BLASTX nr result

ID: Coptis21_contig00005283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005283
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264568.1| PREDICTED: uncharacterized protein LOC100241...   172   1e-40
gb|ADN87331.1| zinc finger protein-like protein [Vitis vinifera]      171   3e-40
ref|XP_003530172.1| PREDICTED: uncharacterized protein LOC100781...   146   1e-32
gb|AEP17822.1| B-box 52 protein [Expression vector pMON108080]        145   3e-32
ref|XP_002316440.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-31

>ref|XP_002264568.1| PREDICTED: uncharacterized protein LOC100241102 [Vitis vinifera]
          Length = 260

 Score =  172 bits (437), Expect = 1e-40
 Identities = 113/260 (43%), Positives = 141/260 (54%), Gaps = 6/260 (2%)
 Frame = +3

Query: 414  MKDKVTCELCNVEASLYCMSDSAFLCYNCDARVHEANFLVARHVRRTICSICKRFDGNHV 593
            MK +V CELCN EASLYC SDSAFLC++CDARVH ANFLVARHVR T+CS C    G+  
Sbjct: 1    MKGRV-CELCNEEASLYCGSDSAFLCWSCDARVHGANFLVARHVRHTLCSECNGLAGDTF 59

Query: 594  SGVDFRHIQTPCRXXXXXXXXXXXXXXXXXXXXXXXXFTKSKKINSVQKKIVSENXXXXX 773
             GV F+  +  CR                         T     ++ +K  VS       
Sbjct: 60   FGVGFQPHRLICRSCSSEVESETSTDHDSKSSSSPCVSTTE---SAPRKGGVSRRKAERT 116

Query: 774  XXXXXXXPVKVSNREIVKK---ESVLEVKAKGILVNWCRKLGVATMSSTSLALQVFSISL 944
                    V   +     K    S ++ KA+ ILVNWCRKLG+   S TS+A     + L
Sbjct: 117  GFTSSVSAVSGVDSRFPSKLRARSSVDAKAEDILVNWCRKLGL-NGSCTSVASHALGVCL 175

Query: 945  RKFTNLPFRVCLVSSFWLSIKLQGATAMYAFQILKRLEQISGVPAKLILLAENRLSRVLR 1124
             K T LP RV LV++   + KL G  + Y  Q LKRL +ISGVPAKLIL AE++L+RVL+
Sbjct: 176  VKLTVLPLRVSLVAAISCAAKLSGDRSAYTPQNLKRLVEISGVPAKLILAAESKLARVLK 235

Query: 1125 INRRSK---VDMKEGWDECS 1175
            + RR      D +EGW ECS
Sbjct: 236  MERRRPRHVRDREEGWAECS 255


>gb|ADN87331.1| zinc finger protein-like protein [Vitis vinifera]
          Length = 260

 Score =  171 bits (434), Expect = 3e-40
 Identities = 113/260 (43%), Positives = 140/260 (53%), Gaps = 6/260 (2%)
 Frame = +3

Query: 414  MKDKVTCELCNVEASLYCMSDSAFLCYNCDARVHEANFLVARHVRRTICSICKRFDGNHV 593
            MK +V CELCN EASLYC SDSAFLC++CDARVH ANFLVARHVR T+CS C    G+  
Sbjct: 1    MKGRV-CELCNEEASLYCGSDSAFLCWSCDARVHGANFLVARHVRHTLCSECNGLAGDTF 59

Query: 594  SGVDFRHIQTPCRXXXXXXXXXXXXXXXXXXXXXXXXFTKSKKINSVQKKIVSENXXXXX 773
             GV F+  +  CR                         T     ++ +K  VS       
Sbjct: 60   FGVGFQPHRLICRSCSSEVESETSTDHDSKSSSSSCVSTTE---SAPRKGGVSRRKAERT 116

Query: 774  XXXXXXXPVKVSNREIVKK---ESVLEVKAKGILVNWCRKLGVATMSSTSLALQVFSISL 944
                    V   +     K    S ++ KA+ ILVNWCRKLG+   S TS+A     + L
Sbjct: 117  GFTSSVSAVSGVDSRFPSKLRARSSVDAKAEDILVNWCRKLGL-NGSCTSVASHALGVCL 175

Query: 945  RKFTNLPFRVCLVSSFWLSIKLQGATAMYAFQILKRLEQISGVPAKLILLAENRLSRVLR 1124
             K T LP RV LV++   + KL G  + Y  Q LKRL +ISGVPAKLIL AE++L+RVL+
Sbjct: 176  VKLTVLPLRVSLVAAISCAAKLSGDRSAYTPQNLKRLVEISGVPAKLILAAESKLARVLK 235

Query: 1125 INRRSK---VDMKEGWDECS 1175
            + RR      D  EGW ECS
Sbjct: 236  MERRRPRHVRDRVEGWAECS 255


>ref|XP_003530172.1| PREDICTED: uncharacterized protein LOC100781783 [Glycine max]
            gi|347666428|gb|AEP17825.1| B-box 53 protein [Expression
            vector pMON98939]
          Length = 243

 Score =  146 bits (368), Expect = 1e-32
 Identities = 96/254 (37%), Positives = 127/254 (50%), Gaps = 2/254 (0%)
 Frame = +3

Query: 414  MKDKVTCELCNVEASLYCMSDSAFLCYNCDARVHEANFLVARHVRRTICSICKRFDGNHV 593
            MK K TCELC+  ASLYC SDSAFLC++CDA VH ANFLVARH+RR +CS C RF   H+
Sbjct: 1    MKPK-TCELCHQLASLYCPSDSAFLCFHCDAAVHAANFLVARHLRRLLCSKCNRFAAIHI 59

Query: 594  SGVDFRHIQTPCRXXXXXXXXXXXXXXXXXXXXXXXXFT-KSKKINSVQKKIVSENXXXX 770
            SG   RH+ + C                          +  + +I + +K+         
Sbjct: 60   SGAISRHLSSTCTSCSLEIPSADSDSLPSSSTCVSSSESCSTNQIKAEKKRRRRRRSFSS 119

Query: 771  XXXXXXXXPVKVSNREIVKKESVLEVKAKGILVNWCRKLGVAT-MSSTSLALQVFSISLR 947
                    P     R      SV EV  K     W R++G+   ++   +A    S+ L 
Sbjct: 120  SSVTDDASPAAKKRRR--NGGSVAEVFEK-----WSREIGLGLGVNGNRVASNALSVCLG 172

Query: 948  KFTNLPFRVCLVSSFWLSIKLQGATAMYAFQILKRLEQISGVPAKLILLAENRLSRVLRI 1127
            K+ +LPFRV   +SFWL ++  G   +   Q L RLE ISGVPAKLIL A   L+RV   
Sbjct: 173  KWRSLPFRVAAATSFWLGLRFCGDRGLATCQNLARLEAISGVPAKLILGAHANLARVFTH 232

Query: 1128 NRRSKVDMKEGWDE 1169
             R    +++EGW E
Sbjct: 233  RR----ELQEGWGE 242


>gb|AEP17822.1| B-box 52 protein [Expression vector pMON108080]
          Length = 241

 Score =  145 bits (365), Expect = 3e-32
 Identities = 94/256 (36%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
 Frame = +3

Query: 414  MKDKVTCELCNVEASLYCMSDSAFLCYNCDARVHEANFLVARHVRRTICSICKRFDGNHV 593
            MK K TCELC+ +ASLYC SDSAFLC +CDA VH ANFLVARH+RR +CS C RF G H+
Sbjct: 1    MKGK-TCELCDQQASLYCPSDSAFLCSDCDAAVHAANFLVARHLRRLLCSKCNRFAGFHI 59

Query: 594  -SGVDFRHIQTPCRXXXXXXXXXXXXXXXXXXXXXXXXFTKSKKINSVQKKIVSENXXXX 770
             SG   RH+ + C                          + S+  ++ Q K+  +     
Sbjct: 60   SSGAISRHLSSTC---SSCSPENPSADYSDSLPSSSTCVSSSESCSTKQIKVEKKRSWSG 116

Query: 771  XXXXXXXXPVKVSNREIVKKESVLEVKAKGILVNWCRKLGVAT---MSSTSLALQVFSIS 941
                    P     +     E V E         W R++G+     ++   +A    S+ 
Sbjct: 117  SSVTDDASPAAKKRQRSGGSEEVFE--------KWSREIGLGLGLGVNGNRVASNALSVC 168

Query: 942  LRKFTNLPFRVCLVSSFWLSIKLQGATAMYAFQILKRLEQISGVPAKLILLAENRLSRVL 1121
            L K+  LPFRV   +SFWL ++  G   + + Q L RLE ISGVP KLIL A   L+RV 
Sbjct: 169  LGKWRWLPFRVAAATSFWLGLRFCGDRGLASCQNLARLEAISGVPVKLILAAHGDLARVF 228

Query: 1122 RINRRSKVDMKEGWDE 1169
               R    +++EGW E
Sbjct: 229  THRR----ELQEGWGE 240


>ref|XP_002316440.1| predicted protein [Populus trichocarpa] gi|222865480|gb|EEF02611.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  140 bits (353), Expect = 8e-31
 Identities = 89/253 (35%), Positives = 129/253 (50%), Gaps = 5/253 (1%)
 Frame = +3

Query: 432  CELCNVEASLYCMSDSAFLCYNCDARVHEANFLVARHVRRTICSICKRFDGNHVSGVDFR 611
            CELC  EA +YC SD+A+LC++CD+ VH ANFLVARH RR ICS C    GN  SG    
Sbjct: 6    CELCRREAGVYCDSDAAYLCFDCDSNVHNANFLVARHARRVICSGCGSITGNPFSG---- 61

Query: 612  HIQTPCRXXXXXXXXXXXXXXXXXXXXXXXXFTKSKKINSVQKKIVSENXXXXXXXXXXX 791
               TP                             S  I+S +     EN           
Sbjct: 62   --HTPSLSRVTCCSCSPGNKELDSISCSSSSTLSSACISSTETTRF-ENTRKGVKATSSS 118

Query: 792  XPVKV----SNREIVKKESVLEVKAKGILVNWCRKLGVATMSSTSLALQVFSISLRKFTN 959
              VK     S R+ +K+   L  +++G+ VNWC++LG+        A +  ++   +   
Sbjct: 119  SSVKNIPGRSLRDRLKRSRNL--RSEGVFVNWCKRLGLNGNLVVQRATRAMALCFGRLA- 175

Query: 960  LPFRVCLVSSFWLSIKLQGATAMYAFQILKRLEQISGVPAKLILLAENRLSRVLRINR-R 1136
            LPFRV L +SFW  ++L G  ++  ++ L+RLE++SGVP KLI+  E ++ + LR  R +
Sbjct: 176  LPFRVSLAASFWFGLRLCGDKSVTTWENLRRLEEVSGVPNKLIVTVEMKIEQALRSKRLQ 235

Query: 1137 SKVDMKEGWDECS 1175
             + +M+EGW ECS
Sbjct: 236  LQKEMEEGWAECS 248


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