BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005214
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61544.1| hypothetical protein VITISV_008490 [Vitis vinifera]   140   4e-31
ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257...   139   7e-31
ref|XP_002528386.1| eukaryotic translation initiation factor 3 s...   132   1e-28
ref|XP_002308421.1| predicted protein [Populus trichocarpa] gi|2...   126   6e-27
ref|XP_003525941.1| PREDICTED: protein KIAA0664 homolog [Glycine...   124   2e-26

>emb|CAN61544.1| hypothetical protein VITISV_008490 [Vitis vinifera]
          Length = 2171

 Score =  140 bits (353), Expect = 4e-31
 Identities = 109/322 (33%), Positives = 154/322 (47%), Gaps = 28/322 (8%)
 Frame = +3

Query: 3    KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNE-TYGASTAXX 179
            KGRSPAGRK SGSRRPSLAKL+TNSMN S+S RYRGK + F SPRTSPNE +    +   
Sbjct: 1529 KGRSPAGRKASGSRRPSLAKLNTNSMNASQSPRYRGKPTGFASPRTSPNESSTPTGSVLP 1588

Query: 180  XXXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSAG 359
                           N+ T    G                         L S  S+Q+AG
Sbjct: 1589 VPKKFVKSSSFSPKQNTPTTSGTGPEKLSNPKSAPASPAASDQVSKPAPLASPISVQAAG 1648

Query: 360  KLLSYKEVALAPPGTIEKAVAEKQAKEHI--EHNSLVSVEKVNTEPTESEKAKEKQVQTS 533
            KL SYKEVALAPPGTI K V E+  KE++  E N  +  E   T   E+ + KE++    
Sbjct: 1649 KLFSYKEVALAPPGTIVKVVKEQLPKENVSAEQNPRMGKEAKETPVMETAQGKEEKTAKD 1708

Query: 534  IQGEK----------------LSPVSSEEKKCPMS------DKKETELQNPMVIELSQ-- 641
            ++GEK                +  V++EEK+   S      ++ E++      +E  +  
Sbjct: 1709 VEGEKVKKHVGEKKLLVSKQEMKGVANEEKQVAHSVLTASPEQVESDATEEKKLEAKKVV 1768

Query: 642  ETKGAGVIQKEAKAGEVR-SQTEKSDLVKDSVSNVAPSEYDDPEAGPTSSVECVMISSNS 818
            E KG  V + +A+AG V  +  + SD   D   N   S+ D  + G   +    + S +S
Sbjct: 1769 EVKGVSVEEAKAEAGNVAVTGLKNSDSSND--LNTTDSKSDILQKGLLDNSH--VASPDS 1824

Query: 819  DSQLITTENTIVQTETESATVK 884
            + Q + T+NT +    +++  K
Sbjct: 1825 EPQSVLTDNTTLLLXNDASLPK 1846


>ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257033 [Vitis vinifera]
          Length = 1897

 Score =  139 bits (351), Expect = 7e-31
 Identities = 109/319 (34%), Positives = 153/319 (47%), Gaps = 25/319 (7%)
 Frame = +3

Query: 3    KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNE-TYGASTAXX 179
            KGRSPAGRK SGSRRPSLAKL+TNSMN S+S RYRGK + F SPRTSPNE +    +   
Sbjct: 1258 KGRSPAGRKASGSRRPSLAKLNTNSMNASQSPRYRGKPTGFASPRTSPNESSTPTGSVLP 1317

Query: 180  XXXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSAG 359
                           N+ T    G                         L S  S+Q+AG
Sbjct: 1318 VPKKFVKSSSFSPKQNTPTTSGTGPEKLSNPKSAPASPAASDQVSKPAPLASPISVQAAG 1377

Query: 360  KLLSYKEVALAPPGTIEKAVAEKQAKEHI--EHNSLVSVEKVNTEPTESEKAKEKQVQTS 533
            KL SYKEVALAPPGTI K V E+  KE++  E N  +  E   T   E+ + KE++    
Sbjct: 1378 KLFSYKEVALAPPGTIVKVVKEQLPKENVSAEQNPRMGKEAKETPVMETAQGKEEKTAKD 1437

Query: 534  IQGEKLSP--------VSSEEKKCPMSDKKET----------ELQNPMVIELSQETKGA- 656
            ++GEK+          VS +E K   +++K+           ++++    E   E K   
Sbjct: 1438 VEGEKVKKHVGEKKLLVSKQEMKGVANEEKQVAHSVLTASPEQVESDATEEKKLEAKKVE 1497

Query: 657  --GVIQKEAKAGEVR-SQTEKSDLVKDSVSNVAPSEYDDPEAGPTSSVECVMISSNSDSQ 827
              GV   +A+AG V  +  + SD   D   N   S+ D  + G   +    + S +S+ Q
Sbjct: 1498 VKGVSVAKAEAGNVAVTGLKNSDSSND--LNTTDSKSDILQKGLLDNSH--VASPDSEPQ 1553

Query: 828  LITTENTIVQTETESATVK 884
             + T+NT +  E +++  K
Sbjct: 1554 SVLTDNTTLLLENDASLPK 1572


>ref|XP_002528386.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223532174|gb|EEF33979.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1888

 Score =  132 bits (331), Expect = 1e-28
 Identities = 99/273 (36%), Positives = 137/273 (50%), Gaps = 11/273 (4%)
 Frame = +3

Query: 3    KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNETYGA-STAXX 179
            KGRSP  RK SGSRRPSLAKL+TN MN+S+S+R+R K + FTSPRTSP+++  +   +  
Sbjct: 1264 KGRSPTSRKASGSRRPSLAKLNTNFMNLSQSSRFRAKAANFTSPRTSPSDSVASPGPSLP 1323

Query: 180  XXXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSAG 359
                           N++     G                         + S  S+Q+AG
Sbjct: 1324 APKKFSKSSSFSPKQNNSGATAGGTEKSINSKSAPATPASTDQVAKSALVASPISVQAAG 1383

Query: 360  KLLSYKEVALAPPGTIEKAVAEKQAKEHI--EHNSLVSVEKVNTE-----PTESEKAKEK 518
            KL SYKEVALAPPGTI KAV E+  K ++  E  + V+ +   +E      T    A+E+
Sbjct: 1384 KLFSYKEVALAPPGTIVKAVTEQLPKGNLPAEPTTQVNYDTAVSEVIVGGVTALRDAEEE 1443

Query: 519  QVQTSIQGEKLSPVSSEEKKCPMSDKKETELQNPMVIELSQETKGAGVIQKEAKAGEVRS 698
            +VQ  ++GE      S+E+K     K E E  N  V E  +ETK A     E KAG V S
Sbjct: 1444 KVQ-KLEGES-QLHGSKERKSHSDVKHEAESGNLEVNEPREETKYAHTDHVEEKAGVVES 1501

Query: 699  QTEKSDLVKDSVSNVAPSEY---DDPEAGPTSS 788
            +T   ++  ++  N A  E+   D   +  TSS
Sbjct: 1502 KTASVEVTNENAGNSAVLEHENLDSKHSNTTSS 1534


>ref|XP_002308421.1| predicted protein [Populus trichocarpa] gi|222854397|gb|EEE91944.1|
            predicted protein [Populus trichocarpa]
          Length = 843

 Score =  126 bits (317), Expect = 6e-27
 Identities = 99/294 (33%), Positives = 140/294 (47%), Gaps = 7/294 (2%)
 Frame = +3

Query: 3    KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNETYGAST--AX 176
            KGRSP  RK SGSRRPSLAKL+TN MN+ +S+R+RGK + F SP+TSPN+   AST    
Sbjct: 216  KGRSPTSRKSSGSRRPSLAKLNTNFMNLPQSSRFRGKPNNFASPKTSPNDP-AASTGLTV 274

Query: 177  XXXXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSA 356
                            N++     G                           S  S+QSA
Sbjct: 275  PVPKKFAKSASFSTKVNNSGASTGGAEKSSTPKSAPATPASTEQVAKAAPTASPISVQSA 334

Query: 357  GKLLSYKEVALAPPGTIEKAVAEKQAKEHI--EHNSLVSVEKVNTEPTESE--KAKEKQV 524
            GK+ SYKEVALAPPGTI KAVAE+  K ++  E ++  S E   T+ T  E    K  +V
Sbjct: 335  GKIFSYKEVALAPPGTIVKAVAEQLPKGNLPMEPSTQGSNEASATDVTSGEVTTLKAAEV 394

Query: 525  QTSIQGEKLSPV-SSEEKKCPMSDKKETELQNPMVIELSQETKGAGVIQKEAKAGEVRSQ 701
               ++ E +  + +SE  K P+  KKETE    +  E           Q E K   V  +
Sbjct: 395  DNFLKPEAVKHLPASEGMKSPVDQKKETEEGGLVATE-----------QLEGKKSAVEDR 443

Query: 702  TEKSDLVKDSVSNVAPSEYDDPEAGPTSSVECVMISSNSDSQLITTENTIVQTE 863
            T+K D    +   +   + +  EAG  S +    + ++ DS  I++   + +T+
Sbjct: 444  TDKED--NGAEIKIVAVKVNTSEAGNISFLGNENLDTSKDSNTISSPTEVPETQ 495


>ref|XP_003525941.1| PREDICTED: protein KIAA0664 homolog [Glycine max]
          Length = 1859

 Score =  124 bits (312), Expect = 2e-26
 Identities = 95/241 (39%), Positives = 120/241 (49%), Gaps = 11/241 (4%)
 Frame = +3

Query: 3    KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNETYGASTAXXX 182
            KGRS  GRK S SRRP+LAKL+TN MNVS+S+RYRGK + F+SPRT+ NET  A  +   
Sbjct: 1243 KGRSLTGRKSSSSRRPTLAKLNTNFMNVSQSSRYRGKPTNFSSPRTNLNETI-AGPSPSV 1301

Query: 183  XXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSAGK 362
                          NS+  P  G                           S  S+QSAGK
Sbjct: 1302 AKKFIKSASFSPKLNSSNAPDAGAEKLADSKSAPASPAPSDQIAKPAPSNSGISVQSAGK 1361

Query: 363  LLSYKEVALAPPGTIEKAVAEKQAKEH-IEHNSLVSVEKVNTEPTESEKAKEKQV----Q 527
            L SYKEVALAPPGTI K VAE+  K + I+ NS VS   V T+ T++  A    V    Q
Sbjct: 1362 LYSYKEVALAPPGTIVKVVAEQSPKGNPIQLNSEVSAMIVATKETQNIMATTNDVEDYFQ 1421

Query: 528  TSIQGEKLSPVSSE-EKKCPMSDKKETELQNPM----VIELS-QETKGAGVIQKEAKAGE 689
             SI  ++ SPV  E E+K     K  TE  N      V E+  QE     +++K  +   
Sbjct: 1422 KSIDVKQQSPVHQEQEEKETTVVKDNTETVNSKAKDEVFEVKLQEANNVAILEKITEVAN 1481

Query: 690  V 692
            +
Sbjct: 1482 I 1482