BLASTX nr result

ID: Coptis21_contig00005287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005287
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313934.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_004136927.1| PREDICTED: basic form of pathogenesis-relate...   144   6e-33
gb|AFM77011.1| pathogenesis related protein 1a, partial [Cydonia...   144   8e-33
gb|AFK64734.1| pathogenesis related protein 1a, partial [Cydonia...   144   8e-33
ref|XP_002334377.1| predicted protein [Populus trichocarpa] gi|1...   144   8e-33

>ref|XP_002313934.1| predicted protein [Populus trichocarpa] gi|222850342|gb|EEE87889.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  145 bits (365), Expect = 4e-33
 Identities = 65/85 (76%), Positives = 72/85 (84%)
 Frame = -1

Query: 255 HSGGPYGENLAWGSDSSLTGTAAVNMWVAEKQDYDYNSNTCSSGAVCGHYTQVVWRNSVR 76
           HSGGPYGENLAW S + L+GT AV MWV EK  YDYNSN+C++G  CGHYTQVVWRNS R
Sbjct: 72  HSGGPYGENLAWSS-ADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSAR 130

Query: 75  LGCAKVICSTGGTFIICSYDPPGNF 1
           LGCAKV CSTGGTFI C+YDPPGN+
Sbjct: 131 LGCAKVKCSTGGTFIGCNYDPPGNY 155


>ref|XP_004136927.1| PREDICTED: basic form of pathogenesis-related protein 1-like
           [Cucumis sativus] gi|449478785|ref|XP_004155418.1|
           PREDICTED: basic form of pathogenesis-related protein
           1-like [Cucumis sativus]
          Length = 164

 Score =  144 bits (364), Expect = 6e-33
 Identities = 65/86 (75%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
 Frame = -1

Query: 255 HSGGPYGENLAWGSDSSLTGTAAVNMWVAEKQDYDYNSNTCSSGAVCGHYTQVVWRNSVR 76
           HSGGPYGEN+AWG    L+GTAAV MWV EK+ YDY SNTC++  VCGHYTQVVWRNSVR
Sbjct: 74  HSGGPYGENIAWGMPD-LSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWRNSVR 132

Query: 75  LGCAKVIC-STGGTFIICSYDPPGNF 1
           +GCAKVIC + GGTFI C+YDPPGNF
Sbjct: 133 IGCAKVICTNNGGTFITCNYDPPGNF 158


>gb|AFM77011.1| pathogenesis related protein 1a, partial [Cydonia oblonga]
          Length = 154

 Score =  144 bits (363), Expect = 8e-33
 Identities = 64/85 (75%), Positives = 73/85 (85%)
 Frame = -1

Query: 255 HSGGPYGENLAWGSDSSLTGTAAVNMWVAEKQDYDYNSNTCSSGAVCGHYTQVVWRNSVR 76
           HSGGPYGENLA  S   ++GTAAV+MWVAEK DYDY SN+C+ G VCGHYTQVVWRNS R
Sbjct: 65  HSGGPYGENLAM-STGDMSGTAAVDMWVAEKADYDYESNSCADGKVCGHYTQVVWRNSAR 123

Query: 75  LGCAKVICSTGGTFIICSYDPPGNF 1
           +GCAKV CS+GGTFI C+YDPPGN+
Sbjct: 124 VGCAKVRCSSGGTFIGCNYDPPGNY 148


>gb|AFK64734.1| pathogenesis related protein 1a, partial [Cydonia oblonga]
          Length = 153

 Score =  144 bits (363), Expect = 8e-33
 Identities = 64/85 (75%), Positives = 73/85 (85%)
 Frame = -1

Query: 255 HSGGPYGENLAWGSDSSLTGTAAVNMWVAEKQDYDYNSNTCSSGAVCGHYTQVVWRNSVR 76
           HSGGPYGENLA  S   ++GTAAV+MWVAEK DYDY SN+C+ G VCGHYTQVVWRNS R
Sbjct: 64  HSGGPYGENLAM-STGDMSGTAAVDMWVAEKADYDYESNSCADGKVCGHYTQVVWRNSAR 122

Query: 75  LGCAKVICSTGGTFIICSYDPPGNF 1
           +GCAKV CS+GGTFI C+YDPPGN+
Sbjct: 123 VGCAKVRCSSGGTFIGCNYDPPGNY 147


>ref|XP_002334377.1| predicted protein [Populus trichocarpa] gi|118485875|gb|ABK94784.1|
           unknown [Populus trichocarpa]
           gi|118488561|gb|ABK96093.1| unknown [Populus
           trichocarpa] gi|222871723|gb|EEF08854.1| predicted
           protein [Populus trichocarpa]
          Length = 161

 Score =  144 bits (363), Expect = 8e-33
 Identities = 64/85 (75%), Positives = 72/85 (84%)
 Frame = -1

Query: 255 HSGGPYGENLAWGSDSSLTGTAAVNMWVAEKQDYDYNSNTCSSGAVCGHYTQVVWRNSVR 76
           HSGGPYGEN+AW S + L+GT AV MWV EK  YDYNSN+C++G  CGHYTQVVWRNS R
Sbjct: 72  HSGGPYGENIAWSS-ADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSAR 130

Query: 75  LGCAKVICSTGGTFIICSYDPPGNF 1
           LGCAKV CSTGGTFI C+YDPPGN+
Sbjct: 131 LGCAKVKCSTGGTFIGCNYDPPGNY 155


Top