BLASTX nr result
ID: Coptis21_contig00005179
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005179 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera] 88 8e-16 ref|XP_002517637.1| GTP binding protein, putative [Ricinus commu... 84 1e-14 ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like ... 84 2e-14 ref|NP_001236323.1| uncharacterized protein LOC100527456 [Glycin... 83 2e-14 ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Viti... 83 2e-14 >emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera] Length = 207 Score = 87.8 bits (216), Expect = 8e-16 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 2/64 (3%) Frame = +2 Query: 2 CCDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI--DFS 175 CC +NAT+E VAE+RRK +AS +V+ GKDVFTL +KPGFD AFAMGLVL+LDQI D+ Sbjct: 133 CCTIFNATKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFDGAFAMGLVLVLDQISDDYE 192 Query: 176 EFGL 187 + GL Sbjct: 193 DDGL 196 >ref|XP_002517637.1| GTP binding protein, putative [Ricinus communis] gi|223543269|gb|EEF44801.1| GTP binding protein, putative [Ricinus communis] Length = 206 Score = 84.0 bits (206), Expect = 1e-14 Identities = 41/72 (56%), Positives = 53/72 (73%) Frame = +2 Query: 5 CDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEFG 184 C F+NA +E VAE+RRK + S +VV GKDVF+L +KPGFD AFAMGLVL+LDQI Sbjct: 135 CTFFNAVKESVAEIRRKVDTSTHVVLGKDVFSLCLKPGFDGAFAMGLVLVLDQI------ 188 Query: 185 LFDDGEDQVQDQ 220 +G+D V+D+ Sbjct: 189 ---NGDDYVEDE 197 >ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus] gi|449509285|ref|XP_004163545.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus] Length = 206 Score = 83.6 bits (205), Expect = 2e-14 Identities = 40/71 (56%), Positives = 52/71 (73%) Frame = +2 Query: 5 CDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEFG 184 C ++A +E VAE++RK +A+ NVV GKDVF+L++KPGFD AFAMGLVL+LDQI+ F Sbjct: 135 CTIFDAAKEAVAEIKRKVDATTNVVLGKDVFSLIIKPGFDGAFAMGLVLVLDQINGDSF- 193 Query: 185 LFDDGEDQVQD 217 D ED D Sbjct: 194 ---DDEDTEMD 201 >ref|NP_001236323.1| uncharacterized protein LOC100527456 [Glycine max] gi|255632396|gb|ACU16548.1| unknown [Glycine max] Length = 219 Score = 83.2 bits (204), Expect = 2e-14 Identities = 41/73 (56%), Positives = 52/73 (71%) Frame = +2 Query: 2 CCDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQIDFSEF 181 CC +N T+E VAE+RRK + + +VV GK+VF+L VKPGFDAAFAMG VL+LDQI Sbjct: 143 CCTVFNVTKESVAEIRRKVDPTTSVVLGKEVFSLCVKPGFDAAFAMGFVLVLDQI----- 197 Query: 182 GLFDDGEDQVQDQ 220 +GED V D+ Sbjct: 198 ----NGEDYVDDR 206 >ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Vitis vinifera] gi|297743462|emb|CBI36329.3| unnamed protein product [Vitis vinifera] Length = 207 Score = 83.2 bits (204), Expect = 2e-14 Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 2/64 (3%) Frame = +2 Query: 2 CCDFYNATREIVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILDQI--DFS 175 CC +NA +E VAE+RRK +AS +V+ GKDVFTL +KPGF AFAMGLVL+LDQI D+ Sbjct: 133 CCTIFNAAKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFGGAFAMGLVLVLDQISDDYE 192 Query: 176 EFGL 187 + GL Sbjct: 193 DDGL 196