BLASTX nr result
ID: Coptis21_contig00005141
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005141 (1485 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29873.3| unnamed protein product [Vitis vinifera] 69 4e-09 emb|CAN80644.1| hypothetical protein VITISV_016915 [Vitis vinifera] 69 4e-09 emb|CBI28490.3| unnamed protein product [Vitis vinifera] 64 1e-07 gb|AFW66893.1| putative homeodomain-like transcription factor su... 63 2e-07 ref|XP_002323310.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-07 >emb|CBI29873.3| unnamed protein product [Vitis vinifera] Length = 774 Score = 68.6 bits (166), Expect = 4e-09 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 3/106 (2%) Frame = -3 Query: 625 EDMEFATVNNSLFNSQIASTEDSLDI-DWAEDYSCFKCNKGGHLLICSS--CKIAVHQSC 455 E+ A + +S+ DSL I W E C KC K G LL+CSS C + VH++C Sbjct: 474 EEDGIAMERQNFLSSKCTFNHDSLSIAGWTEQNLCMKCTKDGQLLVCSSSGCPLVVHENC 533 Query: 454 LGFSASSNELDSFLCPGCSYSQXXXXXXXXXXXXXXXLNQLSSFLN 317 LG S + + +F CP C+YS+ +L+SF+N Sbjct: 534 LGCPPSFDNMGNFYCPFCAYSRAVSEYLESKKKVSLAKKELASFIN 579 >emb|CAN80644.1| hypothetical protein VITISV_016915 [Vitis vinifera] Length = 774 Score = 68.6 bits (166), Expect = 4e-09 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 3/106 (2%) Frame = -3 Query: 625 EDMEFATVNNSLFNSQIASTEDSLDI-DWAEDYSCFKCNKGGHLLICSS--CKIAVHQSC 455 E+ A + +S+ DSL I W E C KC K G LL+CSS C + VH++C Sbjct: 474 EEDGIAMERQNFLSSKCTFNHDSLSIAGWTEQNLCMKCTKDGQLLVCSSSGCPLVVHENC 533 Query: 454 LGFSASSNELDSFLCPGCSYSQXXXXXXXXXXXXXXXLNQLSSFLN 317 LG S + + +F CP C+YS+ +L+SF+N Sbjct: 534 LGCPPSFDNMGNFYCPFCAYSRAVSEYLESKKKVSLAKKELASFIN 579 >emb|CBI28490.3| unnamed protein product [Vitis vinifera] Length = 566 Score = 63.5 bits (153), Expect = 1e-07 Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 2/61 (3%) Frame = -3 Query: 571 STEDSLDIDWAEDYSCFKCNKGGHLLICSS--CKIAVHQSCLGFSASSNELDSFLCPGCS 398 ST+ ++I+W + C KC +GG +L+CS C++AVH+ C+ SA+ +++ F CP C Sbjct: 117 STQAWMEIEWTQQSKCIKCGEGGEVLVCSDRVCRLAVHEKCMNCSAAFDDMGDFYCPYCW 176 Query: 397 Y 395 Y Sbjct: 177 Y 177 >gb|AFW66893.1| putative homeodomain-like transcription factor superfamily protein [Zea mays] Length = 800 Score = 62.8 bits (151), Expect = 2e-07 Identities = 40/95 (42%), Positives = 47/95 (49%), Gaps = 10/95 (10%) Frame = -3 Query: 643 PFSSPSEDMEFATVNNSLFNSQIASTE------DSLDIDWAEDYS----CFKCNKGGHLL 494 P SS E A ++ S+ AS E D ID E S C KC KGG LL Sbjct: 397 PGSSQDRGGESAKETSNELKSKDASPEIFVHFEDQYIIDTLEGLSQQDLCLKCGKGGQLL 456 Query: 493 ICSSCKIAVHQSCLGFSASSNELDSFLCPGCSYSQ 389 CS C +AVH SCLG SA+ + F CP CSY + Sbjct: 457 ECSRCFLAVHSSCLGSSATFEGTNLFYCPICSYKK 491 >ref|XP_002323310.1| predicted protein [Populus trichocarpa] gi|222867940|gb|EEF05071.1| predicted protein [Populus trichocarpa] Length = 827 Score = 61.6 bits (148), Expect = 5e-07 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 53/255 (20%) Frame = -3 Query: 997 SSPPAPENAME-----IMQDGPPAGRSKRKRTESSTGRLKDCMNVDKTSMDTVVLILGGQ 833 S+PP ++ +E +++D R ESS G L+ + V+ + V + G Sbjct: 285 STPPQHKDMVEDSFEMVVEDSE--NRDFHLEKESSQGGLEGSIPVENDHDEDVGIDRHGH 342 Query: 832 NLDPLPACEPLEIPRGRRAQDLGKNGAGADDGSKIQQV---------------FSKRLRT 698 +LD A + + A + +G G S + ++ S RL Sbjct: 343 SLDADNAFQHNQHEIAHNANKMPLSGDGLHQYSFVDEINRAEPRKSNAAPSVGTSDRLFV 402 Query: 697 TVNGGESSHG------TNVTIGKFPFSSPSEDMEFATVNNS------------------- 593 N G+S H +V+ F ++ +++ E T + S Sbjct: 403 NGNKGKSDHSGQQKPSNSVSSNGFHRNTDADEREAGTDHLSEEDESNESDEYEQERVDVG 462 Query: 592 -----LFNSQIASTEDSL-DIDWAEDYSCFKCNKGGHLLICS--SCKIAVHQSCLGFSAS 437 +SQ + DSL + +W + C KC K G LL+C SC + +H++CL FS Sbjct: 463 LRKSHFLSSQYMLSHDSLAEANWTDQNLCIKCCKDGQLLVCGAGSCSLVIHENCLVFSPH 522 Query: 436 SNELDSFLCPGCSYS 392 +E F CP C+YS Sbjct: 523 FDERGDFYCPFCAYS 537