BLASTX nr result
ID: Coptis21_contig00005151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00005151
(1354 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22113.3| unnamed protein product [Vitis vinifera] 530 e-148
ref|XP_002279618.2| PREDICTED: cyclin-L1-1 [Vitis vinifera] 523 e-146
ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus... 518 e-144
ref|XP_003536100.1| PREDICTED: cyclin-L1-1-like [Glycine max] 516 e-144
ref|XP_003611078.1| Cyclin-L1-1 [Medicago truncatula] gi|3555124... 511 e-142
>emb|CBI22113.3| unnamed protein product [Vitis vinifera]
Length = 455
Score = 530 bits (1364), Expect = e-148
Identities = 287/467 (61%), Positives = 324/467 (69%), Gaps = 26/467 (5%)
Frame = -3
Query: 1325 MIY---DTFYLTEEQLKNSPSRKDGIDEATETTLRIYGSDLIQESGILLKQPQAVMATGQ 1155
MIY DTFYLT+EQLKNSPSRKDGIDEATE TLRIYG DLIQESGILL+ PQ VMATGQ
Sbjct: 1 MIYTAIDTFYLTDEQLKNSPSRKDGIDEATEMTLRIYGCDLIQESGILLRLPQVVMATGQ 60
Query: 1154 VLFHRFYCKKSFARFSVKRVAASCVWLASKLEESPKKARHVILVFNRMECRRENLPIEHF 975
VLFHRFYCKKSFARF+VKRVAASCVWLASKLEES +KAR V++VF+RMECRRENLP+ H
Sbjct: 61 VLFHRFYCKKSFARFNVKRVAASCVWLASKLEESLRKARQVLIVFHRMECRRENLPVVHL 120
Query: 974 DNSSKKYAYLKQDLIKTERHLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLAN 795
D SKKYA LK L +TERH+LKEMGFICHVEHPHKFISNYLATL+TPPELRQEAWNLAN
Sbjct: 121 DPFSKKYAELKTHLSRTERHILKEMGFICHVEHPHKFISNYLATLKTPPELRQEAWNLAN 180
Query: 794 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 615
DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPEN PWW+ FDA+KS IDEVCRVLAHLY
Sbjct: 181 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENEPWWEVFDAEKSAIDEVCRVLAHLY 240
Query: 614 SLPKAQYVPVCQEGDSFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNGE 435
+LPKAQY+PVC++GDSFT +G
Sbjct: 241 NLPKAQYIPVCKDGDSFTSSNKSQDSQTQPVSKEVLQ--------------------SGP 280
Query: 434 AVPNDKLDP-----------DGSKDLKVKFALEKLKESKQSDDDTKSVPIDGEAREDPVL 288
+ ND + P GSK+ VK AL+ LKESK+ DDD KS+ ++GE RE+P+
Sbjct: 281 SANNDTVTPKAASALINPESGGSKNSMVKQALDMLKESKKGDDDPKSMAVEGEGREEPI- 339
Query: 287 KSKADHKTEATG----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 138
SK++H+TEA+G
Sbjct: 340 PSKSEHRTEASGERNKERDKERERERERDRDRDRERERAKARDRDRGRDSDRERERDEID 399
Query: 137 XXXDKLKERSRRSKDKGKDSGGHSEKSRHHSSRDRGEYY--GYSSRE 3
+K+K+R RSKDKGKDSGGHSEKSRHHSSRDR +Y+ YSSRE
Sbjct: 400 KDREKVKDRKHRSKDKGKDSGGHSEKSRHHSSRDR-DYHSSSYSSRE 445
>ref|XP_002279618.2| PREDICTED: cyclin-L1-1 [Vitis vinifera]
Length = 451
Score = 523 bits (1346), Expect = e-146
Identities = 286/467 (61%), Positives = 323/467 (69%), Gaps = 26/467 (5%)
Frame = -3
Query: 1325 MIY---DTFYLTEEQLKNSPSRKDGIDEATETTLRIYGSDLIQESGILLKQPQAVMATGQ 1155
MIY DTFYLT+EQLKNSPSRKDGIDEATE TLRIYG DLIQESGILL+ PQ VMATGQ
Sbjct: 1 MIYTAIDTFYLTDEQLKNSPSRKDGIDEATEMTLRIYGCDLIQESGILLRLPQVVMATGQ 60
Query: 1154 VLFHRFYCKKSFARFSVKRVAASCVWLASKLEESPKKARHVILVFNRMECRRENLPIEHF 975
VLFHRFYCKKSFARF+VKRVAASCVWLASKLEES +KAR V++VF+RMECRRENLP+ H
Sbjct: 61 VLFHRFYCKKSFARFNVKRVAASCVWLASKLEESLRKARQVLIVFHRMECRRENLPVVHL 120
Query: 974 DNSSKKYAYLKQDLIKTERHLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLAN 795
D SKKYA LK L +TERH+LKEMGFICHVEHPHKFISNYLATL+TPPELRQEAWNLAN
Sbjct: 121 DPFSKKYAELKTHLSRTERHILKEMGFICHVEHPHKFISNYLATLKTPPELRQEAWNLAN 180
Query: 794 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 615
DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPEN PWW+ FDA+KS IDEVCRVLAHLY
Sbjct: 181 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENEPWWEVFDAEKSAIDEVCRVLAHLY 240
Query: 614 SLPKAQYVPVCQEGDSFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNGE 435
+LPKAQY+PVC++GDSFT +G
Sbjct: 241 NLPKAQYIPVCKDGDSFTSSNKSQDSQTQPEVLQ-----------------------SGP 277
Query: 434 AVPNDKLDP-----------DGSKDLKVKFALEKLKESKQSDDDTKSVPIDGEAREDPVL 288
+ ND + P GSK+ VK AL+ LKESK+ DDD KS+ ++GE RE+P+
Sbjct: 278 SANNDTVTPKAASALINPESGGSKNSMVKQALDMLKESKKGDDDPKSMAVEGEGREEPI- 336
Query: 287 KSKADHKTEATG----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 138
SK++H+TEA+G
Sbjct: 337 PSKSEHRTEASGERNKERDKERERERERDRDRDRERERAKARDRDRGRDSDRERERDEID 396
Query: 137 XXXDKLKERSRRSKDKGKDSGGHSEKSRHHSSRDRGEYY--GYSSRE 3
+K+K+R RSKDKGKDS GHSEKSRHHSSRDR +Y+ YSSRE
Sbjct: 397 KDREKVKDRKHRSKDKGKDS-GHSEKSRHHSSRDR-DYHSSSYSSRE 441
>ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus]
gi|449485709|ref|XP_004157252.1| PREDICTED:
cyclin-L1-1-like [Cucumis sativus]
Length = 443
Score = 518 bits (1335), Expect = e-144
Identities = 278/447 (62%), Positives = 316/447 (70%), Gaps = 6/447 (1%)
Frame = -3
Query: 1325 MIY---DTFYLTEEQLKNSPSRKDGIDEATETTLRIYGSDLIQESGILLKQPQAVMATGQ 1155
MIY DTFYLT+EQLKNSPSRKDGIDE TETTLRIYG DLIQE+GILLK PQAVMATGQ
Sbjct: 1 MIYTAIDTFYLTDEQLKNSPSRKDGIDETTETTLRIYGCDLIQEAGILLKLPQAVMATGQ 60
Query: 1154 VLFHRFYCKKSFARFSVKRVAASCVWLASKLEESPKKARHVILVFNRMECRRENLPIEHF 975
VLFHRFYCKKSFARF+VK+VA+SCVWLASKLEE+P+KAR VI+VF+RMECRRENL IE
Sbjct: 61 VLFHRFYCKKSFARFNVKKVASSCVWLASKLEENPRKARQVIIVFHRMECRRENLSIEFL 120
Query: 974 DNSSKKYAYLKQDLIKTERHLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLAN 795
D S KKYA LK +L +TERH+LKEMGFICHVEHPHKFISNYLATL TPPELRQEAWNLAN
Sbjct: 121 DPSLKKYADLKIELSRTERHILKEMGFICHVEHPHKFISNYLATLGTPPELRQEAWNLAN 180
Query: 794 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 615
DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFD +KSGIDEVCRVLAHLY
Sbjct: 181 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDGEKSGIDEVCRVLAHLY 240
Query: 614 SLPKAQYVPVCQEGDSFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNGE 435
+LPKAQY+PVC++GDSFT +
Sbjct: 241 TLPKAQYIPVCKDGDSFTFSNKSWDSQSLPVAKEVPQSSPTANDDPSIV----------K 290
Query: 434 AVPNDKLDPDGSKDLKVKFALEKLKESKQSDDDTKSVPIDGEAREDPVLKSKADHKTE-A 258
A L+ SKD +K AL KLKESK+SDD++KS+ + RE+ V +SK+D + +
Sbjct: 291 ATSGTNLESGVSKDEMLKLALNKLKESKKSDDESKSLMPEATTREELVPRSKSDRRADIG 350
Query: 257 TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKERSRRSKDKGKDS 78
+K+K+R+ RSKD+GK+
Sbjct: 351 ERNKERERERDRERERERDRTKSRDRDRGRDSDRERERDDADREKIKDRAHRSKDRGKEL 410
Query: 77 GGHSEKSRHHSSRDRGEYY--GYSSRE 3
GGH EKSRHHSSRDR EY+ YSSR+
Sbjct: 411 GGHLEKSRHHSSRDR-EYHSSSYSSRD 436
>ref|XP_003536100.1| PREDICTED: cyclin-L1-1-like [Glycine max]
Length = 448
Score = 516 bits (1328), Expect = e-144
Identities = 279/452 (61%), Positives = 317/452 (70%), Gaps = 11/452 (2%)
Frame = -3
Query: 1325 MIY---DTFYLTEEQLKNSPSRKDGIDEATETTLRIYGSDLIQESGILLKQPQAVMATGQ 1155
MIY DTFYLT+EQL SPSRKDGIDEATET+LRIYG DLIQESGILL+ PQAVMATGQ
Sbjct: 1 MIYTAIDTFYLTDEQLAISPSRKDGIDEATETSLRIYGCDLIQESGILLRLPQAVMATGQ 60
Query: 1154 VLFHRFYCKKSFARFSVKRVAASCVWLASKLEESPKKARHVILVFNRMECRRENLPIEHF 975
VLFHRFYCKKSFARF+VK+VAASCVWLASKLEE+P+KAR VI+VF+RMECRRE+ P+EH
Sbjct: 61 VLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPRKARQVIIVFHRMECRREDFPMEHL 120
Query: 974 DNSSKKYAYLKQDLIKTERHLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLAN 795
D SKKY LK +L +TERH+LKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLAN
Sbjct: 121 DLYSKKYVDLKMELSRTERHILKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLAN 180
Query: 794 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 615
DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFD +KSGIDEVCRVLAHLY
Sbjct: 181 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDGEKSGIDEVCRVLAHLY 240
Query: 614 SLPKAQYVPVCQEGDSFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNGE 435
SLPKAQY+PVC++GD FT GE
Sbjct: 241 SLPKAQYIPVCKDGD-FT-----FSNKSSESKSQSTPKDVPQNSPPADTDNSVPKGTQGE 294
Query: 434 AVPNDKLDPDGSKDLKVKFALEKLKESKQSDDDTKSVPIDGEAREDPVLKSKADHKTEA- 258
A ++ +GSK VK A++KLK+SK+SDD++K + +GEAR++P+LKSKAD K EA
Sbjct: 295 A----NIESNGSKGAIVKVAIDKLKDSKRSDDESKGMSTEGEARDEPILKSKADRKIEAI 350
Query: 257 ------TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKERSRRSK 96
KLK+R RS+
Sbjct: 351 ERRADRDRDRERYRDRERDRDRDRDRTKSRDRDRGRDSDKEREREEAERGKLKDRDHRSR 410
Query: 95 DKGKDSGGHSEKSRHHSSRDRGEY-YGYSSRE 3
++ KDS GHSEKS+ HSS DR + YSSRE
Sbjct: 411 ERAKDS-GHSEKSKRHSSHDRDSHGSSYSSRE 441
>ref|XP_003611078.1| Cyclin-L1-1 [Medicago truncatula] gi|355512413|gb|AES94036.1|
Cyclin-L1-1 [Medicago truncatula]
Length = 438
Score = 511 bits (1317), Expect = e-142
Identities = 273/447 (61%), Positives = 316/447 (70%), Gaps = 6/447 (1%)
Frame = -3
Query: 1325 MIY---DTFYLTEEQLKNSPSRKDGIDEATETTLRIYGSDLIQESGILLKQPQAVMATGQ 1155
MIY DTFYLT+EQL NSPSRKDGIDEATETTLRIYG DLIQESGILL+ PQAVMATGQ
Sbjct: 1 MIYTAIDTFYLTDEQLTNSPSRKDGIDEATETTLRIYGCDLIQESGILLRLPQAVMATGQ 60
Query: 1154 VLFHRFYCKKSFARFSVKRVAASCVWLASKLEESPKKARHVILVFNRMECRRENLPIEHF 975
VLFHRFYCKKSFARF+VK+VAASCVWLASKLEE+ +KAR V+++F+RMECRRENLPI+H
Sbjct: 61 VLFHRFYCKKSFARFNVKKVAASCVWLASKLEENTRKARQVLIIFHRMECRRENLPIDHL 120
Query: 974 DNSSKKYAYLKQDLIKTERHLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLAN 795
D SKKY LK +L +TERH+LKEMGFICHVEHPHKFISNYLATLETPPEL QEAWNLAN
Sbjct: 121 DLYSKKYVDLKTELSRTERHILKEMGFICHVEHPHKFISNYLATLETPPELSQEAWNLAN 180
Query: 794 DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 615
DSLRTTLCVRFKSEVVACGVVYAAARRF+VPLPENPPWWKAFDA+KSGIDEVCRVLAHLY
Sbjct: 181 DSLRTTLCVRFKSEVVACGVVYAAARRFEVPLPENPPWWKAFDAEKSGIDEVCRVLAHLY 240
Query: 614 SLPKAQYVPVCQEGDSFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNGE 435
SLPKAQY+P+C+E DSFT +GE
Sbjct: 241 SLPKAQYLPICKEWDSFT-----FSNISLESKSQSTAKDAPQSSSPMNAETSALKGAHGE 295
Query: 434 AVPNDKLDPDGSKDLKVKFALEKLKESKQSDDDTKSVPIDGEAREDPVLKSKADHKTEAT 255
A +D GSK VK A +KL ++++SDDD+K + + + +++P LKSK D K +A+
Sbjct: 296 A----NIDSTGSKGALVKQASDKLNDARKSDDDSKGMAAERDVKDEPTLKSKPDRKMDAS 351
Query: 254 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKERSRRSKDKGKDSG 75
G +LK+R RS+++ KDS
Sbjct: 352 G------ELHRDRDRERDRLKSRDRDRGRDSDKERERDEAERVRLKDRGHRSRERAKDS- 404
Query: 74 GHSEKSRHHSSRDRG-EYY--GYSSRE 3
GHS+KS+ HSS DR +YY YSSRE
Sbjct: 405 GHSDKSKRHSSHDRDRDYYSSSYSSRE 431