BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005188
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|2...   294   2e-77
ref|NP_174575.1| 50S ribosomal protein L11 [Arabidopsis thaliana...   293   3e-77
ref|XP_002891023.1| hypothetical protein ARALYDRAFT_473481 [Arab...   292   6e-77
ref|XP_002518942.1| 50S robosomal protein L11, putative [Ricinus...   291   1e-76
ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloro...   290   3e-76

>ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|222846234|gb|EEE83781.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  294 bits (752), Expect = 2e-77
 Identities = 150/167 (89%), Positives = 155/167 (92%)
 Frame = +2

Query: 185 STPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKD 364
           ST  R L V AMAPPK  GK KKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKD
Sbjct: 4   STAPRRLSVIAMAPPKPGGKAKKVIGLIKLALEAGKATPAPPVGPALGSKGVNIMAFCKD 63

Query: 365 YNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPKLEKVGTVT 544
           YNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPK+EKVG VT
Sbjct: 64  YNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPKMEKVGKVT 123

Query: 545 NDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 685
            DQ+RTIA EKLPDLNCT+IESAMRIIAGTAANMGI VDPP+LEPKK
Sbjct: 124 IDQLRTIATEKLPDLNCTTIESAMRIIAGTAANMGIDVDPPILEPKK 170


>ref|NP_174575.1| 50S ribosomal protein L11 [Arabidopsis thaliana]
           gi|38605500|sp|Q9MAP3.1|RK11_ARATH RecName: Full=50S
           ribosomal protein L11, chloroplastic; AltName:
           Full=CL11; Flags: Precursor
           gi|6910575|gb|AAF31280.1|AC006424_9 Very similar to
           Spinacia oleracea 50S ribosomal p> [Arabidopsis
           thaliana] gi|11762194|gb|AAG40375.1|AF325023_1 At1g32990
           [Arabidopsis thaliana]
           gi|13877983|gb|AAK44069.1|AF370254_1 putative ribosomal
           protein L11 [Arabidopsis thaliana]
           gi|15724330|gb|AAL06558.1|AF412105_1 At1g32990/F9L11_15
           [Arabidopsis thaliana] gi|17104711|gb|AAL34244.1|
           putative ribosomal protein L11 [Arabidopsis thaliana]
           gi|21553791|gb|AAM62884.1| ribosomal protein L11,
           putative [Arabidopsis thaliana]
           gi|332193427|gb|AEE31548.1| 50S ribosomal protein L11
           [Arabidopsis thaliana]
          Length = 222

 Score =  293 bits (751), Expect = 3e-77
 Identities = 147/177 (83%), Positives = 160/177 (90%)
 Frame = +2

Query: 155 FLNQKHSSSFSTPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSK 334
           FL +K S   S+  R L V AMAPPK  GK KKV+G+IKLALEAGKATPAPPVGPALGSK
Sbjct: 41  FLGKKQSPLLSSTPRFLTVIAMAPPKPGGKAKKVVGVIKLALEAGKATPAPPVGPALGSK 100

Query: 335 GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKD 514
           GVNIMAFCKDYNARTADKAGY+IPVEITV+DDKSFTFILKTPPASVLLLKAAGVEKGSKD
Sbjct: 101 GVNIMAFCKDYNARTADKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKD 160

Query: 515 PKLEKVGTVTNDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 685
           P+ +KVG +T DQ+RTIAAEKLPDLNCT+IESAMRIIAGTAANMGI +DPP+LEPKK
Sbjct: 161 PQQDKVGVITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKK 217


>ref|XP_002891023.1| hypothetical protein ARALYDRAFT_473481 [Arabidopsis lyrata subsp.
           lyrata] gi|297336865|gb|EFH67282.1| hypothetical protein
           ARALYDRAFT_473481 [Arabidopsis lyrata subsp. lyrata]
          Length = 222

 Score =  292 bits (748), Expect = 6e-77
 Identities = 146/177 (82%), Positives = 160/177 (90%)
 Frame = +2

Query: 155 FLNQKHSSSFSTPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSK 334
           FL +K S   S+  R L V AMAPPK  GK KKV+G+IKLALEAGKATPAPPVGPALGSK
Sbjct: 41  FLGKKQSPLLSSTPRFLTVIAMAPPKPGGKAKKVVGVIKLALEAGKATPAPPVGPALGSK 100

Query: 335 GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKD 514
           GVNIMAFCKDYNARTADKAGY+IPVEITV+DDKSFTFILKTPPASVLLLKAAGV+KGSKD
Sbjct: 101 GVNIMAFCKDYNARTADKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVDKGSKD 160

Query: 515 PKLEKVGTVTNDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 685
           P+ +KVG +T DQ+RTIAAEKLPDLNCT+IESAMRIIAGTAANMGI +DPP+LEPKK
Sbjct: 161 PQQDKVGVITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKK 217


>ref|XP_002518942.1| 50S robosomal protein L11, putative [Ricinus communis]
           gi|223541929|gb|EEF43475.1| 50S robosomal protein L11,
           putative [Ricinus communis]
          Length = 221

 Score =  291 bits (746), Expect = 1e-76
 Identities = 145/172 (84%), Positives = 158/172 (91%)
 Frame = +2

Query: 170 HSSSFSTPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIM 349
           H  +  TPRR L V AMAPPK +GK KK +G+IKLALEAGKATPAPPVGPALG+KGVNIM
Sbjct: 46  HHKTSQTPRRRLSVIAMAPPKPAGKAKKAVGLIKLALEAGKATPAPPVGPALGAKGVNIM 105

Query: 350 AFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPKLEK 529
           AFCKDYNA+TADKAGY+IPVEITVYDD+SFTFILKTPPASVLLLKAAGVEKGSKDP++EK
Sbjct: 106 AFCKDYNAKTADKAGYIIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPQIEK 165

Query: 530 VGTVTNDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 685
           VG VT +Q+R IAAEKLPDLNCTSIESAMRIIAGTAANMGI V+PPVLEPKK
Sbjct: 166 VGKVTIEQLRAIAAEKLPDLNCTSIESAMRIIAGTAANMGIDVEPPVLEPKK 217


>ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Vitis
           vinifera]
          Length = 217

 Score =  290 bits (742), Expect = 3e-76
 Identities = 148/177 (83%), Positives = 156/177 (88%)
 Frame = +2

Query: 155 FLNQKHSSSFSTPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSK 334
           FL  K     S+  R L V +MAPPK  GK+KKV GMIKLALEAGKATPAPPVGPALGSK
Sbjct: 37  FLPTKKCPFLSSTPRALTVISMAPPKPGGKSKKVTGMIKLALEAGKATPAPPVGPALGSK 96

Query: 335 GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKD 514
           GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTF+LKTPPASVLLLKAAG EKG+KD
Sbjct: 97  GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGAEKGAKD 156

Query: 515 PKLEKVGTVTNDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 685
           PK EKVG +T +Q+RTIA EKLPDLNCTSIESAMRIIAGTAANMGI VDPPVLEPKK
Sbjct: 157 PKQEKVGKITIEQLRTIATEKLPDLNCTSIESAMRIIAGTAANMGIEVDPPVLEPKK 213