BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005094
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    93   5e-21
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-15
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...    77   1e-13
ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798...    71   2e-12
ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago ...    71   4e-12

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 92.8 bits (229), Expect(2) = 5e-21
 Identities = 45/71 (63%), Positives = 54/71 (76%)
 Frame = +3

Query: 3   DMTYCKSILNEFAVKIGLEMPIYTTTQSNGLIPVFISTLDFHGKTYTSTPARSKKEAEQM 182
           D  +CKSILNEFAVK+ LE P YTT Q  GL+PVF+S+L F+G TYT    R+KKEAEQ+
Sbjct: 104 DTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVSSLVFNGVTYTGDAGRNKKEAEQL 163

Query: 183 GARSVIQFILG 215
            AR+VI  ILG
Sbjct: 164 AARTVILSILG 174



 Score = 35.4 bits (80), Expect(2) = 5e-21
 Identities = 46/171 (26%), Positives = 67/171 (39%), Gaps = 32/171 (18%)
 Frame = +1

Query: 271 VIQFILGTE-AGSLLSQIIKSKRKFFDAL-----PKVSKNAMLPMA------PCSKK--- 405
           VI  ILG   +G+LLS+IIKSK K + AL     P      +LP+       PC  K   
Sbjct: 168 VILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGLTSGIPPCKGKEVE 227

Query: 406 -----------------SAQIRDAPEIHSDVQPLKRAKLEHLCGCSTGVVENLTSDQTRL 534
                            S Q+   P  H  V  L++ K       S+ V+    S    +
Sbjct: 228 VAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHELEKPK----PNVSSEVIAPPISFVPSV 283

Query: 535 IGGLVTAAGTSGSXXXXXXXXXXDQREMMTDGCLQQNAYSVIQASPCSIAQ 687
               +  + T+G           + +++ TD  L      + QASPCS+AQ
Sbjct: 284 FEQPLVVSPTTGRKRNRKNKKKAN-KKLRTDAQLPVAVLPLNQASPCSVAQ 333


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 43/71 (60%), Positives = 52/71 (73%)
 Frame = +3

Query: 3   DMTYCKSILNEFAVKIGLEMPIYTTTQSNGLIPVFISTLDFHGKTYTSTPARSKKEAEQM 182
           D  +CKSILNEFAVK+  E P Y T QS GL+PVFISTL F G +YT    R+KKEAEQ+
Sbjct: 221 DTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVFISTLVFDGVSYTGDAGRNKKEAEQL 280

Query: 183 GARSVIQFILG 215
            AR+VI  ++G
Sbjct: 281 AARAVILSLIG 291


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score = 77.0 bits (188), Expect(2) = 1e-13
 Identities = 36/70 (51%), Positives = 48/70 (68%)
 Frame = +3

Query: 3   DMTYCKSILNEFAVKIGLEMPIYTTTQSNGLIPVFISTLDFHGKTYTSTPARSKKEAEQM 182
           D   CKSILNE+AVK+ LEMP Y T +  GL P+F+S+  F+G TY     R+KKEAEQ+
Sbjct: 97  DTVACKSILNEYAVKMQLEMPTYNTVKQGGLFPIFVSSSVFNGVTYNGDIGRTKKEAEQL 156

Query: 183 GARSVIQFIL 212
            AR+ +  +L
Sbjct: 157 AARAAVLSLL 166



 Score = 26.6 bits (57), Expect(2) = 1e-13
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
 Frame = +1

Query: 271 VIQFILGTEAGSLLSQIIKSKRKFFDALPKV----SKNAMLPMAPCSKKS-----AQIRD 423
           V+  +   E+G ++S+  KSKRK +    K     ++N+ +P+     K+     + +  
Sbjct: 162 VLSLLRNVESGEIISKFFKSKRKLYVGFHKSDSQDAQNSNMPVVGKDIKTEALMVSNVVP 221

Query: 424 APEIHSDVQP----LKRAKLEHLC 483
            PE  S + P      + K E +C
Sbjct: 222 IPEAASALHPPHHEFTKTKPEKIC 245


>ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798730 [Glycine max]
          Length = 434

 Score = 70.9 bits (172), Expect(2) = 2e-12
 Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
 Frame = +3

Query: 12  YCKSILNEFAVKIGLEMPIYTTTQSN--GLIPVFISTLDFHGKTYTSTPARSKKEAEQMG 185
           + KSI+NE+A K+ +E P Y T Q    G++P+FI++L F+G +YT  PAR+KKEAEQ  
Sbjct: 86  FSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPIFITSLVFNGTSYTGDPARTKKEAEQSA 145

Query: 186 ARSVIQFILG 215
           A++ I  I+G
Sbjct: 146 AKAAILSIMG 155



 Score = 28.5 bits (62), Expect(2) = 2e-12
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +1

Query: 271 VIQFILGTEAGSLLSQIIKSKRKFFDALPKVSKNAMLPMAPCSKKSA 411
           ++  +  + +G++L +IIKSK  F+DA+    ++   P A  S  +A
Sbjct: 150 ILSIMGDSSSGTVLVEIIKSKSIFYDAIKGKGRSLSQPSAVLSTTNA 196


>ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago truncatula]
           gi|355517709|gb|AES99332.1| hypothetical protein
           MTR_5g079490 [Medicago truncatula]
          Length = 357

 Score = 70.9 bits (172), Expect(2) = 4e-12
 Identities = 30/70 (42%), Positives = 49/70 (70%)
 Frame = +3

Query: 6   MTYCKSILNEFAVKIGLEMPIYTTTQSNGLIPVFISTLDFHGKTYTSTPARSKKEAEQMG 185
           +T+CK++LNE+A K+ +++P Y + +   +IP F+ TLD +G +YT   AR KK+A ++ 
Sbjct: 110 VTFCKTVLNEYASKLSIQLPTYKSVEYKEVIPYFVCTLDLNGTSYTGDAARRKKDAVELA 169

Query: 186 ARSVIQFILG 215
           AR+ I  ILG
Sbjct: 170 ARAAILSILG 179



 Score = 27.3 bits (59), Expect(2) = 4e-12
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +1

Query: 271 VIQFILGTEAGSLLSQIIKSKRKFFDA 351
           ++  +  + +G LL+QIIK+K K FD+
Sbjct: 174 ILSILGNSNSGVLLAQIIKTKAKLFDS 200