BLASTX nr result
ID: Coptis21_contig00005214
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005214 (884 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN61544.1| hypothetical protein VITISV_008490 [Vitis vinifera] 140 4e-31 ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257... 139 7e-31 ref|XP_002528386.1| eukaryotic translation initiation factor 3 s... 132 1e-28 ref|XP_002308421.1| predicted protein [Populus trichocarpa] gi|2... 126 6e-27 ref|XP_003525941.1| PREDICTED: protein KIAA0664 homolog [Glycine... 124 2e-26 >emb|CAN61544.1| hypothetical protein VITISV_008490 [Vitis vinifera] Length = 2171 Score = 140 bits (353), Expect = 4e-31 Identities = 109/322 (33%), Positives = 154/322 (47%), Gaps = 28/322 (8%) Frame = +3 Query: 3 KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNE-TYGASTAXX 179 KGRSPAGRK SGSRRPSLAKL+TNSMN S+S RYRGK + F SPRTSPNE + + Sbjct: 1529 KGRSPAGRKASGSRRPSLAKLNTNSMNASQSPRYRGKPTGFASPRTSPNESSTPTGSVLP 1588 Query: 180 XXXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSAG 359 N+ T G L S S+Q+AG Sbjct: 1589 VPKKFVKSSSFSPKQNTPTTSGTGPEKLSNPKSAPASPAASDQVSKPAPLASPISVQAAG 1648 Query: 360 KLLSYKEVALAPPGTIEKAVAEKQAKEHI--EHNSLVSVEKVNTEPTESEKAKEKQVQTS 533 KL SYKEVALAPPGTI K V E+ KE++ E N + E T E+ + KE++ Sbjct: 1649 KLFSYKEVALAPPGTIVKVVKEQLPKENVSAEQNPRMGKEAKETPVMETAQGKEEKTAKD 1708 Query: 534 IQGEK----------------LSPVSSEEKKCPMS------DKKETELQNPMVIELSQ-- 641 ++GEK + V++EEK+ S ++ E++ +E + Sbjct: 1709 VEGEKVKKHVGEKKLLVSKQEMKGVANEEKQVAHSVLTASPEQVESDATEEKKLEAKKVV 1768 Query: 642 ETKGAGVIQKEAKAGEVR-SQTEKSDLVKDSVSNVAPSEYDDPEAGPTSSVECVMISSNS 818 E KG V + +A+AG V + + SD D N S+ D + G + + S +S Sbjct: 1769 EVKGVSVEEAKAEAGNVAVTGLKNSDSSND--LNTTDSKSDILQKGLLDNSH--VASPDS 1824 Query: 819 DSQLITTENTIVQTETESATVK 884 + Q + T+NT + +++ K Sbjct: 1825 EPQSVLTDNTTLLLXNDASLPK 1846 >ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257033 [Vitis vinifera] Length = 1897 Score = 139 bits (351), Expect = 7e-31 Identities = 109/319 (34%), Positives = 153/319 (47%), Gaps = 25/319 (7%) Frame = +3 Query: 3 KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNE-TYGASTAXX 179 KGRSPAGRK SGSRRPSLAKL+TNSMN S+S RYRGK + F SPRTSPNE + + Sbjct: 1258 KGRSPAGRKASGSRRPSLAKLNTNSMNASQSPRYRGKPTGFASPRTSPNESSTPTGSVLP 1317 Query: 180 XXXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSAG 359 N+ T G L S S+Q+AG Sbjct: 1318 VPKKFVKSSSFSPKQNTPTTSGTGPEKLSNPKSAPASPAASDQVSKPAPLASPISVQAAG 1377 Query: 360 KLLSYKEVALAPPGTIEKAVAEKQAKEHI--EHNSLVSVEKVNTEPTESEKAKEKQVQTS 533 KL SYKEVALAPPGTI K V E+ KE++ E N + E T E+ + KE++ Sbjct: 1378 KLFSYKEVALAPPGTIVKVVKEQLPKENVSAEQNPRMGKEAKETPVMETAQGKEEKTAKD 1437 Query: 534 IQGEKLSP--------VSSEEKKCPMSDKKET----------ELQNPMVIELSQETKGA- 656 ++GEK+ VS +E K +++K+ ++++ E E K Sbjct: 1438 VEGEKVKKHVGEKKLLVSKQEMKGVANEEKQVAHSVLTASPEQVESDATEEKKLEAKKVE 1497 Query: 657 --GVIQKEAKAGEVR-SQTEKSDLVKDSVSNVAPSEYDDPEAGPTSSVECVMISSNSDSQ 827 GV +A+AG V + + SD D N S+ D + G + + S +S+ Q Sbjct: 1498 VKGVSVAKAEAGNVAVTGLKNSDSSND--LNTTDSKSDILQKGLLDNSH--VASPDSEPQ 1553 Query: 828 LITTENTIVQTETESATVK 884 + T+NT + E +++ K Sbjct: 1554 SVLTDNTTLLLENDASLPK 1572 >ref|XP_002528386.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223532174|gb|EEF33979.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] Length = 1888 Score = 132 bits (331), Expect = 1e-28 Identities = 99/273 (36%), Positives = 137/273 (50%), Gaps = 11/273 (4%) Frame = +3 Query: 3 KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNETYGA-STAXX 179 KGRSP RK SGSRRPSLAKL+TN MN+S+S+R+R K + FTSPRTSP+++ + + Sbjct: 1264 KGRSPTSRKASGSRRPSLAKLNTNFMNLSQSSRFRAKAANFTSPRTSPSDSVASPGPSLP 1323 Query: 180 XXXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSAG 359 N++ G + S S+Q+AG Sbjct: 1324 APKKFSKSSSFSPKQNNSGATAGGTEKSINSKSAPATPASTDQVAKSALVASPISVQAAG 1383 Query: 360 KLLSYKEVALAPPGTIEKAVAEKQAKEHI--EHNSLVSVEKVNTE-----PTESEKAKEK 518 KL SYKEVALAPPGTI KAV E+ K ++ E + V+ + +E T A+E+ Sbjct: 1384 KLFSYKEVALAPPGTIVKAVTEQLPKGNLPAEPTTQVNYDTAVSEVIVGGVTALRDAEEE 1443 Query: 519 QVQTSIQGEKLSPVSSEEKKCPMSDKKETELQNPMVIELSQETKGAGVIQKEAKAGEVRS 698 +VQ ++GE S+E+K K E E N V E +ETK A E KAG V S Sbjct: 1444 KVQ-KLEGES-QLHGSKERKSHSDVKHEAESGNLEVNEPREETKYAHTDHVEEKAGVVES 1501 Query: 699 QTEKSDLVKDSVSNVAPSEY---DDPEAGPTSS 788 +T ++ ++ N A E+ D + TSS Sbjct: 1502 KTASVEVTNENAGNSAVLEHENLDSKHSNTTSS 1534 >ref|XP_002308421.1| predicted protein [Populus trichocarpa] gi|222854397|gb|EEE91944.1| predicted protein [Populus trichocarpa] Length = 843 Score = 126 bits (317), Expect = 6e-27 Identities = 99/294 (33%), Positives = 140/294 (47%), Gaps = 7/294 (2%) Frame = +3 Query: 3 KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNETYGAST--AX 176 KGRSP RK SGSRRPSLAKL+TN MN+ +S+R+RGK + F SP+TSPN+ AST Sbjct: 216 KGRSPTSRKSSGSRRPSLAKLNTNFMNLPQSSRFRGKPNNFASPKTSPNDP-AASTGLTV 274 Query: 177 XXXXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSA 356 N++ G S S+QSA Sbjct: 275 PVPKKFAKSASFSTKVNNSGASTGGAEKSSTPKSAPATPASTEQVAKAAPTASPISVQSA 334 Query: 357 GKLLSYKEVALAPPGTIEKAVAEKQAKEHI--EHNSLVSVEKVNTEPTESE--KAKEKQV 524 GK+ SYKEVALAPPGTI KAVAE+ K ++ E ++ S E T+ T E K +V Sbjct: 335 GKIFSYKEVALAPPGTIVKAVAEQLPKGNLPMEPSTQGSNEASATDVTSGEVTTLKAAEV 394 Query: 525 QTSIQGEKLSPV-SSEEKKCPMSDKKETELQNPMVIELSQETKGAGVIQKEAKAGEVRSQ 701 ++ E + + +SE K P+ KKETE + E Q E K V + Sbjct: 395 DNFLKPEAVKHLPASEGMKSPVDQKKETEEGGLVATE-----------QLEGKKSAVEDR 443 Query: 702 TEKSDLVKDSVSNVAPSEYDDPEAGPTSSVECVMISSNSDSQLITTENTIVQTE 863 T+K D + + + + EAG S + + ++ DS I++ + +T+ Sbjct: 444 TDKED--NGAEIKIVAVKVNTSEAGNISFLGNENLDTSKDSNTISSPTEVPETQ 495 >ref|XP_003525941.1| PREDICTED: protein KIAA0664 homolog [Glycine max] Length = 1859 Score = 124 bits (312), Expect = 2e-26 Identities = 95/241 (39%), Positives = 120/241 (49%), Gaps = 11/241 (4%) Frame = +3 Query: 3 KGRSPAGRKPSGSRRPSLAKLSTNSMNVSESARYRGKTSTFTSPRTSPNETYGASTAXXX 182 KGRS GRK S SRRP+LAKL+TN MNVS+S+RYRGK + F+SPRT+ NET A + Sbjct: 1243 KGRSLTGRKSSSSRRPTLAKLNTNFMNVSQSSRYRGKPTNFSSPRTNLNETI-AGPSPSV 1301 Query: 183 XXXXXXXXXXXXXXNSTTVPIPGXXXXXXXXXXXXXXXXXXXXXXXTSLGSSASIQSAGK 362 NS+ P G S S+QSAGK Sbjct: 1302 AKKFIKSASFSPKLNSSNAPDAGAEKLADSKSAPASPAPSDQIAKPAPSNSGISVQSAGK 1361 Query: 363 LLSYKEVALAPPGTIEKAVAEKQAKEH-IEHNSLVSVEKVNTEPTESEKAKEKQV----Q 527 L SYKEVALAPPGTI K VAE+ K + I+ NS VS V T+ T++ A V Q Sbjct: 1362 LYSYKEVALAPPGTIVKVVAEQSPKGNPIQLNSEVSAMIVATKETQNIMATTNDVEDYFQ 1421 Query: 528 TSIQGEKLSPVSSE-EKKCPMSDKKETELQNPM----VIELS-QETKGAGVIQKEAKAGE 689 SI ++ SPV E E+K K TE N V E+ QE +++K + Sbjct: 1422 KSIDVKQQSPVHQEQEEKETTVVKDNTETVNSKAKDEVFEVKLQEANNVAILEKITEVAN 1481 Query: 690 V 692 + Sbjct: 1482 I 1482