BLASTX nr result

ID: Coptis21_contig00005206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005206
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281599.1| PREDICTED: indole-3-glycerol phosphate lyase...   409   e-112
gb|AFK33699.1| unknown [Lotus japonicus]                              408   e-111
gb|ACJ02771.1| indole-3-glycerol phosphate lyase IGL1vs2 [Consol...   407   e-111
emb|CBI17927.3| unnamed protein product [Vitis vinifera]              406   e-111
emb|CAN60260.1| hypothetical protein VITISV_007742 [Vitis vinifera]   404   e-110

>ref|XP_002281599.1| PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic [Vitis
            vinifera]
          Length = 316

 Score =  409 bits (1050), Expect = e-112
 Identities = 208/285 (72%), Positives = 240/285 (84%)
 Frame = -3

Query: 1038 TKITTSSSLVPVMASLSITTPVVGLSQTFTRLRQQGKVAFIPYITAGDPDLKTTAEALKV 859
            T+++ S      MA+++   P VGLS+TF +LR+QG+VA IPYITAGDPDL TTAEALKV
Sbjct: 32   TRLSVSFKAFKPMAAVA-AVPAVGLSETFDKLRKQGQVALIPYITAGDPDLSTTAEALKV 90

Query: 858  LDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGTNLNAIFSMLKEIIPQMSCPIALF 679
            LDSCGSDIIELG+PYSDPLADGPVIQAAATR+LA+GTNLNA+ SMLKE++PQ+SCP+ALF
Sbjct: 91   LDSCGSDIIELGLPYSDPLADGPVIQAAATRSLARGTNLNAVISMLKEVVPQLSCPVALF 150

Query: 678  TYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETEILRKEALKNEIELVXXXXXXXXT 499
            +YYNPILKRGIG FM  IKDVGVHGLVVPDVPLEETEILR E++KN IELV         
Sbjct: 151  SYYNPILKRGIGKFMTIIKDVGVHGLVVPDVPLEETEILRMESIKNNIELVLLTTPTTPI 210

Query: 498  DRMKAIVEASDGFVYLVSSIGVTGAXXXXXXXXXXXXQEIKEASNKPVAVGFGISAPDHV 319
            DRMKAIV AS+GFVYLVSS+GVTGA            QEIK+A++KPVAVGFGIS P+HV
Sbjct: 211  DRMKAIVAASEGFVYLVSSVGVTGARASVSSRVQTLLQEIKQATSKPVAVGFGISKPEHV 270

Query: 318  KQLVGWGADGVIVGSAMVKLLGDAKSPEEGLKELEAFTRSLKAAL 184
            KQ+V WGADGVIVGSAMVK+LG+AKSPEEGLKELE FT+SLK+AL
Sbjct: 271  KQVVAWGADGVIVGSAMVKVLGEAKSPEEGLKELETFTKSLKSAL 315


>gb|AFK33699.1| unknown [Lotus japonicus]
          Length = 311

 Score =  408 bits (1048), Expect = e-111
 Identities = 214/314 (68%), Positives = 247/314 (78%), Gaps = 4/314 (1%)
 Frame = -3

Query: 1110 MAVALKPTCXXXXXXXXXXXXXLPTKITTSSSLVPVMASLSI----TTPVVGLSQTFTRL 943
            MA+ALK +C              P   ++  +++ V  +  +    T   VGLS+TF+RL
Sbjct: 1    MAIALKSSCFFQVKKPEAGF---PVYFSSKKAIIWVKRNTPVAAIRTMETVGLSETFSRL 57

Query: 942  RQQGKVAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRA 763
            ++QGKVAFIPYITAGDPDL TTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR+
Sbjct: 58   KKQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRS 117

Query: 762  LAKGTNLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVP 583
            LA+GTN NAI SMLKE+ PQ+SCP+ALF+YYNPILKRG   FM+TI+D GVHGLVVPDVP
Sbjct: 118  LARGTNFNAIISMLKEVTPQLSCPVALFSYYNPILKRGTDKFMSTIRDSGVHGLVVPDVP 177

Query: 582  LEETEILRKEALKNEIELVXXXXXXXXTDRMKAIVEASDGFVYLVSSIGVTGAXXXXXXX 403
            LEETEILR EA KN IELV         DRMKAIV+A++GFVYLVSS+GVTGA       
Sbjct: 178  LEETEILRTEAKKNGIELVLLTTPTTPIDRMKAIVDAAEGFVYLVSSVGVTGARASVSDK 237

Query: 402  XXXXXQEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLK 223
                 QEIKEA++KPVAVGFGIS P+HV+Q+ GWGADGVIVGSAMVK+LGDAKSP+EGLK
Sbjct: 238  VQALLQEIKEATSKPVAVGFGISKPEHVEQVAGWGADGVIVGSAMVKILGDAKSPQEGLK 297

Query: 222  ELEAFTRSLKAALP 181
            ELE FTRSLK+ALP
Sbjct: 298  ELENFTRSLKSALP 311


>gb|ACJ02771.1| indole-3-glycerol phosphate lyase IGL1vs2 [Consolida orientalis]
          Length = 319

 Score =  407 bits (1046), Expect = e-111
 Identities = 211/290 (72%), Positives = 243/290 (83%), Gaps = 4/290 (1%)
 Frame = -3

Query: 1038 TKITTSSSLVPVMASLSITTPV----VGLSQTFTRLRQQGKVAFIPYITAGDPDLKTTAE 871
            + I+T S +   MASL++  P     V LS+TF RL++QG+VAFIP+ITAGDPDL TTAE
Sbjct: 32   SNISTKSRIS--MASLAVAPPTAATAVSLSETFIRLKEQGRVAFIPFITAGDPDLSTTAE 89

Query: 870  ALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGTNLNAIFSMLKEIIPQMSCP 691
            ALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR LA+GTN +AI +ML+ ++PQ+SCP
Sbjct: 90   ALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRVLARGTNFDAILAMLEGVVPQLSCP 149

Query: 690  IALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETEILRKEALKNEIELVXXXXX 511
            +ALF+YYNPILKRGIG FM TIKDVGVHGLVVPDVPLEET +LR+EALKN+IEL+     
Sbjct: 150  LALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVPLEETAMLREEALKNQIELILLTTP 209

Query: 510  XXXTDRMKAIVEASDGFVYLVSSIGVTGAXXXXXXXXXXXXQEIKEASNKPVAVGFGISA 331
               TDRMKAIVEAS+GFVYLVSSIGVTG+            QEIKEASNKPVAVGFGIS 
Sbjct: 210  TTPTDRMKAIVEASEGFVYLVSSIGVTGSRASVSSRVQSLLQEIKEASNKPVAVGFGIST 269

Query: 330  PDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLKELEAFTRSLKAALP 181
            P+HVKQ+ GWGADGVIVGSAMV+LL  AK+PEEGLKELEAFT+SL+AA+P
Sbjct: 270  PEHVKQIAGWGADGVIVGSAMVELLAHAKTPEEGLKELEAFTKSLRAAIP 319


>emb|CBI17927.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  406 bits (1043), Expect = e-111
 Identities = 204/265 (76%), Positives = 230/265 (86%)
 Frame = -3

Query: 978 PVVGLSQTFTRLRQQGKVAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLA 799
           P VGLS+TF +LR+QG+VA IPYITAGDPDL TTAEALKVLDSCGSDIIELG+PYSDPLA
Sbjct: 8   PAVGLSETFDKLRKQGQVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGLPYSDPLA 67

Query: 798 DGPVIQAAATRALAKGTNLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKD 619
           DGPVIQAAATR+LA+GTNLNA+ SMLKE++PQ+SCP+ALF+YYNPILKRGIG FM  IKD
Sbjct: 68  DGPVIQAAATRSLARGTNLNAVISMLKEVVPQLSCPVALFSYYNPILKRGIGKFMTIIKD 127

Query: 618 VGVHGLVVPDVPLEETEILRKEALKNEIELVXXXXXXXXTDRMKAIVEASDGFVYLVSSI 439
           VGVHGLVVPDVPLEETEILR E++KN IELV         DRMKAIV AS+GFVYLVSS+
Sbjct: 128 VGVHGLVVPDVPLEETEILRMESIKNNIELVLLTTPTTPIDRMKAIVAASEGFVYLVSSV 187

Query: 438 GVTGAXXXXXXXXXXXXQEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKL 259
           GVTGA            QEIK+A++KPVAVGFGIS P+HVKQ+V WGADGVIVGSAMVK+
Sbjct: 188 GVTGARASVSSRVQTLLQEIKQATSKPVAVGFGISKPEHVKQVVAWGADGVIVGSAMVKV 247

Query: 258 LGDAKSPEEGLKELEAFTRSLKAAL 184
           LG+AKSPEEGLKELE FT+SLK+AL
Sbjct: 248 LGEAKSPEEGLKELETFTKSLKSAL 272


>emb|CAN60260.1| hypothetical protein VITISV_007742 [Vitis vinifera]
          Length = 273

 Score =  404 bits (1039), Expect = e-110
 Identities = 203/265 (76%), Positives = 229/265 (86%)
 Frame = -3

Query: 978 PVVGLSQTFTRLRQQGKVAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLA 799
           P VGLS+TF +LR+QG+VA IPYITAGDPDL TTAEALKVLDSCGSDIIELG+PYSDPLA
Sbjct: 8   PAVGLSETFDKLRKQGQVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGLPYSDPLA 67

Query: 798 DGPVIQAAATRALAKGTNLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKD 619
           DGPVIQAAATR+LA+GTN NA+ SMLKE++PQ+SCP+ALF+YYNPILKRGIG FM  IKD
Sbjct: 68  DGPVIQAAATRSLARGTNFNAVISMLKEVVPQLSCPVALFSYYNPILKRGIGKFMTIIKD 127

Query: 618 VGVHGLVVPDVPLEETEILRKEALKNEIELVXXXXXXXXTDRMKAIVEASDGFVYLVSSI 439
           VGVHGLVVPDVPLEETEILR E++KN IELV         DRMKAIV AS+GFVYLVSS+
Sbjct: 128 VGVHGLVVPDVPLEETEILRMESIKNNIELVLLTTPTTPIDRMKAIVAASEGFVYLVSSV 187

Query: 438 GVTGAXXXXXXXXXXXXQEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKL 259
           GVTGA            QEIK+A++KPVAVGFGIS P+HVKQ+V WGADGVIVGSAMVK+
Sbjct: 188 GVTGARASVSSRVQTLLQEIKQATSKPVAVGFGISKPEHVKQVVAWGADGVIVGSAMVKV 247

Query: 258 LGDAKSPEEGLKELEAFTRSLKAAL 184
           LG+AKSPEEGLKELE FT+SLK+AL
Sbjct: 248 LGEAKSPEEGLKELETFTKSLKSAL 272


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