BLASTX nr result

ID: Coptis21_contig00005216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005216
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284937.1| PREDICTED: gibberellin-regulated protein 6 [...   143   2e-32
emb|CAJ77893.1| GASA [Fagus sylvatica]                                137   2e-30
gb|AFK42462.1| unknown [Lotus japonicus]                              137   2e-30
ref|NP_001240084.1| uncharacterized protein LOC100787539 precurs...   134   2e-29
gb|ACF74297.1| gibberellin-regulated protein [Arachis hypogaea]       134   2e-29

>ref|XP_002284937.1| PREDICTED: gibberellin-regulated protein 6 [Vitis vinifera]
           gi|297733977|emb|CBI15224.3| unnamed protein product
           [Vitis vinifera]
          Length = 104

 Score =  143 bits (361), Expect = 2e-32
 Identities = 62/88 (70%), Positives = 70/88 (79%)
 Frame = -2

Query: 422 STLVLASETQANLDGGRSYGQRALTSNQCPNQCSRRCRKVGHHHQTCMFLCQKCCTKCLC 243
           +T V+A E Q +LD G SYG  +L SNQCP+QC+RRC K   +H+ CMF CQKCC KCLC
Sbjct: 19  ATKVMAKEAQYHLDSG-SYGPGSLKSNQCPSQCTRRCSKT-QYHKPCMFFCQKCCAKCLC 76

Query: 242 VPPGTYGNKAVCPCYNNWKTKRGGPKCP 159
           VPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 77  VPPGYYGNKAVCPCYNNWKTKEGGPKCP 104


>emb|CAJ77893.1| GASA [Fagus sylvatica]
          Length = 107

 Score =  137 bits (345), Expect = 2e-30
 Identities = 63/94 (67%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
 Frame = -2

Query: 434 SMLQSTLVLASETQA--NLDGGRSYGQRALTSNQCPNQCSRRCRKVGHHHQTCMFLCQKC 261
           SMLQ T+V+AS      + D    YGQ +L S QCP+QCSRRC K   +H+ CMF CQKC
Sbjct: 16  SMLQ-TMVMASHGHGGHHYDNTSKYGQGSLKSYQCPSQCSRRCSKT-QYHKPCMFFCQKC 73

Query: 260 CTKCLCVPPGTYGNKAVCPCYNNWKTKRGGPKCP 159
           C KCLCVPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 74  CKKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107


>gb|AFK42462.1| unknown [Lotus japonicus]
          Length = 105

 Score =  137 bits (344), Expect = 2e-30
 Identities = 57/92 (61%), Positives = 71/92 (77%)
 Frame = -2

Query: 434 SMLQSTLVLASETQANLDGGRSYGQRALTSNQCPNQCSRRCRKVGHHHQTCMFLCQKCCT 255
           SM+ + ++     Q +LD G +YG  +L SN+CP+QC+RRC +   +H+ CMF CQKCC 
Sbjct: 16  SMIATQVMAKENAQYHLDSG-NYGPGSLKSNECPSQCTRRCAQT-QYHKPCMFFCQKCCA 73

Query: 254 KCLCVPPGTYGNKAVCPCYNNWKTKRGGPKCP 159
           KCLCVPPG YGNK+VCPCYNNWKTKRGGPKCP
Sbjct: 74  KCLCVPPGYYGNKSVCPCYNNWKTKRGGPKCP 105


>ref|NP_001240084.1| uncharacterized protein LOC100787539 precursor [Glycine max]
           gi|255637976|gb|ACU19304.1| unknown [Glycine max]
           gi|323319531|gb|ADX36136.1| gibberellic acid-stimulated
           protein 2 [Glycine soja]
          Length = 107

 Score =  134 bits (336), Expect = 2e-29
 Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = -2

Query: 434 SMLQSTLVLASETQANL-DGGRSYGQRALTSNQCPNQCSRRCRKVGHHHQTCMFLCQKCC 258
           SMLQ+ ++ A+E   +L D    YG  ++   QCP+QCSRRC +   +H+ CMF CQKCC
Sbjct: 16  SMLQTVVMAANEQGGHLYDNKSKYGSGSVKRYQCPSQCSRRCSQT-QYHKPCMFFCQKCC 74

Query: 257 TKCLCVPPGTYGNKAVCPCYNNWKTKRGGPKCP 159
            KCLCVPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 75  RKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107


>gb|ACF74297.1| gibberellin-regulated protein [Arachis hypogaea]
          Length = 107

 Score =  134 bits (336), Expect = 2e-29
 Identities = 61/94 (64%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
 Frame = -2

Query: 434 SMLQSTLVLASETQAN--LDGGRSYGQRALTSNQCPNQCSRRCRKVGHHHQTCMFLCQKC 261
           SMLQ T+V+A+  Q     D    YG  ++ S QCP+QCSRRC K   +H+ CMF CQKC
Sbjct: 16  SMLQ-TMVMAANGQGGHLYDNKSQYGPGSVKSYQCPSQCSRRCGKT-QYHKPCMFFCQKC 73

Query: 260 CTKCLCVPPGTYGNKAVCPCYNNWKTKRGGPKCP 159
           C KCLCVPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 74  CRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107


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