BLASTX nr result

ID: Coptis21_contig00005234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005234
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277930.1| PREDICTED: putative DNA-binding protein ESCA...    73   2e-10
emb|CBI31637.3| unnamed protein product [Vitis vinifera]               73   2e-10
ref|XP_002524209.1| ESC, putative [Ricinus communis] gi|22353648...    68   4e-09
emb|CAN75757.1| hypothetical protein VITISV_028561 [Vitis vinifera]    57   9e-06

>ref|XP_002277930.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 327

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = -1

Query: 332 MANRWWTGNVGMGGGDPVSSSPSLHLRNPDDEHGSLGRLGPRREQELMD 186
           M +RWW GNV M   DP+SS+PSLHLRN +D+ G L RLGPRREQE MD
Sbjct: 1   MTHRWWAGNVAMR--DPMSSAPSLHLRNTEDDQGGLNRLGPRREQEFMD 47


>emb|CBI31637.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = -1

Query: 332 MANRWWTGNVGMGGGDPVSSSPSLHLRNPDDEHGSLGRLGPRREQELMD 186
           M +RWW GNV M   DP+SS+PSLHLRN +D+ G L RLGPRREQE MD
Sbjct: 1   MTHRWWAGNVAMR--DPMSSAPSLHLRNTEDDQGGLNRLGPRREQEFMD 47


>ref|XP_002524209.1| ESC, putative [Ricinus communis] gi|223536486|gb|EEF38133.1| ESC,
           putative [Ricinus communis]
          Length = 342

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -1

Query: 332 MANRWWTGNVGMGGGDPVSSSPSLHLRNPDD-EHGSLGRLGPRREQE 195
           MANRWW GNV M G DP+SS+ SLHLRNP++ E   L RLGPRREQ+
Sbjct: 1   MANRWWAGNVAMRGVDPISSASSLHLRNPEEVEAIGLNRLGPRREQQ 47


>emb|CAN75757.1| hypothetical protein VITISV_028561 [Vitis vinifera]
          Length = 293

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = -1

Query: 332 MANRWWTGNVGMGGGDPVSSSPSLHLRNPDDEHGSLGRLGPRR 204
           M +RWW GNV M   DP+SS+PSLHLRN +D+ G L RLG ++
Sbjct: 1   MTHRWWAGNVAMR--DPMSSAPSLHLRNTEDDQGGLNRLGTQK 41


Top