BLASTX nr result

ID: Coptis21_contig00005097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005097
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002540459.1| conserved hypothetical protein [Ricinus comm...   106   6e-21
ref|NP_568401.1| uncharacterized protein [Arabidopsis thaliana] ...    94   3e-17
ref|NP_189897.1| uncharacterized protein [Arabidopsis thaliana] ...    94   4e-17
gb|AAM63728.1| unknown [Arabidopsis thaliana]                          93   7e-17
ref|XP_002874014.1| hypothetical protein ARALYDRAFT_488984 [Arab...    89   8e-16

>ref|XP_002540459.1| conserved hypothetical protein [Ricinus communis]
           gi|223495580|gb|EEF21924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score =  106 bits (264), Expect = 6e-21
 Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 8/187 (4%)
 Frame = +3

Query: 153 MDVLESQLEAIFFINHLSLDFLAILASSLWTWVAVLTATVSLWKIRAVGVHVHSPQRKSD 332
           M+VL+S+LEA+ F +++S     ++ ++LWTWVA+LTA VS W+I+  G+    P+  S 
Sbjct: 1   MNVLDSRLEALAF-DYVSFGIFTVV-NNLWTWVALLTAAVSFWRIKTAGLKSEQPRVLSS 58

Query: 333 ASLLSFH--------EQQIQEELQKPIIESVQHRSCNTCITSVLECDVDGITKGKFVMYF 488
           A  +  H        E    E    P +      S ++  + +   + DG+TKGKFVMY+
Sbjct: 59  AICIDTHNNNDEARPETSQPESPPSPTLSFSDTASSSSLSSRLSIFENDGVTKGKFVMYY 118

Query: 489 EDNADDEISTEAQGIDEENIYSCVKDVRSFEACDGMFVKRNWDLGWYRYQDLTVFDGNVV 668
             + + + + +  G     ++ C       E    +   R  ++GWYR QDLTVF+GNVV
Sbjct: 119 AGDRESDGNCDGDGCTVVGVWGCGGSEEWPERI--VLRTRMSEMGWYRNQDLTVFNGNVV 176

Query: 669 KLWDDDR 689
           +LWD+ R
Sbjct: 177 RLWDEVR 183


>ref|NP_568401.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332005506|gb|AED92889.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 193

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 67/190 (35%), Positives = 97/190 (51%), Gaps = 11/190 (5%)
 Frame = +3

Query: 153 MDVLESQLEAIFFINHLSLDFLAILASSLWTWVAVLTATVSLWKIRAVGVHVHSPQRKSD 332
           M  LES LEA+ F  + SL   A++ +++WTW+AV+TA VS W+IR   + V        
Sbjct: 1   MSTLESPLEALAF-EYASLGVFAVV-NNVWTWIAVVTAAVSFWRIRVTTIGVGDGHACVL 58

Query: 333 ASLLSFHEQQIQ------EELQKPIIESVQHRSCNTCITSVLECDVDGITKGKFVMYFED 494
              L+  + + +      + +  P+ E+V         T  L CD DG+TKGK  M +E 
Sbjct: 59  IEELTGSKSENESGRLEPKSITGPVKETVARVKETVTKTEPLICD-DGVTKGKLTMCYEV 117

Query: 495 NADDEISTEAQGIDEENIY-----SCVKDVRSFEACDGMFVKRNWDLGWYRYQDLTVFDG 659
           + D +      G      Y     +C  D   +E  DG+   RN D  WYRY DLTV +G
Sbjct: 118 DVDVDGGRCVNGDLTAVSYGGGLGNCGGDW--WEKWDGVVRMRNGDDSWYRYVDLTVING 175

Query: 660 NVVKLWDDDR 689
           NVV+LWDD++
Sbjct: 176 NVVRLWDDNK 185


>ref|NP_189897.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7529252|emb|CAB86482.1| putative protein [Arabidopsis
           thaliana] gi|46518379|gb|AAS99671.1| At3g43110
           [Arabidopsis thaliana] gi|48310350|gb|AAT41803.1|
           At3g43110 [Arabidopsis thaliana]
           gi|332644244|gb|AEE77765.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 191

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
 Frame = +3

Query: 153 MDVLESQLEAIFFINHLSLDFLAILASSLWTWVAVLTATVSLWKIRAVGVHVHSPQRKSD 332
           M  L+S LE + F      D++  + ++LWTW+AV+TA VS W+IRA      S   + +
Sbjct: 1   MATLDSPLEVLAF------DYVNFVFNNLWTWIAVVTAAVSFWRIRATTTTTTSGGGRDN 54

Query: 333 ASL-LSFHEQQIQEELQKPIIESVQHRSCNTCIT---SVLECDVDGITKGKFVMYFEDNA 500
             +  SF E    +  +  ++   +        T   S+L C  DG+TKGK  +Y+E+  
Sbjct: 55  GLIDESFLEPPKPQATKAALLMETKPPRVKVTETEDWSLLLCK-DGVTKGKLTVYYEEEI 113

Query: 501 DDEISTEAQGIDEENIYSCVKDVRSFEACDGMFVKRNWDLGWYRYQDLTVFDGNVVKLWD 680
           D E   E  G      Y   +    +E  + +   RN D GWYRY DLTV +GNVV+LWD
Sbjct: 114 DGE-REEDDGETTAVKYGGGESGEWWERWERVVKMRNGDEGWYRYVDLTVINGNVVRLWD 172

Query: 681 DDR 689
            +R
Sbjct: 173 ANR 175


>gb|AAM63728.1| unknown [Arabidopsis thaliana]
          Length = 193

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
 Frame = +3

Query: 153 MDVLESQLEAIFFINHLSLDFLAILASSLWTWVAVLTATVSLWKIRAVGVHVHSPQRKSD 332
           M  LES LEA+ F  + S    A++ +++WTW+AV+TA VS W+IR   + V        
Sbjct: 1   MSTLESPLEALAF-EYASFGVFAVV-NNVWTWIAVVTAAVSFWRIRVTTIGVGDGHACVL 58

Query: 333 ASLLSFHEQQIQ------EELQKPIIESVQHRSCNTCITSVLECDVDGITKGKFVMYFED 494
              L+  + + +      + +  P+ E+V         T  L CD DG+TK K  MY+E 
Sbjct: 59  IEELTGSKSENESGRLEPKSITGPVKETVARVKETVTKTEPLICD-DGVTKRKLTMYYEV 117

Query: 495 NADDEISTEAQGIDEENIY-----SCVKDVRSFEACDGMFVKRNWDLGWYRYQDLTVFDG 659
           + D +      G      Y     +C  D   +E  DG+   RN D  WYRY DLTV +G
Sbjct: 118 DVDVDGGRCVNGDLTAVSYGGGLGNCGGDW--WEKWDGVVRMRNGDDSWYRYVDLTVING 175

Query: 660 NVVKLWDDDR 689
           NVV+LWDD++
Sbjct: 176 NVVRLWDDNK 185


>ref|XP_002874014.1| hypothetical protein ARALYDRAFT_488984 [Arabidopsis lyrata subsp.
           lyrata] gi|297319851|gb|EFH50273.1| hypothetical protein
           ARALYDRAFT_488984 [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 61/185 (32%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
 Frame = +3

Query: 153 MDVLESQLEAIFFINHLSLDFLAILASSLWTWVAVLTATVSLWKIRAVGVHVHSPQRKSD 332
           M  LES LEA+ F  + S    A++ +++WTW+AV+TA VS W+IR   + V        
Sbjct: 1   MSTLESPLEALAF-EYASFGVFAVV-NNVWTWIAVVTAAVSFWRIRVTTIGVGDGHACVL 58

Query: 333 ASLLSFHEQQIQEELQKPIIESVQHRSCNTCITSVLECDVDGITKGKFVMYFEDNADDEI 512
              L+  + + +    +P   +   +   T  T+      DG+TKGK  MY+E + D + 
Sbjct: 59  IEELTGSKSENESGRLEPKSITGPVKETETVTTTEPLMYDDGVTKGKLTMYYEVDVDVDG 118

Query: 513 STEAQGIDEENIYSCVKDVRSFEACDGMFVK--------RNWDLGWYRYQDLTVFDGNVV 668
               + +D E   + V        C G + +        RN D GWYRY DLTV +GNVV
Sbjct: 119 ERCVESVDGE--LTAVSYGGGLGNCGGEWWEKWERVVRMRNGDDGWYRYVDLTVINGNVV 176

Query: 669 KLWDD 683
           + WDD
Sbjct: 177 RFWDD 181


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