BLASTX nr result

ID: Coptis21_contig00005212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005212
         (2128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation...   922   0.0  
ref|XP_003522695.1| PREDICTED: eukaryotic translation initiation...   906   0.0  
ref|XP_003526476.1| PREDICTED: eukaryotic translation initiation...   905   0.0  
ref|XP_003636390.1| Eukaryotic translation initiation factor 3 s...   896   0.0  
ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation...   890   0.0  

>ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Vitis vinifera]
          Length = 517

 Score =  922 bits (2382), Expect = 0.0
 Identities = 441/497 (88%), Positives = 479/497 (96%)
 Frame = -1

Query: 1960 GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 1781
            GYDPN+VP++V+TFVVHLYRHIREKNVYEIHQMYE SFQ LS+R+FKE+PWPSVDAVA H
Sbjct: 20   GYDPNYVPDSVRTFVVHLYRHIREKNVYEIHQMYESSFQTLSDRLFKETPWPSVDAVAHH 79

Query: 1780 VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 1601
            VD+DHVFCLLYREMW+RHLYARLSPT KQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 80   VDNDHVFCLLYREMWYRHLYARLSPTAKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 139

Query: 1600 MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 1421
            MVDEFVYQFQSFCQYRAKMK+KTE EIALLRQ+DQAWNVYGVLNFLQALVEKS IIQILE
Sbjct: 140  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQYDQAWNVYGVLNFLQALVEKSMIIQILE 199

Query: 1420 QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQP 1241
            QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PIDISQ 
Sbjct: 200  QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQ 259

Query: 1240 GGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQILK 1061
             GVYTSVIGSHITTIYH+GFANLMLRRYVEAIREF+KIL+YI+K KQ+HQKSPQYEQILK
Sbjct: 260  -GVYTSVIGSHITTIYHFGFANLMLRRYVEAIREFNKILLYIYKTKQFHQKSPQYEQILK 318

Query: 1060 KNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYAC 881
            KNEQMYALLAICLSLCPQ +LV + V +QL+EKYGEKM+RMQRYDDEA+ALYDELFSYAC
Sbjct: 319  KNEQMYALLAICLSLCPQEQLVEETVQSQLKEKYGEKMNRMQRYDDEAFALYDELFSYAC 378

Query: 880  PKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIGKLAT 701
            PKFITPS+P+YEEPLVNYNQ+AYRLQLKLFLYEVKQQQLLSGVR+FLK+YSTIS+GKLAT
Sbjct: 379  PKFITPSAPVYEEPLVNYNQEAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGKLAT 438

Query: 700  YMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYIIEDMIHVVESKSTKRYGDYFM 521
            YMEVD+PT+R+IL+TYKHKTHAVDSDGKI SNADVDFYI +DMIHV+ESK TKRYGDYFM
Sbjct: 439  YMEVDDPTLRTILMTYKHKTHAVDSDGKIGSNADVDFYIDDDMIHVIESKPTKRYGDYFM 498

Query: 520  RHIVKLEEMINDMDRVK 470
            R +VKLE ++NDMDRVK
Sbjct: 499  RQVVKLEGLMNDMDRVK 515


>ref|XP_003522695.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Glycine max]
          Length = 514

 Score =  906 bits (2341), Expect = 0.0
 Identities = 437/501 (87%), Positives = 474/501 (94%)
 Frame = -1

Query: 1972 PELSGYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDA 1793
            P+  GYDPNFVP++VK+FVVHLYRHIREKNVYEIHQMYE SFQ LSER+FK++PWPSVDA
Sbjct: 13   PQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDA 72

Query: 1792 VAPHVDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 1613
            VA +VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQ
Sbjct: 73   VAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 132

Query: 1612 WLWDMVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTII 1433
            WLWDMVDEFVYQFQSFCQYRAKMKSKTE EIALLRQFDQAWNV+GVLNFLQALVEKS II
Sbjct: 133  WLWDMVDEFVYQFQSFCQYRAKMKSKTEQEIALLRQFDQAWNVFGVLNFLQALVEKSAII 192

Query: 1432 QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPID 1253
            QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PID
Sbjct: 193  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPID 252

Query: 1252 ISQPGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYE 1073
            I+Q  GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREF+KIL+YIFK KQYHQKSPQYE
Sbjct: 253  ITQQ-GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYE 311

Query: 1072 QILKKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELF 893
            QILKKNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKM RMQRYDDEA+A+YDELF
Sbjct: 312  QILKKNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELF 371

Query: 892  SYACPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIG 713
            SYACPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSGVR+FLK+YSTIS+ 
Sbjct: 372  SYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLT 431

Query: 712  KLATYMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYIIEDMIHVVESKSTKRYG 533
            KLA+YMEVDEPT+R+IL+TYKHKTHAVDSDGKI SNAD+DFYI +D IHV+ESK  KRYG
Sbjct: 432  KLASYMEVDEPTLRTILMTYKHKTHAVDSDGKITSNADLDFYIDDDTIHVMESKPAKRYG 491

Query: 532  DYFMRHIVKLEEMINDMDRVK 470
            DYF+R IVKLE +IN+MD +K
Sbjct: 492  DYFLRQIVKLEGVINEMDGIK 512


>ref|XP_003526476.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Glycine max]
          Length = 516

 Score =  905 bits (2338), Expect = 0.0
 Identities = 436/501 (87%), Positives = 474/501 (94%)
 Frame = -1

Query: 1972 PELSGYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDA 1793
            P+  GYDPNFVP++VK+FVVHLYRHIREKNVYEIHQMYE SFQ LSER+FK++PWPSVDA
Sbjct: 15   PQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDA 74

Query: 1792 VAPHVDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 1613
            VA +VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQ
Sbjct: 75   VAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 134

Query: 1612 WLWDMVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTII 1433
            WLWDMVDEFVYQFQSFCQYRAKMK+KTE EIALLRQFDQAWNV+GVLNFLQALVEKS II
Sbjct: 135  WLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVFGVLNFLQALVEKSAII 194

Query: 1432 QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPID 1253
            QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PID
Sbjct: 195  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPID 254

Query: 1252 ISQPGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYE 1073
            I+Q  GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREF+KIL+YIFK KQYHQKSPQYE
Sbjct: 255  ITQQ-GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYE 313

Query: 1072 QILKKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELF 893
            QILKKNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKM RMQRYDDEA+A+YDELF
Sbjct: 314  QILKKNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELF 373

Query: 892  SYACPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIG 713
            SYACPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSGVR+FLK+YSTIS+ 
Sbjct: 374  SYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLT 433

Query: 712  KLATYMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYIIEDMIHVVESKSTKRYG 533
            KLA+YMEVDEPT+R+IL+TYKHKTHAVDSDGKI SNAD+DFYI +D IHV+ESK  KRYG
Sbjct: 434  KLASYMEVDEPTLRTILMTYKHKTHAVDSDGKITSNADLDFYINDDTIHVMESKPAKRYG 493

Query: 532  DYFMRHIVKLEEMINDMDRVK 470
            DYF+R IVKLE +IN+MD +K
Sbjct: 494  DYFLRQIVKLEGVINEMDGIK 514


>ref|XP_003636390.1| Eukaryotic translation initiation factor 3 subunit L [Medicago
            truncatula] gi|355502325|gb|AES83528.1| Eukaryotic
            translation initiation factor 3 subunit L [Medicago
            truncatula]
          Length = 511

 Score =  896 bits (2316), Expect = 0.0
 Identities = 432/497 (86%), Positives = 469/497 (94%)
 Frame = -1

Query: 1960 GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 1781
            GYDPNFVP+ VKTFVVHLYRHIREKNVYEIHQMYE SFQ LSER FK++PWPSVDAVA +
Sbjct: 14   GYDPNFVPDPVKTFVVHLYRHIREKNVYEIHQMYETSFQTLSERFFKDTPWPSVDAVAQY 73

Query: 1780 VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 1601
            VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 74   VDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 133

Query: 1600 MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 1421
            MVDEFVYQFQSFCQYRAKMK+KTE EIALL+QFDQAWNV+GVLNFLQALVEKSTIIQILE
Sbjct: 134  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLKQFDQAWNVFGVLNFLQALVEKSTIIQILE 193

Query: 1420 QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQP 1241
            QEKEGLEQFT+ DGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL PIDISQ 
Sbjct: 194  QEKEGLEQFTSNDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLEPIDISQ- 252

Query: 1240 GGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQILK 1061
             GVYT VIG HITTIYHYGFANLMLRRYV+AIREF+KIL+YIFK K YHQKSPQYEQILK
Sbjct: 253  SGVYTIVIGCHITTIYHYGFANLMLRRYVDAIREFNKILLYIFKYKVYHQKSPQYEQILK 312

Query: 1060 KNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYAC 881
            KNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKMSRMQRYDDEA+A+YDELFSYAC
Sbjct: 313  KNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMSRMQRYDDEAFAMYDELFSYAC 372

Query: 880  PKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIGKLAT 701
            PKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSG+R+FLK+YSTIS+ KLA+
Sbjct: 373  PKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGLRTFLKVYSTISLAKLAS 432

Query: 700  YMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYIIEDMIHVVESKSTKRYGDYFM 521
            YMEVDEPT+R+IL+TYKHKTHAVDS GKIISNADVDFYI +D IHVVESK +KRYGDYF+
Sbjct: 433  YMEVDEPTLRTILMTYKHKTHAVDSAGKIISNADVDFYIDDDTIHVVESKPSKRYGDYFL 492

Query: 520  RHIVKLEEMINDMDRVK 470
            R +VKLE++IN+MD +K
Sbjct: 493  RQVVKLEKVINEMDSIK 509


>ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Cucumis sativus] gi|449508023|ref|XP_004163195.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit L-like [Cucumis sativus]
          Length = 528

 Score =  890 bits (2300), Expect = 0.0
 Identities = 430/498 (86%), Positives = 471/498 (94%), Gaps = 1/498 (0%)
 Frame = -1

Query: 1960 GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 1781
            GYDPNFVP++VK+FVVHLYRHIREKNVYE HQMYE SFQ LS+R+FK++PWPSVDAVA  
Sbjct: 30   GYDPNFVPDSVKSFVVHLYRHIREKNVYETHQMYETSFQSLSDRLFKDTPWPSVDAVAHF 89

Query: 1780 VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 1601
            VD+DHVFCLLYREMWFRHLYARLSPT KQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 90   VDNDHVFCLLYREMWFRHLYARLSPTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 149

Query: 1600 MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 1421
            MVDEFVYQFQSFCQYRAKMK+KTE EIALLRQFDQAWNVYGVLN+LQA VEKS+II ILE
Sbjct: 150  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNYLQAFVEKSSIIHILE 209

Query: 1420 QEKEGLEQFTATDGYDYNGGS-NVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQ 1244
            +EKEGLEQFTATDGYDY+GGS NVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PIDISQ
Sbjct: 210  EEKEGLEQFTATDGYDYSGGSSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQ 269

Query: 1243 PGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQIL 1064
             G V+TSVIGSHITTIYHYGFANLMLRRYV+AI EF++IL+YI+K KQYHQKSPQYEQIL
Sbjct: 270  QG-VFTSVIGSHITTIYHYGFANLMLRRYVDAIHEFNRILLYIYKTKQYHQKSPQYEQIL 328

Query: 1063 KKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYA 884
            KKNEQMYALLAIC+SLCPQGKLV + VN+QLREKYGEKM RMQRYD+EA+A+YDELFSYA
Sbjct: 329  KKNEQMYALLAICVSLCPQGKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDELFSYA 388

Query: 883  CPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIGKLA 704
            CPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVR+FLK+YSTIS+G+LA
Sbjct: 389  CPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGQLA 448

Query: 703  TYMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYIIEDMIHVVESKSTKRYGDYF 524
             YMEVDE T+R+ILLTYKHKTHAVDS GKI+SNADVDF+I +D+IHVVESK   RYGD+F
Sbjct: 449  IYMEVDESTLRTILLTYKHKTHAVDSAGKIMSNADVDFFIDDDVIHVVESKPVNRYGDFF 508

Query: 523  MRHIVKLEEMINDMDRVK 470
            +R IVKLE MIND+DRVK
Sbjct: 509  LRQIVKLEGMINDLDRVK 526


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