BLASTX nr result

ID: Coptis21_contig00005141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005141
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29873.3| unnamed protein product [Vitis vinifera]               69   4e-09
emb|CAN80644.1| hypothetical protein VITISV_016915 [Vitis vinifera]    69   4e-09
emb|CBI28490.3| unnamed protein product [Vitis vinifera]               64   1e-07
gb|AFW66893.1| putative homeodomain-like transcription factor su...    63   2e-07
ref|XP_002323310.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-07

>emb|CBI29873.3| unnamed protein product [Vitis vinifera]
          Length = 774

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = -3

Query: 625 EDMEFATVNNSLFNSQIASTEDSLDI-DWAEDYSCFKCNKGGHLLICSS--CKIAVHQSC 455
           E+   A    +  +S+     DSL I  W E   C KC K G LL+CSS  C + VH++C
Sbjct: 474 EEDGIAMERQNFLSSKCTFNHDSLSIAGWTEQNLCMKCTKDGQLLVCSSSGCPLVVHENC 533

Query: 454 LGFSASSNELDSFLCPGCSYSQXXXXXXXXXXXXXXXLNQLSSFLN 317
           LG   S + + +F CP C+YS+                 +L+SF+N
Sbjct: 534 LGCPPSFDNMGNFYCPFCAYSRAVSEYLESKKKVSLAKKELASFIN 579


>emb|CAN80644.1| hypothetical protein VITISV_016915 [Vitis vinifera]
          Length = 774

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = -3

Query: 625 EDMEFATVNNSLFNSQIASTEDSLDI-DWAEDYSCFKCNKGGHLLICSS--CKIAVHQSC 455
           E+   A    +  +S+     DSL I  W E   C KC K G LL+CSS  C + VH++C
Sbjct: 474 EEDGIAMERQNFLSSKCTFNHDSLSIAGWTEQNLCMKCTKDGQLLVCSSSGCPLVVHENC 533

Query: 454 LGFSASSNELDSFLCPGCSYSQXXXXXXXXXXXXXXXLNQLSSFLN 317
           LG   S + + +F CP C+YS+                 +L+SF+N
Sbjct: 534 LGCPPSFDNMGNFYCPFCAYSRAVSEYLESKKKVSLAKKELASFIN 579


>emb|CBI28490.3| unnamed protein product [Vitis vinifera]
          Length = 566

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = -3

Query: 571 STEDSLDIDWAEDYSCFKCNKGGHLLICSS--CKIAVHQSCLGFSASSNELDSFLCPGCS 398
           ST+  ++I+W +   C KC +GG +L+CS   C++AVH+ C+  SA+ +++  F CP C 
Sbjct: 117 STQAWMEIEWTQQSKCIKCGEGGEVLVCSDRVCRLAVHEKCMNCSAAFDDMGDFYCPYCW 176

Query: 397 Y 395
           Y
Sbjct: 177 Y 177


>gb|AFW66893.1| putative homeodomain-like transcription factor superfamily protein
           [Zea mays]
          Length = 800

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 40/95 (42%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
 Frame = -3

Query: 643 PFSSPSEDMEFATVNNSLFNSQIASTE------DSLDIDWAEDYS----CFKCNKGGHLL 494
           P SS     E A   ++   S+ AS E      D   ID  E  S    C KC KGG LL
Sbjct: 397 PGSSQDRGGESAKETSNELKSKDASPEIFVHFEDQYIIDTLEGLSQQDLCLKCGKGGQLL 456

Query: 493 ICSSCKIAVHQSCLGFSASSNELDSFLCPGCSYSQ 389
            CS C +AVH SCLG SA+    + F CP CSY +
Sbjct: 457 ECSRCFLAVHSSCLGSSATFEGTNLFYCPICSYKK 491


>ref|XP_002323310.1| predicted protein [Populus trichocarpa] gi|222867940|gb|EEF05071.1|
            predicted protein [Populus trichocarpa]
          Length = 827

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 53/255 (20%)
 Frame = -3

Query: 997  SSPPAPENAME-----IMQDGPPAGRSKRKRTESSTGRLKDCMNVDKTSMDTVVLILGGQ 833
            S+PP  ++ +E     +++D     R      ESS G L+  + V+    + V +   G 
Sbjct: 285  STPPQHKDMVEDSFEMVVEDSE--NRDFHLEKESSQGGLEGSIPVENDHDEDVGIDRHGH 342

Query: 832  NLDPLPACEPLEIPRGRRAQDLGKNGAGADDGSKIQQV---------------FSKRLRT 698
            +LD   A +  +      A  +  +G G    S + ++                S RL  
Sbjct: 343  SLDADNAFQHNQHEIAHNANKMPLSGDGLHQYSFVDEINRAEPRKSNAAPSVGTSDRLFV 402

Query: 697  TVNGGESSHG------TNVTIGKFPFSSPSEDMEFATVNNS------------------- 593
              N G+S H        +V+   F  ++ +++ E  T + S                   
Sbjct: 403  NGNKGKSDHSGQQKPSNSVSSNGFHRNTDADEREAGTDHLSEEDESNESDEYEQERVDVG 462

Query: 592  -----LFNSQIASTEDSL-DIDWAEDYSCFKCNKGGHLLICS--SCKIAVHQSCLGFSAS 437
                   +SQ   + DSL + +W +   C KC K G LL+C   SC + +H++CL FS  
Sbjct: 463  LRKSHFLSSQYMLSHDSLAEANWTDQNLCIKCCKDGQLLVCGAGSCSLVIHENCLVFSPH 522

Query: 436  SNELDSFLCPGCSYS 392
             +E   F CP C+YS
Sbjct: 523  FDERGDFYCPFCAYS 537


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