BLASTX nr result

ID: Coptis21_contig00005208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005208
         (2018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29002.3| unnamed protein product [Vitis vinifera]              207   8e-51
ref|XP_002268236.1| PREDICTED: E2F-associated phosphoprotein iso...   205   4e-50
ref|XP_003536736.1| PREDICTED: E2F-associated phosphoprotein-lik...   194   6e-47
ref|XP_002307158.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-46
gb|AFS50007.1| hypothetical protein [Dendrobium officinale]           186   3e-44

>emb|CBI29002.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  207 bits (527), Expect = 8e-51
 Identities = 103/155 (66%), Positives = 118/155 (76%), Gaps = 6/155 (3%)
 Frame = -2

Query: 1663 GKFYMDSPTGSQKTISSDDEIDYSIKPEFYDEELDSKDENFVHKKRKGRNISDAVLSCPC 1484
            G+ ++ SPT SQKTIS DDEIDYSIKPEFYD +LD KDE +V KKRKGR  SDAVLSCP 
Sbjct: 3    GEEHLKSPTDSQKTISDDDEIDYSIKPEFYDSDLDEKDELWVQKKRKGRTTSDAVLSCPG 62

Query: 1483 CFTTLCYESQRHEKFVTQYRAVFVENCEIKSDQILRENSRKLKKGKNDLGG------SSV 1322
            CFTTLC E QRHEK+VTQYRA+FV NC IKS+Q+L + S K K+GK           S  
Sbjct: 63   CFTTLCLECQRHEKYVTQYRAIFVVNCNIKSEQVLPQRSIKPKRGKRGRESDKSEPVSVD 122

Query: 1321 GEVFKPVCCLVCATEVGVVDGDEVYHFFNVLPSEA 1217
            GE FKPV C VC+TEVG +D DEVYHFFN+LPSE+
Sbjct: 123  GETFKPVHCGVCSTEVGAIDEDEVYHFFNILPSES 157


>ref|XP_002268236.1| PREDICTED: E2F-associated phosphoprotein isoform 2 [Vitis vinifera]
          Length = 192

 Score =  205 bits (521), Expect = 4e-50
 Identities = 102/153 (66%), Positives = 116/153 (75%), Gaps = 6/153 (3%)
 Frame = -2

Query: 1663 GKFYMDSPTGSQKTISSDDEIDYSIKPEFYDEELDSKDENFVHKKRKGRNISDAVLSCPC 1484
            G+ ++ SPT SQKTIS DDEIDYSIKPEFYD +LD KDE +V KKRKGR  SDAVLSCP 
Sbjct: 25   GEEHLKSPTDSQKTISDDDEIDYSIKPEFYDSDLDEKDELWVQKKRKGRTTSDAVLSCPG 84

Query: 1483 CFTTLCYESQRHEKFVTQYRAVFVENCEIKSDQILRENSRKLKKGKNDLGG------SSV 1322
            CFTTLC E QRHEK+VTQYRA+FV NC IKS+Q+L + S K K+GK           S  
Sbjct: 85   CFTTLCLECQRHEKYVTQYRAIFVVNCNIKSEQVLPQRSIKPKRGKRGRESDKSEPVSVD 144

Query: 1321 GEVFKPVCCLVCATEVGVVDGDEVYHFFNVLPS 1223
            GE FKPV C VC+TEVG +D DEVYHFFN+LPS
Sbjct: 145  GETFKPVHCGVCSTEVGAIDEDEVYHFFNILPS 177


>ref|XP_003536736.1| PREDICTED: E2F-associated phosphoprotein-like [Glycine max]
          Length = 160

 Score =  194 bits (494), Expect = 6e-47
 Identities = 95/151 (62%), Positives = 116/151 (76%), Gaps = 7/151 (4%)
 Frame = -2

Query: 1648 DSPTGSQKTISSDDEIDYSIKPEFYDEELDSKDENFVHKKRKGRNISDAVLSCPCCFTTL 1469
            DSPT SQ+T+S DDEIDY+ KPEFYD +LD  DE ++ KKR G + SDAVLSCP CFTTL
Sbjct: 11   DSPTNSQQTVSDDDEIDYTTKPEFYDPDLDDNDEKWIDKKRHGHD-SDAVLSCPACFTTL 69

Query: 1468 CYESQRHEKFVTQYRAVFVENCEIKSDQILREN---SRKLKKGKNDLGG----SSVGEVF 1310
            C E QRHEK++TQYRAVFV NC+I +D++L++N   SRK  +GK    G    S+  E F
Sbjct: 70   CLECQRHEKYLTQYRAVFVVNCKIGNDKVLKQNTSRSRKRNRGKEGFDGDDAHSTNIETF 129

Query: 1309 KPVCCLVCATEVGVVDGDEVYHFFNVLPSEA 1217
            K VCC VC+TEVGV+D DE+YHFFNVLPSE+
Sbjct: 130  KQVCCSVCSTEVGVIDQDEIYHFFNVLPSES 160


>ref|XP_002307158.1| predicted protein [Populus trichocarpa] gi|222856607|gb|EEE94154.1|
            predicted protein [Populus trichocarpa]
          Length = 149

 Score =  192 bits (488), Expect = 3e-46
 Identities = 94/151 (62%), Positives = 115/151 (76%), Gaps = 6/151 (3%)
 Frame = -2

Query: 1651 MDSPTGSQKTISSDDEIDYSIKPEFYDEELDSKDENFVHKKRKGRNISDAVLSCPCCFTT 1472
            M SP+ SQ+TIS DDEIDYS+KPEFYD ELD KDE +V KKRKG N SDAVLSCP CFTT
Sbjct: 1    MGSPSNSQQTISDDDEIDYSVKPEFYDPELDDKDELWVQKKRKGSN-SDAVLSCPACFTT 59

Query: 1471 LCYESQRHEKFVTQYRAVFVENCEIKSDQIL------RENSRKLKKGKNDLGGSSVGEVF 1310
            LC + QRHE+FVTQYRA+FV NC++ S+++       + N R  + G+N+    + GE F
Sbjct: 60   LCLDCQRHERFVTQYRAIFVVNCKVDSNKVQHSRQKPKRNKRSREAGENE-ADLADGETF 118

Query: 1309 KPVCCLVCATEVGVVDGDEVYHFFNVLPSEA 1217
            K VCC VC+TEVGV+D D+VYHFFN LPSE+
Sbjct: 119  KAVCCSVCSTEVGVIDEDDVYHFFNALPSES 149


>gb|AFS50007.1| hypothetical protein [Dendrobium officinale]
          Length = 170

 Score =  186 bits (471), Expect = 3e-44
 Identities = 88/148 (59%), Positives = 111/148 (75%), Gaps = 6/148 (4%)
 Frame = -2

Query: 1642 PTGSQKTISSDDEIDYSIKPEFYDEELDSKDENFVHKKRKGRNISDAVLSCPCCFTTLCY 1463
            P    + ISSDDEIDYSIKPEFYD  LD KDE +++K+RKGR  SDAVLSCP CFTTLC+
Sbjct: 24   PENPWELISSDDEIDYSIKPEFYDPLLDEKDEQWMNKQRKGRT-SDAVLSCPACFTTLCF 82

Query: 1462 ESQRHEKFVTQYRAVFVENCEIKSDQILRENSRKLKKGKNDLGGSSVGE------VFKPV 1301
            + QRHEK+VTQYRA+FV NC +++DQILRE S++ +K K  +    + +      +F+PV
Sbjct: 83   DCQRHEKYVTQYRAMFVVNCSVRTDQILREPSKRKRKSKKLIDSGKIQQDLHNDVIFRPV 142

Query: 1300 CCLVCATEVGVVDGDEVYHFFNVLPSEA 1217
            CC VC+TEVG  D DEVYHF NV+PS +
Sbjct: 143  CCSVCSTEVGAFDKDEVYHFINVIPSNS 170


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