BLASTX nr result

ID: Coptis21_contig00005179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005179
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera]    88   8e-16
ref|XP_002517637.1| GTP binding protein, putative [Ricinus commu...    84   1e-14
ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like ...    84   2e-14
ref|NP_001236323.1| uncharacterized protein LOC100527456 [Glycin...    83   2e-14
ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Viti...    83   2e-14

>emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera]
          Length = 207

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 2/64 (3%)
 Frame = +2

Query: 2   CCDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI--DFS 175
           CC  +NAT+E VAE+RRK +AS +V+ GKDVFTL +KPGFD AFAMGLVL+LDQI  D+ 
Sbjct: 133 CCTIFNATKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFDGAFAMGLVLVLDQISDDYE 192

Query: 176 EFGL 187
           + GL
Sbjct: 193 DDGL 196


>ref|XP_002517637.1| GTP binding protein, putative [Ricinus communis]
           gi|223543269|gb|EEF44801.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 206

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = +2

Query: 5   CDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEFG 184
           C F+NA +E VAE+RRK + S +VV GKDVF+L +KPGFD AFAMGLVL+LDQI      
Sbjct: 135 CTFFNAVKESVAEIRRKVDTSTHVVLGKDVFSLCLKPGFDGAFAMGLVLVLDQI------ 188

Query: 185 LFDDGEDQVQDQ 220
              +G+D V+D+
Sbjct: 189 ---NGDDYVEDE 197


>ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus]
           gi|449509285|ref|XP_004163545.1| PREDICTED: protein
           LURP-one-related 12-like [Cucumis sativus]
          Length = 206

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/71 (56%), Positives = 52/71 (73%)
 Frame = +2

Query: 5   CDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEFG 184
           C  ++A +E VAE++RK +A+ NVV GKDVF+L++KPGFD AFAMGLVL+LDQI+   F 
Sbjct: 135 CTIFDAAKEAVAEIKRKVDATTNVVLGKDVFSLIIKPGFDGAFAMGLVLVLDQINGDSF- 193

Query: 185 LFDDGEDQVQD 217
              D ED   D
Sbjct: 194 ---DDEDTEMD 201


>ref|NP_001236323.1| uncharacterized protein LOC100527456 [Glycine max]
           gi|255632396|gb|ACU16548.1| unknown [Glycine max]
          Length = 219

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/73 (56%), Positives = 52/73 (71%)
 Frame = +2

Query: 2   CCDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEF 181
           CC  +N T+E VAE+RRK + + +VV GK+VF+L VKPGFDAAFAMG VL+LDQI     
Sbjct: 143 CCTVFNVTKESVAEIRRKVDPTTSVVLGKEVFSLCVKPGFDAAFAMGFVLVLDQI----- 197

Query: 182 GLFDDGEDQVQDQ 220
               +GED V D+
Sbjct: 198 ----NGEDYVDDR 206


>ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Vitis vinifera]
           gi|297743462|emb|CBI36329.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
 Frame = +2

Query: 2   CCDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI--DFS 175
           CC  +NA +E VAE+RRK +AS +V+ GKDVFTL +KPGF  AFAMGLVL+LDQI  D+ 
Sbjct: 133 CCTIFNAAKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFGGAFAMGLVLVLDQISDDYE 192

Query: 176 EFGL 187
           + GL
Sbjct: 193 DDGL 196


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