BLASTX nr result

ID: Coptis21_contig00005273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005273
         (1840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267825.1| PREDICTED: fasciclin-like arabinogalactan pr...   472   e-130
gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossyp...   459   e-127
gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium ...   457   e-126
ref|XP_004148925.1| PREDICTED: fasciclin-like arabinogalactan pr...   453   e-125
ref|XP_002320524.1| fasciclin-like arabinogalactan protein [Popu...   442   e-121

>ref|XP_002267825.1| PREDICTED: fasciclin-like arabinogalactan protein 1-like [Vitis
            vinifera]
          Length = 405

 Score =  472 bits (1214), Expect = e-130
 Identities = 234/310 (75%), Positives = 268/310 (86%)
 Frame = -1

Query: 1396 TSAHNITKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLPVFA 1217
            T AHNIT ILAK+PEFSTFNHYLT+THLA+EIN RETITVCAVDN GMSDLL+K L ++A
Sbjct: 26   TEAHNITSILAKNPEFSTFNHYLTVTHLANEINLRETITVCAVDNPGMSDLLAKGLSIYA 85

Query: 1216 IKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGFGA 1037
            IKNVLSLHILLDYFGAKKLHQITNGTALAATM+QATG+APGS+GFVN+TDLKGGKVGFGA
Sbjct: 86   IKNVLSLHILLDYFGAKKLHQITNGTALAATMYQATGSAPGSSGFVNITDLKGGKVGFGA 145

Query: 1036 EDNGGALDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXSQLNLTALMTKKGCKVF 857
              N G L A++VKSV+EIPYNISVIQISKIL            S+ NLTALM+  GCKVF
Sbjct: 146  GGNDGDLTATFVKSVEEIPYNISVIQISKILPSEEAEAPTPGPSEQNLTALMSAHGCKVF 205

Query: 856  ADLLIATGALTTFEDNADGGLTVFCPLDSVINGFMPKYKNLSTEGKGSLLLYHGVPVYSS 677
            AD L+A+ A  T+EDN +GGLTVFCP+D V   F+PKYKNL+ +GK SLLLYHG+PVY S
Sbjct: 206  ADTLVASDAQKTYEDNLEGGLTVFCPMDDVFKSFLPKYKNLTADGKLSLLLYHGIPVYQS 265

Query: 676  MAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYTIN 497
            +++LKS+NG+MNTLATDG  KYDFTVQNDG VVTLKTK+VTAR+TGTLLDEQPL I+TI+
Sbjct: 266  LSLLKSSNGVMNTLATDGAKKYDFTVQNDGEVVTLKTKIVTARITGTLLDEQPLGIFTID 325

Query: 496  KVLMPKELFK 467
            KVL+PKELFK
Sbjct: 326  KVLLPKELFK 335


>gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossypium hirsutum]
          Length = 398

 Score =  459 bits (1182), Expect = e-127
 Identities = 223/310 (71%), Positives = 265/310 (85%)
 Frame = -1

Query: 1396 TSAHNITKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLPVFA 1217
            ++AHNIT+ILAKHPEFSTFNHYLT+THLA EINRRETITV A++NA MS LLSK L ++ 
Sbjct: 19   SNAHNITRILAKHPEFSTFNHYLTLTHLASEINRRETITVLALNNAAMSSLLSKQLSLYT 78

Query: 1216 IKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGFGA 1037
            +KNVLSLH+L+DYFG+KKLHQITNGTAL +TMFQA+GAAPGS+G++N+TDLKGGKVGFGA
Sbjct: 79   LKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGYINITDLKGGKVGFGA 138

Query: 1036 EDNGGALDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXSQLNLTALMTKKGCKVF 857
            E+N G LDA YVKSV EIPYNISV+QIS++L            S+LNLT +M+K+GCK F
Sbjct: 139  ENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSKLNLTEIMSKQGCKSF 198

Query: 856  ADLLIATGALTTFEDNADGGLTVFCPLDSVINGFMPKYKNLSTEGKGSLLLYHGVPVYSS 677
            ADLLI++GA  TF +N DGGLTVFCP D VI  FMPKYKNL+   K SLLLYHGVPVY S
Sbjct: 199  ADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTASKKASLLLYHGVPVYQS 258

Query: 676  MAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYTIN 497
            M MLKSNNG+MNTLATDG NKYDFT+QNDG VVTL+TK++TA++TGTL DE+PL +Y IN
Sbjct: 259  MQMLKSNNGIMNTLATDGANKYDFTIQNDGEVVTLETKVMTAKITGTLKDEEPLIVYKIN 318

Query: 496  KVLMPKELFK 467
            KVL+P+EL+K
Sbjct: 319  KVLLPRELYK 328


>gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium hirsutum]
          Length = 397

 Score =  457 bits (1177), Expect = e-126
 Identities = 222/310 (71%), Positives = 265/310 (85%)
 Frame = -1

Query: 1396 TSAHNITKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLPVFA 1217
            ++AHNIT+ILAK+PEFSTFNHYLT+THLA EINRRETITV A++NA MS LLSK L ++ 
Sbjct: 18   SNAHNITRILAKNPEFSTFNHYLTLTHLASEINRRETITVLALNNAAMSSLLSKQLSLYT 77

Query: 1216 IKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGFGA 1037
            +KNVLSLH+L+DYFG+KKLHQITNGTAL +TMFQA+GAAPGS+G++N+TDLKGGKVGFGA
Sbjct: 78   LKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGYINITDLKGGKVGFGA 137

Query: 1036 EDNGGALDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXSQLNLTALMTKKGCKVF 857
            E+N G LDA YVKSV EIPYNISV+QIS++L            S+LNLT +M+K+GCK F
Sbjct: 138  ENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSKLNLTEIMSKQGCKAF 197

Query: 856  ADLLIATGALTTFEDNADGGLTVFCPLDSVINGFMPKYKNLSTEGKGSLLLYHGVPVYSS 677
            ADLLI++GA  TF +N DGGLTVFCP D VI  FMPKYKNL+   K SLLLYHGVPVY S
Sbjct: 198  ADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTASKKASLLLYHGVPVYQS 257

Query: 676  MAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYTIN 497
            M MLKSNNG+MNTLATDG NKYDFT+QNDG VVTL+TK++TA++TGTL DE+PL +Y IN
Sbjct: 258  MQMLKSNNGIMNTLATDGANKYDFTIQNDGEVVTLETKVMTAKITGTLKDEEPLIVYKIN 317

Query: 496  KVLMPKELFK 467
            KVL+P+EL+K
Sbjct: 318  KVLLPRELYK 327


>ref|XP_004148925.1| PREDICTED: fasciclin-like arabinogalactan protein 1-like [Cucumis
            sativus] gi|449527723|ref|XP_004170859.1| PREDICTED:
            fasciclin-like arabinogalactan protein 1-like [Cucumis
            sativus]
          Length = 415

 Score =  453 bits (1166), Expect = e-125
 Identities = 223/312 (71%), Positives = 263/312 (84%)
 Frame = -1

Query: 1402 ADTSAHNITKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLPV 1223
            A  +AHNITK+L KHPEFSTFNHYLT THLA EINRR TITVC VDN+ MSDLL+K L +
Sbjct: 24   ATATAHNITKLLEKHPEFSTFNHYLTTTHLAPEINRRTTITVCVVDNSAMSDLLAKQLSI 83

Query: 1222 FAIKNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGF 1043
            ++IKN LSLH+LLDYFGAKKLHQITNGTALAATMFQATG+APGS+GFVN+TDLKGGKVGF
Sbjct: 84   YSIKNTLSLHVLLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITDLKGGKVGF 143

Query: 1042 GAEDNGGALDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXSQLNLTALMTKKGCK 863
            G +D+   +DA YVKSV+E+PYNIS+IQISKIL            S++NLT +M+  GCK
Sbjct: 144  GLQDSDD-IDAMYVKSVEEVPYNISIIQISKILPSQVAEAPTPSPSEMNLTGIMSAHGCK 202

Query: 862  VFADLLIATGALTTFEDNADGGLTVFCPLDSVINGFMPKYKNLSTEGKGSLLLYHGVPVY 683
            VFA+ L A+ A+ TF++NA GGLTVFCPLD V   F+PKYKNL+  GK SLL YHG+PVY
Sbjct: 203  VFAETLQASDAVKTFQENAIGGLTVFCPLDDVFKAFLPKYKNLTAAGKISLLEYHGLPVY 262

Query: 682  SSMAMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYT 503
            +SM+MLKSNNG+ NTLATDG NKYDF +QNDG VVTL+TK+VTA++TGTLLDEQP+AIYT
Sbjct: 263  NSMSMLKSNNGITNTLATDGANKYDFVIQNDGEVVTLQTKVVTAKITGTLLDEQPVAIYT 322

Query: 502  INKVLMPKELFK 467
            I+KVL P+ELFK
Sbjct: 323  IDKVLKPRELFK 334


>ref|XP_002320524.1| fasciclin-like arabinogalactan protein [Populus trichocarpa]
            gi|222861297|gb|EEE98839.1| fasciclin-like
            arabinogalactan protein [Populus trichocarpa]
          Length = 344

 Score =  442 bits (1137), Expect = e-121
 Identities = 212/309 (68%), Positives = 260/309 (84%)
 Frame = -1

Query: 1393 SAHNITKILAKHPEFSTFNHYLTITHLADEINRRETITVCAVDNAGMSDLLSKHLPVFAI 1214
            +AHNIT+ILAKHP+FSTFNHYLT+THLA EINRR+TITV A+DNA MS L+SK L V+ +
Sbjct: 15   NAHNITRILAKHPQFSTFNHYLTVTHLAAEINRRQTITVLALDNAAMSSLISKQLSVYTL 74

Query: 1213 KNVLSLHILLDYFGAKKLHQITNGTALAATMFQATGAAPGSTGFVNVTDLKGGKVGFGAE 1034
            +NVLSLH+L+DYFG +KLHQITNGT L ATMFQATG+APG++G+VN+TDL GGKV FGAE
Sbjct: 75   RNVLSLHVLVDYFGTRKLHQITNGTELTATMFQATGSAPGASGYVNITDLNGGKVAFGAE 134

Query: 1033 DNGGALDASYVKSVQEIPYNISVIQISKILXXXXXXXXXXXXSQLNLTALMTKKGCKVFA 854
            DN G L+A YVKS++EIPYNIS++QIS+ L              LN+TA+++ +GCK F+
Sbjct: 135  DNDGKLNAVYVKSLEEIPYNISILQISQPL-NSAEAEAPTAAPTLNVTAILSNQGCKAFS 193

Query: 853  DLLIATGALTTFEDNADGGLTVFCPLDSVINGFMPKYKNLSTEGKGSLLLYHGVPVYSSM 674
            DLLIA+GA TTFE+N DGGLTVFCP D VINGFMPKYKNL+   K SLLLYHG+P+Y S+
Sbjct: 194  DLLIASGAHTTFEENVDGGLTVFCPTDPVINGFMPKYKNLTAPQKVSLLLYHGIPIYQSL 253

Query: 673  AMLKSNNGLMNTLATDGVNKYDFTVQNDGAVVTLKTKLVTARLTGTLLDEQPLAIYTINK 494
             MLK++NG+MNTLAT+G NKYDFTVQNDG VVTL+TK+ TA +TGT+ DE+PL +Y INK
Sbjct: 254  QMLKTSNGIMNTLATNGANKYDFTVQNDGEVVTLETKVTTATITGTVKDEEPLVVYKINK 313

Query: 493  VLMPKELFK 467
            VL+P+ELFK
Sbjct: 314  VLLPRELFK 322


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