BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005160
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143268.1| PREDICTED: cell division cycle protein 48 ho...   205   3e-51
ref|XP_004137832.1| PREDICTED: cell division cycle protein 48 ho...   205   3e-51
ref|NP_187595.1| cell division control protein 48-A [Arabidopsis...   205   3e-51
ref|NP_190891.1| cell division control protein 48-D [Arabidopsis...   205   3e-51
ref|NP_001235099.1| cell division cycle protein 48 homolog [Glyc...   205   3e-51

>ref|XP_004143268.1| PREDICTED: cell division cycle protein 48 homolog [Cucumis sativus]
          Length = 807

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +3

Query: 3   MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 182
           MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP
Sbjct: 217 MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 276

Query: 183 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 311
           EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK
Sbjct: 277 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319



 Score =  114 bits (286), Expect = 6e-24
 Identities = 48/99 (48%), Positives = 75/99 (75%)
 Frame = +3

Query: 9   QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 188
           +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GKTL+A+A+ANE  A F  + GPE+
Sbjct: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551

Query: 189 MSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 305
           ++   GESE+N+R+ F++A ++AP ++F DE+DSIA +R
Sbjct: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 590


>ref|XP_004137832.1| PREDICTED: cell division cycle protein 48 homolog [Cucumis sativus]
           gi|449525650|ref|XP_004169829.1| PREDICTED: cell
           division cycle protein 48 homolog [Cucumis sativus]
          Length = 804

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +3

Query: 3   MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 182
           MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP
Sbjct: 217 MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 276

Query: 183 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 311
           EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK
Sbjct: 277 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319



 Score =  114 bits (286), Expect = 6e-24
 Identities = 48/99 (48%), Positives = 75/99 (75%)
 Frame = +3

Query: 9   QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 188
           +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GKTL+A+A+ANE  A F  + GPE+
Sbjct: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551

Query: 189 MSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 305
           ++   GESE+N+R+ F++A ++AP ++F DE+DSIA +R
Sbjct: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 590


>ref|NP_187595.1| cell division control protein 48-A [Arabidopsis thaliana]
           gi|1705677|sp|P54609.1|CD48A_ARATH RecName: Full=Cell
           division control protein 48 homolog A; Short=AtCDC48a
           gi|6681343|gb|AAF23260.1|AC015985_18 putative
           transitional endoplasmic reticulum ATPase [Arabidopsis
           thaliana] gi|1019904|gb|AAC49120.1| cell division cycle
           protein [Arabidopsis thaliana]
           gi|17473551|gb|AAL38252.1| putative transitional
           endoplasmic reticulum ATPase [Arabidopsis thaliana]
           gi|20453130|gb|AAM19807.1| AT3g09840/F8A24_11
           [Arabidopsis thaliana] gi|110735114|gb|ABG89127.1|
           CDC48a [synthetic construct]
           gi|222424942|dbj|BAH20422.1| AT3G09840 [Arabidopsis
           thaliana] gi|332641299|gb|AEE74820.1| cell division
           control protein 48-A [Arabidopsis thaliana]
          Length = 809

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +3

Query: 3   MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 182
           MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP
Sbjct: 216 MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 275

Query: 183 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 311
           EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK
Sbjct: 276 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 318



 Score =  114 bits (286), Expect = 6e-24
 Identities = 48/99 (48%), Positives = 75/99 (75%)
 Frame = +3

Query: 9   QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 188
           +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GKTL+A+A+ANE  A F  + GPE+
Sbjct: 491 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 550

Query: 189 MSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 305
           ++   GESE+N+R+ F++A ++AP ++F DE+DSIA +R
Sbjct: 551 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 589


>ref|NP_190891.1| cell division control protein 48-D [Arabidopsis thaliana]
           gi|28201772|sp|Q9SCN8.1|CD48D_ARATH RecName: Full=Cell
           division control protein 48 homolog D; Short=AtCDC48d;
           AltName: Full=Transitional endoplasmic reticulum ATPase
           D gi|6630743|emb|CAB64226.1| CDC48-like protein
           [Arabidopsis thaliana] gi|110737510|dbj|BAF00697.1|
           CDC48 - like protein [Arabidopsis thaliana]
           gi|332645529|gb|AEE79050.1| cell division control
           protein 48-D [Arabidopsis thaliana]
          Length = 815

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +3

Query: 3   MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 182
           MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP
Sbjct: 217 MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 276

Query: 183 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 311
           EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK
Sbjct: 277 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319



 Score =  115 bits (287), Expect = 5e-24
 Identities = 49/99 (49%), Positives = 75/99 (75%)
 Frame = +3

Query: 9   QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 188
           +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GKTL+A+A+ANE  A F  I GPE+
Sbjct: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 551

Query: 189 MSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 305
           ++   GESE+N+R+ F++A ++AP ++F DE+DSIA +R
Sbjct: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 590


>ref|NP_001235099.1| cell division cycle protein 48 homolog [Glycine max]
           gi|1705678|sp|P54774.1|CDC48_SOYBN RecName: Full=Cell
           division cycle protein 48 homolog; AltName:
           Full=Valosin-containing protein homolog; Short=VCP
           gi|862480|gb|AAA80587.1| valosin-containing protein
           [Glycine max] gi|86212372|gb|ABC87759.1| plamsma
           membrane-associated AAA-ATPase [Glycine max]
          Length = 807

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +3

Query: 3   MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 182
           MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP
Sbjct: 217 MAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP 276

Query: 183 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 311
           EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK
Sbjct: 277 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319



 Score =  114 bits (286), Expect = 6e-24
 Identities = 48/99 (48%), Positives = 75/99 (75%)
 Frame = +3

Query: 9   QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 188
           +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GKTL+A+A+ANE  A F  + GPE+
Sbjct: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551

Query: 189 MSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 305
           ++   GESE+N+R+ F++A ++AP ++F DE+DSIA +R
Sbjct: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 590