BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005186
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...   229   7e-58
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   229   1e-57
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...   221   2e-55
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   216   7e-54
ref|XP_002512958.1| RNA-binding protein, putative [Ricinus commu...   209   1e-51

>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score =  229 bits (585), Expect = 7e-58
 Identities = 130/292 (44%), Positives = 170/292 (58%)
 Frame = +3

Query: 3    DAVLSRASKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEFTEHQHALVALRVLNNNPE 182
            DAV+SRA+KQ PVIRQIKFL N KKG V  + YSRGVAFVEF+EHQHALVALRVLNNNPE
Sbjct: 672  DAVVSRATKQKPVIRQIKFLKNEKKGNVAQERYSRGVAFVEFSEHQHALVALRVLNNNPE 731

Query: 183  TFGPEHRPIVEFALDNVQTLKVRKFKLQAQQDNHTSAEDGLQNTTSEISDTRPNYKDKNI 362
            TFGPEHRPIVEFALDNVQTLK+RK KLQ+Q        + + N      +     KD   
Sbjct: 732  TFGPEHRPIVEFALDNVQTLKLRKAKLQSQHQTPQVDNNAMDNDNPGTVEGCKPVKD--- 788

Query: 363  NRKTKSKGHDISSETLVSSKGDEGEVKFPKGAADKDLSANRKLTRERKGKFISKDKIVGS 542
             RK KS+ HD  ++  V +   E  V    G + +   + R+    +  K + +++    
Sbjct: 789  -RKRKSREHDEPAKESVLNTNGESGVAVANGKSPQGHKSKRQKGNNKSKKALKENREAAL 847

Query: 543  SRNPNSNGEGAETNVGKSVTGANVGNGIRELRSKQNMRVDFKKRKLDDVMEXXXXXXXXX 722
            S  P +N E    N G S+ G N        +S     V F+KRK+ +  +         
Sbjct: 848  SMKPKNN-ENGHNNGGASLEGQNTATDSNRRKSGNKDDVGFRKRKMQNQEQEAGQKVLKK 906

Query: 723  XXXXXXXXXXXEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 878
                       +VVDKLD+L+EQY+SKFS K    ++GEK+ S+QL++WF+S
Sbjct: 907  RLKKNKGSVGKDVVDKLDMLVEQYKSKFSHKGSLENDGEKRHSKQLRKWFQS 958


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  229 bits (583), Expect = 1e-57
 Identities = 141/296 (47%), Positives = 186/296 (62%), Gaps = 4/296 (1%)
 Frame = +3

Query: 3    DAVLSRASKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEFTEHQHALVALRVLNNNPE 182
            DAV SRA+KQ P+I+QIKFL + KKGKV +KN+SRGVAF+EFTEHQHALVALRVLNNNPE
Sbjct: 685  DAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVALRVLNNNPE 744

Query: 183  TFGPEHRPIVEFALDNVQTLKVRKFKLQA-QQDNHTSAEDGLQNTTSEISDTRPNYKDKN 359
            TFGPEHRPIVEFALDN+QTL+ R+ KL+A QQ NH   ED   N      +  PN K K 
Sbjct: 745  TFGPEHRPIVEFALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPNTPEASPNKKMK- 803

Query: 360  INRKTKSKGHDISSETLVSSKGDEGEVKFPKGAA-DKDLSANRKLTRERKGKFISKDKIV 536
             +RK KS+ +D   +T   ++GDE E K  KGA  D+  +A +      K K   KDK  
Sbjct: 804  -SRKRKSRDNDGPLKTSEPNEGDEPEDKVIKGAVIDRHGAAKKHKINPAKEK--QKDK-- 858

Query: 537  GSSRNPNSNGEGAETNVGKSVTGANVGNGIRELRSKQNMRVDFKKRKLDD--VMEXXXXX 710
               +  NS+G G + +  K +   +  +  R  +S +   +  KKRKL +   ++     
Sbjct: 859  -RKKLNNSHGIG-KPDDEKPLKAESTISKARNSKSSEESNMLPKKRKLQEHIAVQEGKSP 916

Query: 711  XXXXXXXXXXXXXXXEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 878
                            ++DKLD+L+EQYR+KFSQ+  + ++G+KQGSRQLKRWF+S
Sbjct: 917  KQKTRTRRSKDPSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQGSRQLKRWFQS 972


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score =  221 bits (564), Expect = 2e-55
 Identities = 135/301 (44%), Positives = 175/301 (58%), Gaps = 9/301 (2%)
 Frame = +3

Query: 3    DAVLSRASKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEFTEHQHALVALRVLNNNPE 182
            DAV+SRA+KQ PVIRQIKFL N KKG V  + YSRGVAFVEF+EHQHALVALRVLNNNPE
Sbjct: 671  DAVISRATKQKPVIRQIKFLKNEKKGNVAQERYSRGVAFVEFSEHQHALVALRVLNNNPE 730

Query: 183  TFGPEHRPIVEFALDNVQTLKVRKFKLQAQ----QDNHTSAEDGLQNTTSEISDTRPNYK 350
            TFGPEHRPIVEFALDNVQTLK+RK KLQ+Q    QD++ + ++    T       +    
Sbjct: 731  TFGPEHRPIVEFALDNVQTLKLRKAKLQSQLQAPQDDNNAMDNDKPGTVEGHKPVK---- 786

Query: 351  DKNINRKTKSKGHD-ISSETLVSSKGDEGEV----KFPKGAADKDLSANRKLTRERKGKF 515
                NRK KS+ HD  + E+ +++ G+ G      K P+G   K    N       K K 
Sbjct: 787  ----NRKRKSQEHDKPAMESALNTNGELGVAVSNGKSPQGHKSKRQKGN------NKSKK 836

Query: 516  ISKDKIVGSSRNPNSNGEGAETNVGKSVTGANVGNGIRELRSKQNMRVDFKKRKLDDVME 695
              K+     S  P +N E  ++N G S+ G N        +S       F+KRK+ +  +
Sbjct: 837  ALKENPEALSMKPKNN-ENGQSNGGASLEGQNTATYSNRRKSGNREDWGFRKRKIQNQEQ 895

Query: 696  XXXXXXXXXXXXXXXXXXXXEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFE 875
                                +V DKLD+LIEQYRSKFS K    ++GE++ S+QL++WF+
Sbjct: 896  EAGQKVSKKRPKKNKDSVGKDVGDKLDMLIEQYRSKFSHKGSQENDGERKPSKQLRKWFQ 955

Query: 876  S 878
            S
Sbjct: 956  S 956


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
            predicted protein [Populus trichocarpa]
          Length = 974

 Score =  216 bits (551), Expect = 7e-54
 Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 5/297 (1%)
 Frame = +3

Query: 3    DAVLSRASKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEFTEHQHALVALRVLNNNPE 182
            DAV SRA+KQ PVIRQ+KFL N KKGKV +K++SRGVAFVEFTEHQHALVALRVLNNNPE
Sbjct: 680  DAVTSRATKQKPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEHQHALVALRVLNNNPE 739

Query: 183  TFGPEHRPIVEFALDNVQTLKVRKFKLQA-QQDNHTSAEDGLQNTTSEISDTRPNYKDKN 359
            TFGPEHRPIV FALDNVQTLK+RK KLQ  QQ+ H   +D  +N  S+  +  P+ K+  
Sbjct: 740  TFGPEHRPIVSFALDNVQTLKLRKAKLQVQQQETHKDFQDTQENDESQTPNAIPSQKE-- 797

Query: 360  INRKTKSKGHDISSETLVSSKGDEGEVKFPKGAADKDLSANRKLTRERKGKFISKDKIVG 539
            ++RK KS+  + + +   S++ DE + K     + K+ +A +K +        +  K   
Sbjct: 798  MSRKRKSRVENRAVKDPESNRMDEVKNKDSYRTSLKEQTAKKKKSNPGAEDIQTSAKDKR 857

Query: 540  SSRNPNSNG-EGAETNVGKSVTGANVGNGIRELRSKQNMRVDFKKRKLDDVME---XXXX 707
             SR   + G +  + + G+   G N  N  + ++  +   +   KRK  +  E       
Sbjct: 858  ESREQKAKGSQHKQKDEGRKSDGGNSVNSEKIVKPFKEADLWLTKRKRPNQTEENKGGKS 917

Query: 708  XXXXXXXXXXXXXXXXEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 878
                            +V DKLD+LIEQY+SKFS++  +  EGEKQ ++QLKRWF+S
Sbjct: 918  SEKRKRPKKNKDPVGQDVADKLDMLIEQYKSKFSKQTADKPEGEKQANKQLKRWFQS 974


>ref|XP_002512958.1| RNA-binding protein, putative [Ricinus communis]
            gi|223547969|gb|EEF49461.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 916

 Score =  209 bits (532), Expect = 1e-51
 Identities = 133/304 (43%), Positives = 182/304 (59%), Gaps = 12/304 (3%)
 Frame = +3

Query: 3    DAVLSRASKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEFTEHQHALVALRVLNNNPE 182
            DAV+SRA+KQ PVIRQIKFL ++K GKV +KN+SRGVAF+EFTEHQHALVALRVLNNNPE
Sbjct: 617  DAVISRATKQKPVIRQIKFLQSTKTGKV-TKNHSRGVAFIEFTEHQHALVALRVLNNNPE 675

Query: 183  TFGPEHRPIVEFALDNVQTLKVRKFKLQA-QQDNHTSAEDGLQNTTSEISDTRPNYKDKN 359
            TFGPEHRPIVEFA+DNVQ LK RK KL A QQDN+  ++D   N  S   +  P  K+  
Sbjct: 676  TFGPEHRPIVEFAVDNVQKLKFRKAKLHAQQQDNNADSKDMQDNIESHAPNDIPGEKEN- 734

Query: 360  INRKTKSKGHDISSETLVSSKGDEGEVKFPKGAADKDLSANRKL--TRERKGKFISKDKI 533
              RK KS+  + + +T   ++  E E+   +G + + +S  ++   T   K K  +K+K 
Sbjct: 735  -FRKWKSRADNRAMKTSEPNE-TEVEILVSEGTSSEKISTKKRKRNTGSDKRKTATKEKF 792

Query: 534  VGS------SRNPNSNGEGAETNVGKSVTGANVGNGIRELRSKQNMRVDFKKRK---LDD 686
             G+      S +  ++ +  + +VG SV G  +G   R+ +  +   +  +KRK      
Sbjct: 793  DGAKQKVKDSVDKQNHHQVRKPDVGDSVKGELMGKITRKSQPLEEAGLRLQKRKPLSQGK 852

Query: 687  VMEXXXXXXXXXXXXXXXXXXXXEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKR 866
              E                    +VVDKLD+LIEQYRSKFS++     + EKQ ++  KR
Sbjct: 853  QQEGEENSKRRKRLKKNKDPVGRDVVDKLDMLIEQYRSKFSKRTSEKPDDEKQANKPRKR 912

Query: 867  WFES 878
            WF+S
Sbjct: 913  WFQS 916