BLASTX nr result
ID: Coptis21_contig00005180
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005180 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like ... 84 1e-14 ref|XP_002517637.1| GTP binding protein, putative [Ricinus commu... 84 2e-14 emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera] 83 3e-14 ref|XP_002298251.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Viti... 80 2e-13 >ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus] gi|449509285|ref|XP_004163545.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus] Length = 206 Score = 84.0 bits (206), Expect = 1e-14 Identities = 40/71 (56%), Positives = 53/71 (74%) Frame = +2 Query: 2 CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEFG 181 C ++A++E VAE++RK +A+ NVV GKDVF+L++KPGFD AFAMGLVL+LDQI+ F Sbjct: 135 CTIFDAAKEAVAEIKRKVDATTNVVLGKDVFSLIIKPGFDGAFAMGLVLVLDQINGDSF- 193 Query: 182 LFDDGEDQVQD 214 D ED D Sbjct: 194 ---DDEDTEMD 201 >ref|XP_002517637.1| GTP binding protein, putative [Ricinus communis] gi|223543269|gb|EEF44801.1| GTP binding protein, putative [Ricinus communis] Length = 206 Score = 83.6 bits (205), Expect = 2e-14 Identities = 41/73 (56%), Positives = 54/73 (73%) Frame = +2 Query: 2 CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEFG 181 C F+NA +E VAE+RRK + S +VV GKDVF+L +KPGFD AFAMGLVL+LDQI Sbjct: 135 CTFFNAVKESVAEIRRKVDTSTHVVLGKDVFSLCLKPGFDGAFAMGLVLVLDQI------ 188 Query: 182 LFDDGEDQVQDQA 220 +G+D V+D++ Sbjct: 189 ---NGDDYVEDES 198 >emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera] Length = 207 Score = 82.8 bits (203), Expect = 3e-14 Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 2/63 (3%) Frame = +2 Query: 2 CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI--DFSE 175 C +NA++E VAE+RRK +AS +V+ GKDVFTL +KPGFD AFAMGLVL+LDQI D+ + Sbjct: 134 CTIFNATKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFDGAFAMGLVLVLDQISDDYED 193 Query: 176 FGL 184 GL Sbjct: 194 DGL 196 >ref|XP_002298251.1| predicted protein [Populus trichocarpa] gi|222845509|gb|EEE83056.1| predicted protein [Populus trichocarpa] Length = 201 Score = 80.1 bits (196), Expect = 2e-13 Identities = 37/54 (68%), Positives = 45/54 (83%) Frame = +2 Query: 2 CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI 163 C +NA +E +AE+RRK +AS NV+ GKDVF+L +KPGFD AFAMGLVLILDQI Sbjct: 134 CTIFNAEKESMAEIRRKVDASTNVLLGKDVFSLCLKPGFDGAFAMGLVLILDQI 187 >ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Vitis vinifera] gi|297743462|emb|CBI36329.3| unnamed protein product [Vitis vinifera] Length = 207 Score = 80.1 bits (196), Expect = 2e-13 Identities = 39/63 (61%), Positives = 50/63 (79%), Gaps = 2/63 (3%) Frame = +2 Query: 2 CDFYNASREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI--DFSE 175 C +NA++E VAE+RRK +AS +V+ GKDVFTL +KPGF AFAMGLVL+LDQI D+ + Sbjct: 134 CTIFNAAKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFGGAFAMGLVLVLDQISDDYED 193 Query: 176 FGL 184 GL Sbjct: 194 DGL 196