BLASTX nr result
ID: Coptis21_contig00005173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00005173
(1857 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI20740.3| unnamed protein product [Vitis vinifera] 627 e-177
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a... 624 e-176
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl... 561 e-157
ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a... 558 e-156
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h... 555 e-155
>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
Length = 1688
Score = 627 bits (1618), Expect = e-177
Identities = 329/550 (59%), Positives = 399/550 (72%), Gaps = 17/550 (3%)
Frame = -1
Query: 1857 RKLQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQFVTEDPKTVVGKTCDR 1678
R LQGYIRD AF+PRRWV PGQRSI P+PC+CGVD +VPL+ +F TED K VVGK+CDR
Sbjct: 1140 RSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCDR 1199
Query: 1677 GHRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLTLIDKAISNAPLWHH 1498
GHRWM SKTI+DCVE +MKW GI+ E + +L+D+AI+ A L +
Sbjct: 1200 GHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTY 1259
Query: 1497 TPESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLEFLGDSVLDLLITWY 1318
P++N + +LESK+ Y F+ KGLLLEAITHA++QE G+ YCYQRLEFLGDSVLD+LITW+
Sbjct: 1260 IPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWH 1319
Query: 1317 LFQSHTDIDPGELTDLRSASVNNESFAKAAVKHALQQHLQHCSGLLLEQITEYVKFVLDG 1138
L+QSH DIDPGELTDLRSASVNNESFA+ AV+ LQQHLQHCSGLLL QI EY K++
Sbjct: 1320 LYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGS 1379
Query: 1137 HDHP-LLQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLLSPIVTPEKLELPPF 961
D P LQ K PKALGDLVESIAGA+LID++ NL+EVWRIF+PLLSPIVTP+KLELPP
Sbjct: 1380 DDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPL 1439
Query: 960 RELNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRDKSKKAAKGQAAFQLLK 781
RELNELC LGYFI+E T + E+VH EL LQ+ DVLL GEG ++KKAAKGQAA QLLK
Sbjct: 1440 RELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRNKKAAKGQAAAQLLK 1499
Query: 780 DLEVRGISHFRHVS--RKKNHEMVFDDSYIQDMDISICRQSSGKDLNEPSSKKKK----- 622
+LE RGIS+ R S RK+ ++V S + +M C QS+ +D +E KK
Sbjct: 1500 NLEKRGISYSRSNSKRRKQGADLVGVSSSL-NMGGDACGQSNNEDSSELIKFHKKQKTTG 1558
Query: 621 ---------AXXXXXXXXXXXXTAPVVVTINKNKGGPRASLYALCKKQQWPMPTFDSIQQ 469
A PV+ +IN KGGPR+SLY LCK+ QWPMP+F+S +Q
Sbjct: 1559 MQLCTRTSIANNCLENACKPKLDTPVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQ 1618
Query: 468 QSRSPVEFGSGSERRIGFNIFVSKITLHIPNFGAIELTGEQRADKKSSRDSAALILLYEL 289
+SR P+ FG GSERR GFN F+S I+LHIPN G +E G+ RADKKSS DSAAL++L+EL
Sbjct: 1619 RSRFPIIFGEGSERREGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHEL 1678
Query: 288 GRRGKCSIED 259
RRGK I D
Sbjct: 1679 QRRGKLIIHD 1688
>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
Length = 1648
Score = 624 bits (1609), Expect = e-176
Identities = 325/536 (60%), Positives = 395/536 (73%), Gaps = 3/536 (0%)
Frame = -1
Query: 1857 RKLQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQFVTEDPKTVVGKTCDR 1678
R LQGYIRD AF+PRRWV PGQRSI P+PC+CGVD +VPL+ +F TED K VVGK+CDR
Sbjct: 1130 RSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCDR 1189
Query: 1677 GHRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLTLIDKAISNAPLWHH 1498
GHRWM SKTI+DCVE +MKW GI+ E + +L+D+AI+ A L +
Sbjct: 1190 GHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTY 1249
Query: 1497 TPESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLEFLGDSVLDLLITWY 1318
P++N + +LESK+ Y F+ KGLLLEAITHA++QE G+ YCYQRLEFLGDSVLD+LITW+
Sbjct: 1250 IPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWH 1309
Query: 1317 LFQSHTDIDPGELTDLRSASVNNESFAKAAVKHALQQHLQHCSGLLLEQITEYVKFVLDG 1138
L+QSH DIDPGELTDLRSASVNNESFA+ AV+ LQQHLQHCSGLLL QI EY K++
Sbjct: 1310 LYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGS 1369
Query: 1137 HDHP-LLQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLLSPIVTPEKLELPPF 961
D P LQ K PKALGDLVESIAGA+LID++ NL+EVWRIF+PLLSPIVTP+KLELPP
Sbjct: 1370 DDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPL 1429
Query: 960 RELNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRDKSKKAAKGQAAFQLLK 781
RELNELC LGYFI+E T + E+VH EL LQ+ DVLL GEG ++KKAAKGQAA QLLK
Sbjct: 1430 RELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRNKKAAKGQAAAQLLK 1489
Query: 780 DLEVRGISHFRHVS--RKKNHEMVFDDSYIQDMDISICRQSSGKDLNEPSSKKKKAXXXX 607
+LE RGIS+ R S RK+ ++V S + +M C QS+ +D +E
Sbjct: 1490 NLEKRGISYSRSNSKRRKQGADLVGVSSSL-NMGGDACGQSNNEDSSE------------ 1536
Query: 606 XXXXXXXXTAPVVVTINKNKGGPRASLYALCKKQQWPMPTFDSIQQQSRSPVEFGSGSER 427
V+ +IN KGGPR+SLY LCK+ QWPMP+F+S +Q+SR P+ FG GSER
Sbjct: 1537 ----NYDFVFAVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSER 1592
Query: 426 RIGFNIFVSKITLHIPNFGAIELTGEQRADKKSSRDSAALILLYELGRRGKCSIED 259
R GFN F+S I+LHIPN G +E G+ RADKKSS DSAAL++L+EL RRGK I D
Sbjct: 1593 REGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHELQRRGKLIIHD 1648
>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Cucumis sativus]
Length = 1639
Score = 561 bits (1446), Expect = e-157
Identities = 289/532 (54%), Positives = 368/532 (69%), Gaps = 1/532 (0%)
Frame = -1
Query: 1851 LQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQFVTEDPKTVVGKTCDRGH 1672
LQGYIRDSAF+PRRWV PGQ + P+PC CGVDT +VPL +F TEDPK V+GK CD+GH
Sbjct: 1128 LQGYIRDSAFDPRRWVAPGQCTNRPVPCKCGVDTVEVPLHDKFCTEDPKVVLGKCCDKGH 1187
Query: 1671 RWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLTLIDKAISNAPLWHHTP 1492
RW+ SKTI+DC E +MKWLGI+ D+ L+ AI++A L
Sbjct: 1188 RWVVSKTIADCAEALIGAYYVDGGIIAALHVMKWLGIDVNLDVALVVDAITSASLRSCPL 1247
Query: 1491 ESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLEFLGDSVLDLLITWYLF 1312
+ LESK+ Y F KGLLLEA+TH S QE G++YCYQRLEFLGDSVLDLLITW+ +
Sbjct: 1248 GDTEIATLESKIGYDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLLITWHYY 1307
Query: 1311 QSHTDIDPGELTDLRSASVNNESFAKAAVKHALQQHLQHCSGLLLEQITEYVKFVLDGHD 1132
Q+++DIDPGELTDLRSASVNNE+FA+ AV+ LQQHLQHCSGLL+ QITEYVK++ + D
Sbjct: 1308 QNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQITEYVKYLSESQD 1367
Query: 1131 HPL-LQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLLSPIVTPEKLELPPFRE 955
L K PK LGD+VESIAGA+LID++ NLDEVW+I++PLL+P VTP+KLELPP RE
Sbjct: 1368 TGKPLHGNKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRE 1427
Query: 954 LNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRDKSKKAAKGQAAFQLLKDL 775
L ELC LGYFI++ T + E H EL LQL+D LL GEG ++++KAA+G+AA +LL L
Sbjct: 1428 LIELCDSLGYFIKDKCTRKGETFHAELRLQLQDSLLIGEGYERTRKAARGEAAHRLLAQL 1487
Query: 774 EVRGISHFRHVSRKKNHEMVFDDSYIQDMDISICRQSSGKDLNEPSSKKKKAXXXXXXXX 595
E RGIS+ R S+K+ D+S + C D +P+ +
Sbjct: 1488 ETRGISYSRSGSKKRKQNPSHDESAMVLPSSVNC----STDACDPNVE------------ 1531
Query: 594 XXXXTAPVVVTINKNKGGPRASLYALCKKQQWPMPTFDSIQQQSRSPVEFGSGSERRIGF 415
PV+ IN KGGPR++L+ LCKK QWPMPTF++++ +SR +E G G E+R GF
Sbjct: 1532 -----TPVIGPINLKKGGPRSTLFELCKKLQWPMPTFNTVENKSRVQIEIGEGLEKRKGF 1586
Query: 414 NIFVSKITLHIPNFGAIELTGEQRADKKSSRDSAALILLYELGRRGKCSIED 259
N F+S ITL IPN G +E GE RADKKSS DSA+L++L EL ++G+ I D
Sbjct: 1587 NSFLSNITLQIPNAGYVECEGEARADKKSSFDSASLVMLQELQQQGRVIIND 1638
>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 1671
Score = 558 bits (1439), Expect = e-156
Identities = 297/538 (55%), Positives = 376/538 (69%), Gaps = 4/538 (0%)
Frame = -1
Query: 1857 RKLQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQFVTEDPKTVVGKTCDR 1678
RKLQGYIRDSAFEPRRWV PGQRSI + C+CG++T +VPL+++F TEDPK VVGK CDR
Sbjct: 1143 RKLQGYIRDSAFEPRRWVAPGQRSIHLVCCDCGLETLEVPLDAKFHTEDPKVVVGKFCDR 1202
Query: 1677 GHRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLTLIDKAISNAPLWHH 1498
GH WMCSKTI+DCVE +MKWLGI AE +L+L+D+AI+ A L
Sbjct: 1203 GHCWMCSKTIADCVEALIGAYYVDGGLFASLNVMKWLGIGAELELSLVDEAITAASLRTC 1262
Query: 1497 TPESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLEFLGDSVLDLLITWY 1318
P+ + + LE K+ Y F+ KGLLLEAITH S++E G+ CY+RLEFLGDSVLDLLITW+
Sbjct: 1263 LPKESEIASLEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYERLEFLGDSVLDLLITWH 1322
Query: 1317 LFQSHTDIDPGELTDLRSASVNNESFAKAAVKHALQQHLQHCSGLLLEQITEYVKFVLDG 1138
L+QSHTDIDPG LTDLRSASVNN++FA+ AV+H L QHL H SGLLL QI+EYVK V+
Sbjct: 1323 LYQSHTDIDPGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLLSQISEYVK-VISE 1381
Query: 1137 HDHPLLQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLLSPIVTPEKLELPPFR 958
D L + PKALGD+VESI GA+LID++ +LD+VW +F LLSPIVTP+KLELPPFR
Sbjct: 1382 SDPRSLPSISAPKALGDVVESIVGAILIDTKLSLDQVWNVFYSLLSPIVTPDKLELPPFR 1441
Query: 957 ELNELCSHLGYFIRETSTIEE--EIVHIELWLQLKDVLLKGEGRDKSKKAAKGQAAFQLL 784
ELNELC LGYF++ E+ +H+E+ +QL + LL EG+ +KK AKG+AAF LL
Sbjct: 1442 ELNELCDSLGYFVKVKENCEKVGSAMHVEVSVQLPNALLVREGKGANKKTAKGEAAFYLL 1501
Query: 783 KDLEVRGISH--FRHVSRKKNHEMVFDDSYIQDMDISICRQSSGKDLNEPSSKKKKAXXX 610
KDLE +GISH F ++ N + V+ S+++ MD SI + +EP+S K+
Sbjct: 1502 KDLEKQGISHGSFMSKGKRDNPDHVYGSSHLK-MDSSILIEEHS---SEPASHKR----- 1552
Query: 609 XXXXXXXXXTAPVVVTINKNKGGPRASLYALCKKQQWPMPTFDSIQQQSRSPVEFGSGSE 430
+ ++IN KGGPR +LY +CKK QWP+PTFDS + + RS E G +
Sbjct: 1553 --HILDETNLTAINLSINMKKGGPRTTLYEVCKKLQWPVPTFDSTEYKDRSLFESCEGLQ 1610
Query: 429 RRIGFNIFVSKITLHIPNFGAIELTGEQRADKKSSRDSAALILLYELGRRGKCSIEDL 256
G N FVSKITL IPN+G IE GE R+DKK+S DSAA+ +L EL R GK I+ L
Sbjct: 1611 GSKGQNCFVSKITLCIPNYGNIESKGEARSDKKTSFDSAAVQMLLELQRLGKVEIDPL 1668
>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
Length = 1655
Score = 555 bits (1430), Expect = e-155
Identities = 292/535 (54%), Positives = 368/535 (68%), Gaps = 3/535 (0%)
Frame = -1
Query: 1854 KLQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQFVTEDPKTVVGKTCDRG 1675
K+QGYIRDSAF+PRRWV PGQR + P+PC CGVD+ +VPL+ +F TEDPK VGK+CDRG
Sbjct: 1136 KIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRG 1195
Query: 1674 HRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLTLIDKAISNAPLWHHT 1495
HRW+CSKTISDCVE +MKWLGI+AE D ++ + I+ A L +
Sbjct: 1196 HRWLCSKTISDCVEALIGAYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTYV 1255
Query: 1494 PESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLEFLGDSVLDLLITWYL 1315
P + +++ESK+ Y F+ K L EA+TH S E SYCYQRLEFLGDSVLDLLIT YL
Sbjct: 1256 PNYEI-HMIESKVGYNFSVKFFLQEALTHESLHE---SYCYQRLEFLGDSVLDLLITQYL 1311
Query: 1314 FQSHTDIDPGELTDLRSASVNNESFAKAAVKHALQQHLQHCSGLLLEQITEYVKFVLDGH 1135
+ HT+IDPGELTDLRSASVNNE+FA+ AV+H L +HLQHCS LL QI+EYV+ +
Sbjct: 1312 YNHHTNIDPGELTDLRSASVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVQSFTESD 1371
Query: 1134 DHPLLQ-RVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLLSPIVTPEKLELPPFR 958
+ L +K PKALGDLVESI GA+LID+ NLD+VWRI EPLLSPIVTP+KLELPPFR
Sbjct: 1372 NTTRLDPSIKGPKALGDLVESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFR 1431
Query: 957 ELNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRDKSKKAAKGQAAFQLLKD 778
ELNELC LGYFI+E + E+VH EL LQL LL GEG D+S+K AKG+AA LLKD
Sbjct: 1432 ELNELCDSLGYFIKEKCKNKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKGKAASCLLKD 1491
Query: 777 LEVRGISHFRHVSRKKNHEMVFDDSYIQD--MDISICRQSSGKDLNEPSSKKKKAXXXXX 604
LE RGIS +K+ H+ V ++D ++ +I ++ ++ KK
Sbjct: 1492 LENRGISR-----KKRKHDCVDSSQTMEDDSLEPTIPKRQRRAEIQLLDESKKAC----- 1541
Query: 603 XXXXXXXTAPVVVTINKNKGGPRASLYALCKKQQWPMPTFDSIQQQSRSPVEFGSGSERR 424
PV+VT+ KGGPR +L+ LCKK WPMP+ + + +S +P+E G G ER+
Sbjct: 1542 ---SATPATPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEGPERK 1598
Query: 423 IGFNIFVSKITLHIPNFGAIELTGEQRADKKSSRDSAALILLYELGRRGKCSIED 259
GF FVSKI L++P + IE TG+ +ADKKSS DSAAL +LYEL +RGK IE+
Sbjct: 1599 KGFISFVSKIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1653