BLASTX nr result
ID: Coptis21_contig00005122
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005122 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308734.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 gb|AFK43412.1| unknown [Medicago truncatula] 57 1e-06 ref|XP_003594372.1| Two-component response regulator EHD1 [Medic... 57 1e-06 ref|XP_003594371.1| Two-component response regulator EHD1 [Medic... 57 1e-06 gb|ACJ85036.1| unknown [Medicago truncatula] 57 1e-06 >ref|XP_002308734.1| predicted protein [Populus trichocarpa] gi|222854710|gb|EEE92257.1| predicted protein [Populus trichocarpa] Length = 360 Score = 60.1 bits (144), Expect = 2e-07 Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Frame = -1 Query: 203 AQGNYLKKIIEEQQRLSGSLTETPSSDITARTTG-----NXXXXXXXXXXXSEAPIQDKG 39 AQG YLKKIIEEQQRLSG L + P S +TA +G + SE+P+QDK Sbjct: 192 AQGKYLKKIIEEQQRLSGVLEDVPGSGVTAPVSGDNCPESDKTDPATPAPTSESPLQDKA 251 Query: 38 SKDRTLTKSLS 6 +K+R KSLS Sbjct: 252 AKERAPAKSLS 262 >gb|AFK43412.1| unknown [Medicago truncatula] Length = 205 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/66 (46%), Positives = 38/66 (57%) Frame = -1 Query: 203 AQGNYLKKIIEEQQRLSGSLTETPSSDITARTTGNXXXXXXXXXXXSEAPIQDKGSKDRT 24 AQG YLKKIIEEQQRLSG L+E P S ++A T G+ P +K +K+ Sbjct: 43 AQGKYLKKIIEEQQRLSGVLSEAPGSGVSAPTPGDMFQQELDNKTEPATPDPEKAAKEHA 102 Query: 23 LTKSLS 6 KSLS Sbjct: 103 PAKSLS 108 >ref|XP_003594372.1| Two-component response regulator EHD1 [Medicago truncatula] gi|355483420|gb|AES64623.1| Two-component response regulator EHD1 [Medicago truncatula] Length = 300 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/66 (46%), Positives = 38/66 (57%) Frame = -1 Query: 203 AQGNYLKKIIEEQQRLSGSLTETPSSDITARTTGNXXXXXXXXXXXSEAPIQDKGSKDRT 24 AQG YLKKIIEEQQRLSG L+E P S ++A T G+ P +K +K+ Sbjct: 138 AQGKYLKKIIEEQQRLSGVLSEAPGSGVSAPTPGDMFQQELDNKTEPATPDPEKAAKEHA 197 Query: 23 LTKSLS 6 KSLS Sbjct: 198 PAKSLS 203 >ref|XP_003594371.1| Two-component response regulator EHD1 [Medicago truncatula] gi|355483419|gb|AES64622.1| Two-component response regulator EHD1 [Medicago truncatula] Length = 330 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/66 (46%), Positives = 38/66 (57%) Frame = -1 Query: 203 AQGNYLKKIIEEQQRLSGSLTETPSSDITARTTGNXXXXXXXXXXXSEAPIQDKGSKDRT 24 AQG YLKKIIEEQQRLSG L+E P S ++A T G+ P +K +K+ Sbjct: 168 AQGKYLKKIIEEQQRLSGVLSEAPGSGVSAPTPGDMFQQELDNKTEPATPDPEKAAKEHA 227 Query: 23 LTKSLS 6 KSLS Sbjct: 228 PAKSLS 233 >gb|ACJ85036.1| unknown [Medicago truncatula] Length = 330 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/66 (46%), Positives = 38/66 (57%) Frame = -1 Query: 203 AQGNYLKKIIEEQQRLSGSLTETPSSDITARTTGNXXXXXXXXXXXSEAPIQDKGSKDRT 24 AQG YLKKIIEEQQRLSG L+E P S ++A T G+ P +K +K+ Sbjct: 168 AQGKYLKKIIEEQQRLSGVLSEAPGSGVSAPTPGDMFQQELDNKTEPATPDPEKAAKEHA 227 Query: 23 LTKSLS 6 KSLS Sbjct: 228 PAKSLS 233