BLASTX nr result

ID: Coptis21_contig00005180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005180
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like ...    84   1e-14
ref|XP_002517637.1| GTP binding protein, putative [Ricinus commu...    84   2e-14
emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera]    83   3e-14
ref|XP_002298251.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Viti...    80   2e-13

>ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus]
           gi|449509285|ref|XP_004163545.1| PREDICTED: protein
           LURP-one-related 12-like [Cucumis sativus]
          Length = 206

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = +2

Query: 2   CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEFG 181
           C  ++A++E VAE++RK +A+ NVV GKDVF+L++KPGFD AFAMGLVL+LDQI+   F 
Sbjct: 135 CTIFDAAKEAVAEIKRKVDATTNVVLGKDVFSLIIKPGFDGAFAMGLVLVLDQINGDSF- 193

Query: 182 LFDDGEDQVQD 214
              D ED   D
Sbjct: 194 ---DDEDTEMD 201


>ref|XP_002517637.1| GTP binding protein, putative [Ricinus communis]
           gi|223543269|gb|EEF44801.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 206

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/73 (56%), Positives = 54/73 (73%)
 Frame = +2

Query: 2   CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEFG 181
           C F+NA +E VAE+RRK + S +VV GKDVF+L +KPGFD AFAMGLVL+LDQI      
Sbjct: 135 CTFFNAVKESVAEIRRKVDTSTHVVLGKDVFSLCLKPGFDGAFAMGLVLVLDQI------ 188

Query: 182 LFDDGEDQVQDQA 220
              +G+D V+D++
Sbjct: 189 ---NGDDYVEDES 198


>emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera]
          Length = 207

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
 Frame = +2

Query: 2   CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI--DFSE 175
           C  +NA++E VAE+RRK +AS +V+ GKDVFTL +KPGFD AFAMGLVL+LDQI  D+ +
Sbjct: 134 CTIFNATKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFDGAFAMGLVLVLDQISDDYED 193

Query: 176 FGL 184
            GL
Sbjct: 194 DGL 196


>ref|XP_002298251.1| predicted protein [Populus trichocarpa] gi|222845509|gb|EEE83056.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/54 (68%), Positives = 45/54 (83%)
 Frame = +2

Query: 2   CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI 163
           C  +NA +E +AE+RRK +AS NV+ GKDVF+L +KPGFD AFAMGLVLILDQI
Sbjct: 134 CTIFNAEKESMAEIRRKVDASTNVLLGKDVFSLCLKPGFDGAFAMGLVLILDQI 187


>ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Vitis vinifera]
           gi|297743462|emb|CBI36329.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/63 (61%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
 Frame = +2

Query: 2   CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI--DFSE 175
           C  +NA++E VAE+RRK +AS +V+ GKDVFTL +KPGF  AFAMGLVL+LDQI  D+ +
Sbjct: 134 CTIFNAAKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFGGAFAMGLVLVLDQISDDYED 193

Query: 176 FGL 184
            GL
Sbjct: 194 DGL 196


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