BLASTX nr result

ID: Coptis21_contig00005156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005156
         (1509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283821.1| PREDICTED: uncharacterized protein LOC100256...   106   1e-20
ref|XP_004150567.1| PREDICTED: guanine nucleotide-binding protei...   103   1e-19
ref|XP_002517046.1| conserved hypothetical protein [Ricinus comm...   101   5e-19
ref|XP_002321907.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-18
ref|XP_003590556.1| hypothetical protein MTR_1g071100 [Medicago ...    98   7e-18

>ref|XP_002283821.1| PREDICTED: uncharacterized protein LOC100256197 [Vitis vinifera]
            gi|297737134|emb|CBI26335.3| unnamed protein product
            [Vitis vinifera]
          Length = 105

 Score =  106 bits (265), Expect = 1e-20
 Identities = 51/81 (62%), Positives = 55/81 (67%)
 Frame = -2

Query: 1127 RGKHRILAELKRXXXXXXXXXXXXXXXXXXEKVSAACQQLLLNVESKPDPLLPVTTGPTN 948
            RGKHRI AELKR                  E+ S AC++LL  VES+PDPLLPVT GP N
Sbjct: 25   RGKHRITAELKRLEQEARFLEEELEQLEKTERASDACRELLSIVESRPDPLLPVTYGPAN 84

Query: 947  PSWDRWFEGPQDSQGCRCWIL 885
            P WDRWFEGPQDSQGCRCWIL
Sbjct: 85   PIWDRWFEGPQDSQGCRCWIL 105


>ref|XP_004150567.1| PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like
            [Cucumis sativus] gi|449520986|ref|XP_004167513.1|
            PREDICTED: guanine nucleotide-binding protein subunit
            gamma 2-like [Cucumis sativus]
          Length = 104

 Score =  103 bits (257), Expect = 1e-19
 Identities = 46/81 (56%), Positives = 55/81 (67%)
 Frame = -2

Query: 1127 RGKHRILAELKRXXXXXXXXXXXXXXXXXXEKVSAACQQLLLNVESKPDPLLPVTTGPTN 948
            RGKHRI AE+KR                  +K S  C+++L NVE++PDPLLP+T GP N
Sbjct: 24   RGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKEMLSNVETRPDPLLPLTHGPIN 83

Query: 947  PSWDRWFEGPQDSQGCRCWIL 885
            P WDRWFEGPQDS+GCRCWIL
Sbjct: 84   PLWDRWFEGPQDSKGCRCWIL 104


>ref|XP_002517046.1| conserved hypothetical protein [Ricinus communis]
            gi|223543681|gb|EEF45209.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 106

 Score =  101 bits (252), Expect = 5e-19
 Identities = 46/81 (56%), Positives = 55/81 (67%)
 Frame = -2

Query: 1127 RGKHRILAELKRXXXXXXXXXXXXXXXXXXEKVSAACQQLLLNVESKPDPLLPVTTGPTN 948
            RGKHRI AE+KR                  EK SAAC+++L NV+ +PDPLLP+T G  N
Sbjct: 26   RGKHRIQAEVKRLEQETRFLEQELEQLDKMEKASAACKEMLSNVDIRPDPLLPITKGLLN 85

Query: 947  PSWDRWFEGPQDSQGCRCWIL 885
            P WDRWFEGPQ+SQGCRCW+L
Sbjct: 86   PLWDRWFEGPQESQGCRCWVL 106


>ref|XP_002321907.1| predicted protein [Populus trichocarpa] gi|222868903|gb|EEF06034.1|
            predicted protein [Populus trichocarpa]
          Length = 109

 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 45/80 (56%), Positives = 53/80 (66%)
 Frame = -2

Query: 1127 RGKHRILAELKRXXXXXXXXXXXXXXXXXXEKVSAACQQLLLNVESKPDPLLPVTTGPTN 948
            RGKHRI AELKR                  EK S AC+++L NVE+ PDPLLP+T GP N
Sbjct: 29   RGKHRIQAELKRIEQEARFLEEELEQLDKLEKASTACKEMLNNVETIPDPLLPITNGPMN 88

Query: 947  PSWDRWFEGPQDSQGCRCWI 888
            P WDRWFEGP++S+GC CWI
Sbjct: 89   PLWDRWFEGPRESKGCSCWI 108


>ref|XP_003590556.1| hypothetical protein MTR_1g071100 [Medicago truncatula]
            gi|355479604|gb|AES60807.1| hypothetical protein
            MTR_1g071100 [Medicago truncatula]
          Length = 109

 Score = 97.8 bits (242), Expect = 7e-18
 Identities = 46/81 (56%), Positives = 52/81 (64%)
 Frame = -2

Query: 1127 RGKHRILAELKRXXXXXXXXXXXXXXXXXXEKVSAACQQLLLNVESKPDPLLPVTTGPTN 948
            RGKHRILAELKR                  E VSA C++LL N++S+PDPL+P   GP N
Sbjct: 29   RGKHRILAELKRLQQDTKFLQEELDELEKTENVSAICKELLQNMDSRPDPLIPEVHGPVN 88

Query: 947  PSWDRWFEGPQDSQGCRCWIL 885
              WDRWFEGPQD Q CRCWIL
Sbjct: 89   LLWDRWFEGPQDPQACRCWIL 109


Top