BLASTX nr result
ID: Coptis21_contig00005143
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005143 (362 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl... 197 7e-49 emb|CBI23087.3| unnamed protein product [Vitis vinifera] 197 7e-49 ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch... 197 1e-48 ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|2... 196 2e-48 gb|ABK96666.1| unknown [Populus trichocarpa x Populus deltoides] 194 6e-48 >ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis vinifera] Length = 298 Score = 197 bits (501), Expect = 7e-49 Identities = 97/116 (83%), Positives = 110/116 (94%), Gaps = 1/116 (0%) Frame = -1 Query: 362 IQGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFT 186 +QGK+L L+DTV+ +VE+KVGKAVQKH+HLVREVDVRLS+RG +L KGPK+RRCEVTLFT Sbjct: 82 LQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFT 141 Query: 185 KKHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPE 18 KKHGVVRAEE E+LYGSID+VSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVR+PE Sbjct: 142 KKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPE 197 >emb|CBI23087.3| unnamed protein product [Vitis vinifera] Length = 230 Score = 197 bits (501), Expect = 7e-49 Identities = 97/116 (83%), Positives = 110/116 (94%), Gaps = 1/116 (0%) Frame = -1 Query: 362 IQGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFT 186 +QGK+L L+DTV+ +VE+KVGKAVQKH+HLVREVDVRLS+RG +L KGPK+RRCEVTLFT Sbjct: 14 LQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFT 73 Query: 185 KKHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPE 18 KKHGVVRAEE E+LYGSID+VSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVR+PE Sbjct: 74 KKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPE 129 >ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative [Ricinus communis] gi|223536311|gb|EEF37962.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative [Ricinus communis] Length = 311 Score = 197 bits (500), Expect = 1e-48 Identities = 101/120 (84%), Positives = 110/120 (91%), Gaps = 1/120 (0%) Frame = -1 Query: 359 QGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFTK 183 QGK+L L+DTVKK+VEDKVGKAVQKH+HLVREVDVRLSVRG + KGPK+RRCEVTLFTK Sbjct: 93 QGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTK 152 Query: 182 KHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPENVVEP 3 KHGV+RAEED E++Y SIDLVSSIIQRKLRKIKEK SDHGRHMKGFNRLKVREP V EP Sbjct: 153 KHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREP--VAEP 210 >ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|222858512|gb|EEE96059.1| predicted protein [Populus trichocarpa] Length = 306 Score = 196 bits (497), Expect = 2e-48 Identities = 97/115 (84%), Positives = 109/115 (94%), Gaps = 1/115 (0%) Frame = -1 Query: 362 IQGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFT 186 IQGK+L L+DTVK++VEDKVGKAVQKH+HLVREVDVRLSVRG +L KGP++RRCEVTLFT Sbjct: 90 IQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGELGKGPRIRRCEVTLFT 149 Query: 185 KKHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREP 21 +HGVVRAEED E++Y SIDLVSSIIQRKLRKIKEK+SDHGRHMKGFNRLKVREP Sbjct: 150 NRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREP 204 >gb|ABK96666.1| unknown [Populus trichocarpa x Populus deltoides] Length = 268 Score = 194 bits (493), Expect = 6e-48 Identities = 98/119 (82%), Positives = 109/119 (91%), Gaps = 1/119 (0%) Frame = -1 Query: 362 IQGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFT 186 IQGKHL LSDTVKK+VEDKVGKAVQK +HLVR VDVRLSVRG +L KGP++RRCEVTLFT Sbjct: 89 IQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELGKGPRIRRCEVTLFT 148 Query: 185 KKHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPENVV 9 K+HGVVRAEED E++Y SIDL SSIIQRKLRKIK+K+SDHGRHMKGFNRLKVREP + V Sbjct: 149 KRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQV 207