BLASTX nr result
ID: Coptis21_contig00005271
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005271 (658 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo... 225 6e-57 ref|XP_004137872.1| PREDICTED: ribosome production factor 2 homo... 206 3e-51 gb|AFC90090.1| brix domain-containing protein [Nicotiana bentham... 204 9e-51 ref|XP_002528588.1| brix domain containing protein, putative [Ri... 204 2e-50 ref|XP_004161267.1| PREDICTED: ribosome production factor 2 homo... 202 6e-50 >ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera] gi|297740066|emb|CBI30248.3| unnamed protein product [Vitis vinifera] Length = 315 Score = 225 bits (573), Expect = 6e-57 Identities = 107/142 (75%), Positives = 123/142 (86%) Frame = +3 Query: 21 VIENLNLAGVDRVFVCTAVSSKKVFLTHCALRLKRSGTVVPRMELVEVGPSMDLVMRRHR 200 V+ENLNLAG+D ++CTAVSS +VF THCA+RLK+SGT+VPRMELVEVGPSMDLV+RRHR Sbjct: 174 VVENLNLAGLDHAYICTAVSSNRVFFTHCAMRLKKSGTIVPRMELVEVGPSMDLVVRRHR 233 Query: 201 LPNDGLRKEAMKTSLEKPKKKVKNVSSDIIQGKVGKIYIPDQQVGGMELSYNAKGLKRER 380 LPND +RKEAMKT+ E+PKKKVKNVS D+IQGKVGKIY+PDQQVG + L Y AKGLKRER Sbjct: 234 LPNDSVRKEAMKTAKEQPKKKVKNVSQDVIQGKVGKIYVPDQQVGSVALPYKAKGLKRER 293 Query: 381 REAKMNKETTSNEPKKQKVDQE 446 REAKM ET PKKQK + E Sbjct: 294 REAKMKHETNDRAPKKQKENSE 315 >ref|XP_004137872.1| PREDICTED: ribosome production factor 2 homolog [Cucumis sativus] Length = 322 Score = 206 bits (524), Expect = 3e-51 Identities = 101/142 (71%), Positives = 118/142 (83%) Frame = +3 Query: 21 VIENLNLAGVDRVFVCTAVSSKKVFLTHCALRLKRSGTVVPRMELVEVGPSMDLVMRRHR 200 V+ENLNL+G+DRV+VCTA+S KVFLTHCALRLK+SG+VVPRMELVEVGPSMD+V+RRHR Sbjct: 174 VVENLNLSGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHR 233 Query: 201 LPNDGLRKEAMKTSLEKPKKKVKNVSSDIIQGKVGKIYIPDQQVGGMELSYNAKGLKRER 380 LP DGLRKEAMKT+ +K KKK KNVS DIIQGK+G+IYIPDQ+VG M + +KG+KRER Sbjct: 234 LPTDGLRKEAMKTAKDKAKKKEKNVSKDIIQGKIGRIYIPDQKVGDMAIVDKSKGVKRER 293 Query: 381 REAKMNKETTSNEPKKQKVDQE 446 REAKM KK K D E Sbjct: 294 REAKMKNRDDGPASKKPKEDSE 315 >gb|AFC90090.1| brix domain-containing protein [Nicotiana benthamiana] Length = 321 Score = 204 bits (520), Expect = 9e-51 Identities = 102/142 (71%), Positives = 118/142 (83%) Frame = +3 Query: 21 VIENLNLAGVDRVFVCTAVSSKKVFLTHCALRLKRSGTVVPRMELVEVGPSMDLVMRRHR 200 V+ NLNLAG+D V++CT VS KKVFLTHCALRLK+SGTVVPR+ELVEVGPSMDLV+RRHR Sbjct: 180 VVTNLNLAGLDCVYLCTVVSPKKVFLTHCALRLKKSGTVVPRIELVEVGPSMDLVVRRHR 239 Query: 201 LPNDGLRKEAMKTSLEKPKKKVKNVSSDIIQGKVGKIYIPDQQVGGMELSYNAKGLKRER 380 LP+D L+KEAMKTSL+K KKK KNV D IQGK GKIYIPDQ+VG + L + AKG+KRER Sbjct: 240 LPDDSLKKEAMKTSLDKAKKKEKNVVKDAIQGKYGKIYIPDQKVGSVALPHKAKGVKRER 299 Query: 381 REAKMNKETTSNEPKKQKVDQE 446 REAK+ E KKQK+D E Sbjct: 300 REAKLKHVRDQPEEKKQKLDSE 321 >ref|XP_002528588.1| brix domain containing protein, putative [Ricinus communis] gi|223531984|gb|EEF33796.1| brix domain containing protein, putative [Ricinus communis] Length = 315 Score = 204 bits (518), Expect = 2e-50 Identities = 97/139 (69%), Positives = 118/139 (84%) Frame = +3 Query: 24 IENLNLAGVDRVFVCTAVSSKKVFLTHCALRLKRSGTVVPRMELVEVGPSMDLVMRRHRL 203 +ENLNLAG+DR +VCTA SS +VFLTHCA+RLK+SGTV+PR+EL+EVGPSMDLV+RRHRL Sbjct: 175 VENLNLAGLDRAYVCTATSSNRVFLTHCAIRLKKSGTVIPRIELIEVGPSMDLVVRRHRL 234 Query: 204 PNDGLRKEAMKTSLEKPKKKVKNVSSDIIQGKVGKIYIPDQQVGGMELSYNAKGLKRERR 383 PND LRKEAMKT+ +K KKK+KNVS+D IQGK+G+IYIPDQ++G M L +KG+KRERR Sbjct: 235 PNDSLRKEAMKTAKDKLKKKIKNVSADAIQGKLGRIYIPDQKIGEMALPDKSKGVKRERR 294 Query: 384 EAKMNKETTSNEPKKQKVD 440 EAKM + KKQK D Sbjct: 295 EAKMKNGNNEHASKKQKED 313 >ref|XP_004161267.1| PREDICTED: ribosome production factor 2 homolog [Cucumis sativus] Length = 386 Score = 202 bits (513), Expect = 6e-50 Identities = 98/138 (71%), Positives = 116/138 (84%) Frame = +3 Query: 21 VIENLNLAGVDRVFVCTAVSSKKVFLTHCALRLKRSGTVVPRMELVEVGPSMDLVMRRHR 200 V+ENLNL+G+DRV+VCTA+S KVFLTHCALRLK+SG+VVPRMELVEVGPSMD+V+RRHR Sbjct: 174 VVENLNLSGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHR 233 Query: 201 LPNDGLRKEAMKTSLEKPKKKVKNVSSDIIQGKVGKIYIPDQQVGGMELSYNAKGLKRER 380 LP DGLRKEAMKT+ +K KKK KNVS DIIQGK+G+IYIPDQ+VG M + +KG+KRER Sbjct: 234 LPTDGLRKEAMKTAKDKAKKKEKNVSKDIIQGKIGRIYIPDQKVGDMAIVDKSKGVKRER 293 Query: 381 REAKMNKETTSNEPKKQK 434 REAKM K Q+ Sbjct: 294 REAKMKNRDDGPASKNQR 311