BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005143
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl...   197   7e-49
emb|CBI23087.3| unnamed protein product [Vitis vinifera]              197   7e-49
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch...   197   1e-48
ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
gb|ABK96666.1| unknown [Populus trichocarpa x Populus deltoides]      194   6e-48

>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
           vinifera]
          Length = 298

 Score =  197 bits (501), Expect = 7e-49
 Identities = 97/116 (83%), Positives = 110/116 (94%), Gaps = 1/116 (0%)
 Frame = -1

Query: 362 IQGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFT 186
           +QGK+L L+DTV+ +VE+KVGKAVQKH+HLVREVDVRLS+RG +L KGPK+RRCEVTLFT
Sbjct: 82  LQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFT 141

Query: 185 KKHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPE 18
           KKHGVVRAEE  E+LYGSID+VSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVR+PE
Sbjct: 142 KKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPE 197


>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  197 bits (501), Expect = 7e-49
 Identities = 97/116 (83%), Positives = 110/116 (94%), Gaps = 1/116 (0%)
 Frame = -1

Query: 362 IQGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFT 186
           +QGK+L L+DTV+ +VE+KVGKAVQKH+HLVREVDVRLS+RG +L KGPK+RRCEVTLFT
Sbjct: 14  LQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFT 73

Query: 185 KKHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPE 18
           KKHGVVRAEE  E+LYGSID+VSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVR+PE
Sbjct: 74  KKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPE 129


>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
           putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
           Plastid-specific 30S ribosomal protein 1, chloroplast
           precursor, putative [Ricinus communis]
          Length = 311

 Score =  197 bits (500), Expect = 1e-48
 Identities = 101/120 (84%), Positives = 110/120 (91%), Gaps = 1/120 (0%)
 Frame = -1

Query: 359 QGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFTK 183
           QGK+L L+DTVKK+VEDKVGKAVQKH+HLVREVDVRLSVRG +  KGPK+RRCEVTLFTK
Sbjct: 93  QGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTK 152

Query: 182 KHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPENVVEP 3
           KHGV+RAEED E++Y SIDLVSSIIQRKLRKIKEK SDHGRHMKGFNRLKVREP  V EP
Sbjct: 153 KHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREP--VAEP 210


>ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|222858512|gb|EEE96059.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/115 (84%), Positives = 109/115 (94%), Gaps = 1/115 (0%)
 Frame = -1

Query: 362 IQGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFT 186
           IQGK+L L+DTVK++VEDKVGKAVQKH+HLVREVDVRLSVRG +L KGP++RRCEVTLFT
Sbjct: 90  IQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGELGKGPRIRRCEVTLFT 149

Query: 185 KKHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREP 21
            +HGVVRAEED E++Y SIDLVSSIIQRKLRKIKEK+SDHGRHMKGFNRLKVREP
Sbjct: 150 NRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREP 204


>gb|ABK96666.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 268

 Score =  194 bits (493), Expect = 6e-48
 Identities = 98/119 (82%), Positives = 109/119 (91%), Gaps = 1/119 (0%)
 Frame = -1

Query: 362 IQGKHLTLSDTVKKYVEDKVGKAVQKHAHLVREVDVRLSVRGDKL-KGPKLRRCEVTLFT 186
           IQGKHL LSDTVKK+VEDKVGKAVQK +HLVR VDVRLSVRG +L KGP++RRCEVTLFT
Sbjct: 89  IQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELGKGPRIRRCEVTLFT 148

Query: 185 KKHGVVRAEEDTESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPENVV 9
           K+HGVVRAEED E++Y SIDL SSIIQRKLRKIK+K+SDHGRHMKGFNRLKVREP + V
Sbjct: 149 KRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQV 207