BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005280
         (2000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...   865   0.0  
ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation...   836   0.0  
ref|XP_002509464.1| eukaryotic translation initiation factor 3 s...   832   0.0  
ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation...   827   0.0  
ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation...   820   0.0  

>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Vitis vinifera]
          Length = 567

 Score =  865 bits (2236), Expect = 0.0
 Identities = 437/563 (77%), Positives = 470/563 (83%), Gaps = 1/563 (0%)
 Frame = -2

Query: 1948 FEIGTVPFNPDGWGPPETPSTLLSNHPNNVPFAPFNRSDKLGRIADWTXXXXXXXXXXXN 1769
            FE+G VPFNPDGWGPPE+ S  L NHP NVPFAPF+RSDKLGRIADWT            
Sbjct: 5    FEVGAVPFNPDGWGPPESASPHLPNHPINVPFAPFSRSDKLGRIADWTRTYNNPSRNPLR 64

Query: 1768 KTPISDSPFLLEDDVASGFP-DDDSTFRLVDXXXXXXXXXXXXXXFQQQRQLPQXXXXXX 1592
                S   F  +D   +G   D+DS+FRLVD              FQQQRQLPQ      
Sbjct: 65   NPSDSVFDFTGDDSFGAGIAADEDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEV 124

Query: 1591 XXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQIPFSTFTKMS 1412
                           RLYN NR+G N  RREAAVFKSSVDIQPEW MLDQIPFSTF+K+S
Sbjct: 125  EARKREAEKERARRDRLYNLNRSGGNNQRREAAVFKSSVDIQPEWNMLDQIPFSTFSKLS 184

Query: 1411 FAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDPVIRRLANEDK 1232
            F+V EPEDLL+CG LE+YD++YDRV PK+E+RLERFKNRNFFKVTTTDDPVIRRLANEDK
Sbjct: 185  FSVPEPEDLLLCGALEFYDRSYDRVTPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDK 244

Query: 1231 ATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLPEA 1052
            ATVFATD+ILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSV+ETSQEPLPEA
Sbjct: 245  ATVFATDSILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEA 304

Query: 1051 KEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVASAAYRYRRWKL 872
            KEDINSAYSLSVEAAYINQNFSQQVL+RDGNKVTFEE NPFA+EGEEVAS AYRYRRWKL
Sbjct: 305  KEDINSAYSLSVEAAYINQNFSQQVLIRDGNKVTFEEPNPFANEGEEVASVAYRYRRWKL 364

Query: 871  DNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQRGAVLATELKN 692
            D+DMYLVARCEVQS +EV  ++SF+TLNALNEFDPKYSGVDWR+KLETQRGAVLATELKN
Sbjct: 365  DDDMYLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKN 424

Query: 691  NANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFAMQINLNTSNM 512
            NANKLAKWTAQ+LLASAD+MKLGYVSR+HPRDHFNHVIL VVGYKPREFA QINLNT+NM
Sbjct: 425  NANKLAKWTAQALLASADLMKLGYVSRVHPRDHFNHVILAVVGYKPREFAAQINLNTTNM 484

Query: 511  WGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPTE 332
            WGI+KSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP  
Sbjct: 485  WGIIKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPA- 543

Query: 331  EEANAGEAAVPANDAEDKEVVAE 263
            EEAN GEA     D E+KEV AE
Sbjct: 544  EEANGGEANAAITDVEEKEVTAE 566


>ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            isoform 1 [Glycine max] gi|356555340|ref|XP_003545991.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit D-like isoform 2 [Glycine max]
          Length = 565

 Score =  836 bits (2159), Expect = 0.0
 Identities = 422/562 (75%), Positives = 461/562 (82%), Gaps = 2/562 (0%)
 Frame = -2

Query: 1951 AFEIGTVPFNPDGWGPPETPSTLLSNH--PNNVPFAPFNRSDKLGRIADWTXXXXXXXXX 1778
            AF+IG VPFN DGWGPP+  ++  +N+  P NVPFAPF+RSDKLGRIADWT         
Sbjct: 4    AFDIGAVPFNADGWGPPDNATSGSNNNNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRS 63

Query: 1777 XXNKTPISDSPFLLEDDVASGFPDDDSTFRLVDXXXXXXXXXXXXXXFQQQRQLPQXXXX 1598
                  + D      DD      DDD++FRLVD              FQQQRQLPQ    
Sbjct: 64   KNPADAVFD---FANDDSFPASADDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDE 120

Query: 1597 XXXXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQIPFSTFTK 1418
                             RLY+ NR+  NQ RREAAVFKSSVDIQPEW M DQIPFSTF+K
Sbjct: 121  EVEAKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSK 180

Query: 1417 MSFAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDPVIRRLANE 1238
            +SF V EPEDLL+CG LEYYD+TYDR+ PK+E+RLERFKNRNFFKVTTTDDPVIRRLANE
Sbjct: 181  LSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANE 240

Query: 1237 DKATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLP 1058
            DKATVFATD ILSTLMCAPRSVYSWDIV+QRVGNKLFFDKRDGSQLDLLSV+ETSQEPLP
Sbjct: 241  DKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLP 300

Query: 1057 EAKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVASAAYRYRRW 878
            E+K+DINSA+SLSVEAAYINQNFSQQVL+RDGNKVTF+E NPFA+EGEEVAS AYRYRRW
Sbjct: 301  ESKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRW 360

Query: 877  KLDNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQRGAVLATEL 698
            KLD+DMYLVARCEV S ++V  ++SF+TLNALNEFDPKYSGVDWR+KLETQRGAVLATEL
Sbjct: 361  KLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATEL 420

Query: 697  KNNANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFAMQINLNTS 518
            KNNANKLAKWTAQ+LLASAD MKLGYVSRIHPRDHFNHVIL VVGYKPR+FA QINLNT+
Sbjct: 421  KNNANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTT 480

Query: 517  NMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP 338
            NMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP
Sbjct: 481  NMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP 540

Query: 337  TEEEANAGEAAVPANDAEDKEV 272
              E A  GEAA   ND EDK++
Sbjct: 541  A-EGAEGGEAAATTNDVEDKQI 561


>ref|XP_002509464.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223549363|gb|EEF50851.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 574

 Score =  832 bits (2149), Expect = 0.0
 Identities = 424/570 (74%), Positives = 467/570 (81%), Gaps = 13/570 (2%)
 Frame = -2

Query: 1954 MAFEIGTVPFNPDGWGPPE----TPSTLLSNHPNNVPFAPFNRSDKLGRIADWTXXXXXX 1787
            + FE+G VPFNPDGWGPP+    + +T  S  P NVPFAPF+RSDKLGRIADWT      
Sbjct: 2    VGFEVGFVPFNPDGWGPPDAAFASAATTTSTLPLNVPFAPFSRSDKLGRIADWTRNINPN 61

Query: 1786 XXXXXNKTPISDSPFLLEDD----VASGFPDDDSTFRLVDXXXXXXXXXXXXXXFQQQRQ 1619
                 +K   SDS F    D     A+   DDDSTFRLVD              F Q RQ
Sbjct: 62   ANRPNSKQNASDSVFDFTADDSFPAATAAGDDDSTFRLVDGKPPPRPKFGPKWRFNQHRQ 121

Query: 1618 -LPQXXXXXXXXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQ 1442
             LPQ                     RLYN NR+  NQPRREAAVFKSSVDIQPEW MLDQ
Sbjct: 122  QLPQRRDEEVEARKREAEKERARRDRLYNMNRSNQNQPRREAAVFKSSVDIQPEWNMLDQ 181

Query: 1441 IPFSTFTKMSFAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDP 1262
            IPFSTF+K+SF+V EPEDLL+CGGLE+YD+++DR+ PK+E+RLERFKNRNFFKVTTTDDP
Sbjct: 182  IPFSTFSKLSFSVPEPEDLLLCGGLEFYDRSFDRITPKNERRLERFKNRNFFKVTTTDDP 241

Query: 1261 VIRRLANEDKATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVN 1082
            VIRRLANEDKATVFATD IL+TLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSV+
Sbjct: 242  VIRRLANEDKATVFATDTILATLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVH 301

Query: 1081 ETSQEPLPEAKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVAS 902
            ETSQEPLPEAK+D+NSAYSLSVEAAYINQNFSQQVL+RDGNKV+F+E NPFA+EGEEVAS
Sbjct: 302  ETSQEPLPEAKDDMNSAYSLSVEAAYINQNFSQQVLIRDGNKVSFDEPNPFATEGEEVAS 361

Query: 901  AAYRYRRWKLDNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQR 722
             AYRYRRWKLD+DM+LVARCEVQS +EV  ++SF+TLNALNEFDPKYSGVDWR+KLETQR
Sbjct: 362  VAYRYRRWKLDDDMHLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQR 421

Query: 721  GAVLATELKNNANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFA 542
            GAVLATELKNNANKLAKWTAQ+LLASAD+MKLGYVSR+HPRDH+NHVIL VVGYKPR+FA
Sbjct: 422  GAVLATELKNNANKLAKWTAQALLASADLMKLGYVSRVHPRDHYNHVILAVVGYKPRDFA 481

Query: 541  MQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLP 362
             QINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLP
Sbjct: 482  AQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLP 541

Query: 361  EDEQVQPPTEE----EANAGEAAVPANDAE 284
            E+EQVQPP E+    EAN G   V A D +
Sbjct: 542  EEEQVQPPGEDTENAEANGGTVDVEAKDID 571


>ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Glycine max]
          Length = 557

 Score =  827 bits (2135), Expect = 0.0
 Identities = 421/561 (75%), Positives = 461/561 (82%), Gaps = 1/561 (0%)
 Frame = -2

Query: 1951 AFEIGTVPFNPDGWGPPETPSTLLS-NHPNNVPFAPFNRSDKLGRIADWTXXXXXXXXXX 1775
            AF+IG VPFN +GWGPP++  T  + N P NVPFAPF+RSDKLGRIADWT          
Sbjct: 4    AFDIGAVPFNAEGWGPPDSTITGSNINLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRS- 62

Query: 1774 XNKTPISDSPFLLEDDVASGFPDDDSTFRLVDXXXXXXXXXXXXXXFQQQRQLPQXXXXX 1595
              K P +D+ F   +D      DDD TF LVD              F QQRQLPQ     
Sbjct: 63   --KNP-ADAVFDFTND------DDDDTFHLVDPKPPPRPKFGPKWRFPQQRQLPQRRDEE 113

Query: 1594 XXXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQIPFSTFTKM 1415
                            RLY+ NR+  NQ RREAAVFKSSVDIQPEW M DQIPFSTF+K+
Sbjct: 114  VEAKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKL 173

Query: 1414 SFAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDPVIRRLANED 1235
            SF V EPEDLL+CG LEYYD+TYDR+ PK+E+RLERFKNRNFFKVTTTDDP+IRRLANED
Sbjct: 174  SFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPIIRRLANED 233

Query: 1234 KATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLPE 1055
            KATVFATD ILSTLMCAPRSVYSWDIV+QRVGNKLFFDKRDGSQLDLLSV+ETSQEPLPE
Sbjct: 234  KATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPE 293

Query: 1054 AKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVASAAYRYRRWK 875
            +K+DINSA+SLSVEAAYINQNFSQQVL+RDGNKVTF+E NPFA+EGEEVAS AYRYRRWK
Sbjct: 294  SKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWK 353

Query: 874  LDNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQRGAVLATELK 695
            LD+DMYLVARCEV S ++V  ++SF+TLNALNEFDPKYSGVDWR+KLETQRGAVLATELK
Sbjct: 354  LDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELK 413

Query: 694  NNANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFAMQINLNTSN 515
            NNANKLAKWTAQ+LLASAD MKLGYVSRIHPRDHFNHVIL VVGYKPR+FA QINLNT+N
Sbjct: 414  NNANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTN 473

Query: 514  MWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPT 335
            MWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP+
Sbjct: 474  MWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPS 533

Query: 334  EEEANAGEAAVPANDAEDKEV 272
             E A  GEA    ND EDK++
Sbjct: 534  -EGAEGGEATTTTNDVEDKQI 553


>ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Cucumis sativus] gi|449506762|ref|XP_004162841.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit D-like [Cucumis sativus]
          Length = 566

 Score =  820 bits (2119), Expect = 0.0
 Identities = 422/561 (75%), Positives = 464/561 (82%), Gaps = 4/561 (0%)
 Frame = -2

Query: 1948 FEIGTVPFNPDGWGPPETPSTLL--SNHPNNVPFAPFNRSDKLGRIADWTXXXXXXXXXX 1775
            FE+G VP+NPDGWGPP++ +TL+  SN P NVPFAPF+RSDKLGRIADWT          
Sbjct: 5    FEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRP- 63

Query: 1774 XNKTPISDSPF-LLEDDVASGFPDDDSTFRLVDXXXXXXXXXXXXXXFQQQR-QLPQXXX 1601
              KT  SDS F    DD      D+D +FRLVD              F QQR QLPQ   
Sbjct: 64   --KTA-SDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRD 120

Query: 1600 XXXXXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQIPFSTFT 1421
                              RLYN NR+  N PRREAAVFKSSV+IQPEW MLDQIPFSTF+
Sbjct: 121  EEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFS 180

Query: 1420 KMSFAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDPVIRRLAN 1241
            K+SF+V EPEDLL+CGGLE+YD+ YDR+ PK+E+RLERFKNRNFFKVTTTDDPVIRRLAN
Sbjct: 181  KLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLAN 240

Query: 1240 EDKATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPL 1061
            EDKATVFATDAILSTLMCA RSVYSWDIV+QRVGNKLFFDKRDGSQLDLL+V+ETSQEPL
Sbjct: 241  EDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPL 300

Query: 1060 PEAKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVASAAYRYRR 881
            PEAK+DINSAYSLSVEAAYINQNFSQQVLVRDGNKV F+E NPFA+EGEEVAS AYRYRR
Sbjct: 301  PEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRR 360

Query: 880  WKLDNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQRGAVLATE 701
            WKLD+DMYLVARCEVQS +EV  ++SF+TLNALNEFDPKYSGVDWR+KLETQRGAVLATE
Sbjct: 361  WKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATE 420

Query: 700  LKNNANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFAMQINLNT 521
            LKNNANKLAKWTAQ+LLASAD+MKLGYVSR+HPRDHFNHVIL VVGYKP++FA QINLNT
Sbjct: 421  LKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAGQINLNT 480

Query: 520  SNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQP 341
            SNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPL E++QVQP
Sbjct: 481  SNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQP 540

Query: 340  PTEEEANAGEAAVPANDAEDK 278
            P E+E N        +DAE+K
Sbjct: 541  PAEDE-NGVTPNAATDDAEEK 560