BLASTX nr result

ID: Coptis21_contig00005221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005221
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266452.2| PREDICTED: disease resistance response prote...   177   1e-42
emb|CAN76752.1| hypothetical protein VITISV_009422 [Vitis vinifera]   173   1e-41
ref|XP_002280817.1| PREDICTED: disease resistance response prote...   171   4e-41
emb|CAN61168.1| hypothetical protein VITISV_038109 [Vitis vinifera]   171   4e-41
ref|XP_002297761.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40

>ref|XP_002266452.2| PREDICTED: disease resistance response protein 206-like [Vitis
           vinifera] gi|147821135|emb|CAN62170.1| hypothetical
           protein VITISV_027159 [Vitis vinifera]
           gi|296081293|emb|CBI17737.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/136 (63%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 KVTNFHFFFHDTISGNNPSAIVIAGPKDNSSFGTTRIADEPLTEGPEPTSKLIGKAQGIY 228
           KV++ HF+FHD +SG NP+A  IAGPK    FG T + D+ LTEGPEP+SKL+G+AQG+Y
Sbjct: 40  KVSHLHFYFHDILSGKNPTATQIAGPK-KGHFGVTMMVDDALTEGPEPSSKLLGRAQGLY 98

Query: 227 SEAAQQELGLLMIFSYAFLEDKYNGSTVSVLGRNPVLDTVREMPIVGGTGLFRFARGYAQ 48
           + +AQQE  LLM+ ++AF+E KYNGS++SVLGRNPV+  VREMPIVGG+GLFR+ARGYA 
Sbjct: 99  ALSAQQEPALLMVMNFAFMEGKYNGSSISVLGRNPVMHAVREMPIVGGSGLFRYARGYAL 158

Query: 47  ARTVTFN-VLGDAVVE 3
           A TV F+   GDA+VE
Sbjct: 159 AHTVWFDGKTGDAIVE 174


>emb|CAN76752.1| hypothetical protein VITISV_009422 [Vitis vinifera]
          Length = 154

 Score =  173 bits (438), Expect = 1e-41
 Identities = 85/140 (60%), Positives = 109/140 (77%), Gaps = 5/140 (3%)
 Frame = -1

Query: 407 KVTNFHFFFHDTISGNNPSAIVIAGP----KDNSSFGTTRIADEPLTEGPEPTSKLIGKA 240
           K+++ HF+FHD ISG  P+A+ +A      K  + FG   + D+PLT GPEP+SKL+G+A
Sbjct: 7   KLSHLHFYFHDIISGPKPTAVRVAEAAMTNKSPTVFGAVLMMDDPLTVGPEPSSKLVGRA 66

Query: 239 QGIYSEAAQQELGLLMIFSYAFLEDKYNGSTVSVLGRNPVLDTVREMPIVGGTGLFRFAR 60
           QGIY+ A+Q+E+G LM+ ++AF+E KYNGST+SVLGRN +   VREMPIVGG+GLFRFAR
Sbjct: 67  QGIYASASQEEIGFLMVLNFAFMEGKYNGSTLSVLGRNTIFSKVREMPIVGGSGLFRFAR 126

Query: 59  GYAQARTVTFNV-LGDAVVE 3
           GYAQART TFNV  GD VVE
Sbjct: 127 GYAQARTHTFNVKTGDVVVE 146


>ref|XP_002280817.1| PREDICTED: disease resistance response protein 206 [Vitis vinifera]
           gi|297739799|emb|CBI29981.3| unnamed protein product
           [Vitis vinifera]
          Length = 189

 Score =  171 bits (434), Expect = 4e-41
 Identities = 84/139 (60%), Positives = 109/139 (78%), Gaps = 4/139 (2%)
 Frame = -1

Query: 407 KVTNFHFFFHDTISGNNPSAIVIAGP----KDNSSFGTTRIADEPLTEGPEPTSKLIGKA 240
           K+++ HF+FHD ISG  P+A+ +A      K  + FG   + D+PLT GPEP+SKL+G+A
Sbjct: 45  KLSHLHFYFHDIISGPKPTAVRVAEAAMTNKSATMFGAVLMMDDPLTVGPEPSSKLVGRA 104

Query: 239 QGIYSEAAQQELGLLMIFSYAFLEDKYNGSTVSVLGRNPVLDTVREMPIVGGTGLFRFAR 60
           QGIY+ A+Q+E+GLLM+ ++AF+E KYNGST+SVLGRN +   VREMPIVGG+GLFRFAR
Sbjct: 105 QGIYASASQEEMGLLMVLNFAFMEGKYNGSTLSVLGRNTIFSKVREMPIVGGSGLFRFAR 164

Query: 59  GYAQARTVTFNVLGDAVVE 3
           GYAQART TFN+  D VVE
Sbjct: 165 GYAQARTRTFNL--DVVVE 181


>emb|CAN61168.1| hypothetical protein VITISV_038109 [Vitis vinifera]
          Length = 151

 Score =  171 bits (434), Expect = 4e-41
 Identities = 84/139 (60%), Positives = 109/139 (78%), Gaps = 4/139 (2%)
 Frame = -1

Query: 407 KVTNFHFFFHDTISGNNPSAIVIAGP----KDNSSFGTTRIADEPLTEGPEPTSKLIGKA 240
           K+++ HF+FHD ISG  P+A+ +A      K  + FG   + D+PLT GPEP+SKL+G+A
Sbjct: 7   KLSHLHFYFHDIISGPKPTAVRVAEAAMTNKSATMFGAVLMMDDPLTVGPEPSSKLVGRA 66

Query: 239 QGIYSEAAQQELGLLMIFSYAFLEDKYNGSTVSVLGRNPVLDTVREMPIVGGTGLFRFAR 60
           QGIY+ A+Q+E+GLLM+ ++AF+E KYNGST+SVLGRN +   VREMPIVGG+GLFRFAR
Sbjct: 67  QGIYASASQEEMGLLMVLNFAFMEGKYNGSTLSVLGRNTIFSKVREMPIVGGSGLFRFAR 126

Query: 59  GYAQARTVTFNVLGDAVVE 3
           GYAQART TFN+  D VVE
Sbjct: 127 GYAQARTRTFNL--DVVVE 143


>ref|XP_002297761.1| predicted protein [Populus trichocarpa] gi|222845019|gb|EEE82566.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/135 (61%), Positives = 106/135 (78%)
 Frame = -1

Query: 407 KVTNFHFFFHDTISGNNPSAIVIAGPKDNSSFGTTRIADEPLTEGPEPTSKLIGKAQGIY 228
           K T+ HF+FHD +SG NP+AI IAGP DN +FG T +AD+PLTEG E +SK +GKAQG+Y
Sbjct: 43  KTTHLHFYFHDIVSGKNPTAIRIAGP-DNYAFGNTMMADDPLTEGLEISSKPVGKAQGLY 101

Query: 227 SEAAQQELGLLMIFSYAFLEDKYNGSTVSVLGRNPVLDTVREMPIVGGTGLFRFARGYAQ 48
           + A+Q +  LLM+ ++AF E KYNGS++S+LGRN +L+ VREMPIVGG+GLFR A GYA 
Sbjct: 102 AFASQNDFCLLMVMNFAFTEGKYNGSSISILGRNQILNDVREMPIVGGSGLFRLAHGYAL 161

Query: 47  ARTVTFNVLGDAVVE 3
           A TV F+  GDA VE
Sbjct: 162 AHTVWFDEQGDATVE 176


Top