEYVXXXX 718
                       +++KDR SERDWSG+S+R+YRD+RD   +RD P++ED G+++E+     
Sbjct: 511  GEVSHDRAGWPMREKDRGSERDWSGTSERRYRDDRDQGYERDAPKEEDMGHDHEW----- 565

Query: 719  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDRGPEYDDMGHNKY 898
                                                        +++   +Y D  H++Y
Sbjct: 566  ----SERRHRDDRETGRERSRDRDRERSRDRDRDRERDHRERDRHREDRDKYAD--HHRY 619

Query: 899  KDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDV--SKRRRLPSE 1039
            +DR  E+D++W+RGRSSR +SKSR+S EE++ +R RD    KRRRL SE
Sbjct: 620  RDREAEHDDEWERGRSSRMHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 668


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