BLASTX nr result

ID: Coptis21_contig00005240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005240
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD72482.1| MRP-like ABC transporter protein [Gossypium barba...    67   1e-09
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...    66   3e-09
emb|CBI39698.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...    65   6e-09
emb|CBI39697.3| unnamed protein product [Vitis vinifera]               65   6e-09

>gb|ABD72482.1| MRP-like ABC transporter protein [Gossypium barbadense]
          Length = 1075

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = +1

Query: 211 LVQTLFRIVEPAAGQIFLDGIDISKIGLHDLRSRLSII 324
           L+QTLFRIVEPAAGQI +DG++IS IGLHDLRSRLSII
Sbjct: 874 LIQTLFRIVEPAAGQIIIDGVNISSIGLHDLRSRLSII 911


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 211  LVQTLFRIVEPAAGQIFLDGIDISKIGLHDLRSRLSII 324
            L+QTLFRIVEPAAGQI +DG +IS IGLHDLRSRLSII
Sbjct: 1814 LIQTLFRIVEPAAGQIMIDGTNISSIGLHDLRSRLSII 1851


>emb|CBI39698.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 211 LVQTLFRIVEPAAGQIFLDGIDISKIGLHDLRSRLSII 324
           L+QTLFRIVEPAAGQI +DG +IS IGLHDLRSRLSII
Sbjct: 625 LIQTLFRIVEPAAGQIMIDGTNISSIGLHDLRSRLSII 662


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 211  LVQTLFRIVEPAAGQIFLDGIDISKIGLHDLRSRLSII 324
            L+QTLFRIVEPAAGQI +DG +IS IGLHDLRSRLSII
Sbjct: 1281 LIQTLFRIVEPAAGQITIDGTNISSIGLHDLRSRLSII 1318


>emb|CBI39697.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 211  LVQTLFRIVEPAAGQIFLDGIDISKIGLHDLRSRLSII 324
            L+QTLFRIVEPAAGQI +DG +IS IGLHDLRSRLSII
Sbjct: 1077 LIQTLFRIVEPAAGQITIDGTNISSIGLHDLRSRLSII 1114


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