BLASTX nr result

ID: Coptis21_contig00005084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005084
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518692.1| conserved hypothetical protein [Ricinus comm...   366   5e-99
ref|XP_004136964.1| PREDICTED: kynurenine formamidase-like [Cucu...   365   1e-98
ref|XP_002300232.1| predicted protein [Populus trichocarpa] gi|2...   364   2e-98
gb|AFK40095.1| unknown [Medicago truncatula]                          362   1e-97
ref|XP_002869098.1| cyclase family protein [Arabidopsis lyrata s...   360   3e-97

>ref|XP_002518692.1| conserved hypothetical protein [Ricinus communis]
            gi|223542073|gb|EEF43617.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 274

 Score =  366 bits (940), Expect = 5e-99
 Identities = 182/274 (66%), Positives = 223/274 (81%), Gaps = 2/274 (0%)
 Frame = -2

Query: 1023 MSSPLVVLLILTYAFQLSLCTSPTQQAYPSL-NSDSCESTEFETDPLVPPRREVYGNGRI 847
            MS+ ++ LL+L   F  S   + +  AYP++  +     T  + D L P RREVYG+G+I
Sbjct: 1    MSNSIISLLVLLLLFSSSSTATASISAYPTIPGAVDTTFTATQHDNLTPIRREVYGDGKI 60

Query: 846  FDITHKFRESLPAFNSKTGLGKFIWLDESMKNGSGANLSKFELVVHTGTHVDAPGHMFDH 667
             DI+HK+  ++P++ S  GLG+F+WL  SMKNGS AN S+ +L  HTGTHVDAPGH+FDH
Sbjct: 61   LDISHKYTTNMPSWGSDEGLGQFLWLPASMKNGSLANNSEMKLPTHTGTHVDAPGHVFDH 120

Query: 666  YYDAGFDVDSLDLEVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVLFRTLNTDRRLM 487
            Y+DAGFDVD+LDLEVLNG ALLVDVPRD NITAEVM+SL+IP+GVRRVLFRTLNTDR+LM
Sbjct: 121  YFDAGFDVDTLDLEVLNGHALLVDVPRDSNITAEVMKSLHIPKGVRRVLFRTLNTDRQLM 180

Query: 486  WKSEFDTSFVGFMKDGAQWLVDNTDIKLVGVDYLSVATFDDLFPTHYVFLQGREIILVEG 307
            +K +FDTS+VGF KDGA+WLV+NTDIK+VG+DYLSVA + DL P+H VFL+GREIILVEG
Sbjct: 181  FKRQFDTSYVGFTKDGAKWLVENTDIKMVGIDYLSVAAYSDLIPSHLVFLEGREIILVEG 240

Query: 306  LKLDDINPGIYSVHCLPLR-LPADGSPIRCILIK 208
            LKLD+I  GIYSVHCLPLR L A+GSPIRCILIK
Sbjct: 241  LKLDNIQAGIYSVHCLPLRLLGAEGSPIRCILIK 274


>ref|XP_004136964.1| PREDICTED: kynurenine formamidase-like [Cucumis sativus]
          Length = 272

 Score =  365 bits (937), Expect = 1e-98
 Identities = 182/265 (68%), Positives = 210/265 (79%), Gaps = 2/265 (0%)
 Frame = -2

Query: 996 ILTYAFQLSLCTSPTQQAYPSLNSDSCESTEFETDPLVPPRREVYGNGRIFDITHKFRES 817
           +L   FQ  L  + +  AYPS+              L P RREVY NGRI DI+H+F   
Sbjct: 8   LLFLLFQALLLAAASTTAYPSVVDTGPTDCSLSDGDLTPIRREVYDNGRIIDISHRFTTD 67

Query: 816 LPAFNSKTGLGKFIWLDESMKNGSGANLSKFELVVHTGTHVDAPGHMFDHYYDAGFDVDS 637
           +PA+ S  GLG+F+WL +SMKNGS AN S+ +L  HTGTHVDAPGH+FDHY+DAGFDVD+
Sbjct: 68  MPAWESDQGLGQFLWLPKSMKNGSLANNSEMKLPAHTGTHVDAPGHVFDHYFDAGFDVDT 127

Query: 636 LDLEVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVLFRTLNTDRRLMWKSEFDTSFV 457
           LDLEVLNGP LLVDVPRDKNITAEVM+SLNIP+GVRRVLFRTLNTDR LMWK EFDTS+V
Sbjct: 128 LDLEVLNGPGLLVDVPRDKNITAEVMKSLNIPKGVRRVLFRTLNTDRGLMWKKEFDTSYV 187

Query: 456 GFMKDGAQWLVDNTDIKLVG-VDYLSVATFDDLFPTHYVFLQGREIILVEGLKLDDINPG 280
           GFMKDGA+WLV+NTDIKLV  +DYLSVA F DL P+H  FL+GRE ILVEGLKLD + PG
Sbjct: 188 GFMKDGAKWLVENTDIKLVVLIDYLSVAAFKDLIPSHLEFLRGRETILVEGLKLDGVQPG 247

Query: 279 IYSVHCLPLR-LPADGSPIRCILIK 208
           +YS+HCLPLR L A+GSPIRCILIK
Sbjct: 248 LYSIHCLPLRLLGAEGSPIRCILIK 272


>ref|XP_002300232.1| predicted protein [Populus trichocarpa] gi|222847490|gb|EEE85037.1|
            predicted protein [Populus trichocarpa]
          Length = 268

 Score =  364 bits (935), Expect = 2e-98
 Identities = 182/271 (67%), Positives = 222/271 (81%), Gaps = 2/271 (0%)
 Frame = -2

Query: 1014 PLVVLLILTYAFQLSLCTSPTQQAYPSLNSDSCES-TEFETDPLVPPRREVYGNGRIFDI 838
            PL++LL+L+      L T+ +  AYP++      S +  + D L+P R E+YGNG+IFDI
Sbjct: 3    PLLLLLLLS-----PLSTTASTAAYPTIPGTIDTSVSSSQPDNLIPIRNEIYGNGKIFDI 57

Query: 837  THKFRESLPAFNSKTGLGKFIWLDESMKNGSGANLSKFELVVHTGTHVDAPGHMFDHYYD 658
            +H++   +P ++SK GLGKF+ L  SMKNGS AN S+ +L  HTGTHVD+PGH+FDHY+D
Sbjct: 58   SHRYINDMPVWDSKDGLGKFLSLPASMKNGSLANNSEMKLPTHTGTHVDSPGHVFDHYFD 117

Query: 657  AGFDVDSLDLEVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVLFRTLNTDRRLMWKS 478
            +GFDVD+LDLEVLNGPALLVDVPR  NITAEVM+SL+IP+GVRRVLFRTLNTDRRLM+K 
Sbjct: 118  SGFDVDTLDLEVLNGPALLVDVPRHSNITAEVMKSLHIPKGVRRVLFRTLNTDRRLMFKR 177

Query: 477  EFDTSFVGFMKDGAQWLVDNTDIKLVGVDYLSVATFDDLFPTHYVFLQGREIILVEGLKL 298
            EFD S+VGF KDGA+WLVDNTDIKLVG+DYLSVA + DL P+H VFL+GREIILVE LKL
Sbjct: 178  EFDRSYVGFTKDGAKWLVDNTDIKLVGIDYLSVAAWSDLIPSHLVFLEGREIILVEALKL 237

Query: 297  DDINPGIYSVHCLPLRL-PADGSPIRCILIK 208
            DDI PG+YSVHCLPLRL  A+GSPIRC+LIK
Sbjct: 238  DDIQPGVYSVHCLPLRLFGAEGSPIRCVLIK 268


>gb|AFK40095.1| unknown [Medicago truncatula]
          Length = 254

 Score =  362 bits (928), Expect = 1e-97
 Identities = 173/230 (75%), Positives = 203/230 (88%), Gaps = 1/230 (0%)
 Frame = -2

Query: 894 DPLVPPRREVYGNGRIFDITHKFRESLPAFNSKTGLGKFIWLDESMKNGSGANLSKFELV 715
           D L+PPRREVY NG+IFDITH+++  +PAF +  G+G+F+WL +SMKNGS AN S+ +L 
Sbjct: 24  DNLIPPRREVYDNGKIFDITHRYQPDMPAFETNDGIGQFLWLPKSMKNGSIANNSEMKLP 83

Query: 714 VHTGTHVDAPGHMFDHYYDAGFDVDSLDLEVLNGPALLVDVPRDKNITAEVMESLNIPRG 535
            HTGTHVDAPGH+FDHY+DAGFDVDSLDL VLNGPALLVDVPRD NITAEVM+SLNIPRG
Sbjct: 84  THTGTHVDAPGHVFDHYFDAGFDVDSLDLHVLNGPALLVDVPRDSNITAEVMKSLNIPRG 143

Query: 534 VRRVLFRTLNTDRRLMWKSEFDTSFVGFMKDGAQWLVDNTDIKLVGVDYLSVATFDDLFP 355
           V+RVLFRTLNTDRRLM++ EFD+S+VGF  DGA+WLV+NTDIKLVG+DYLSVA++D L P
Sbjct: 144 VKRVLFRTLNTDRRLMFQKEFDSSYVGFTVDGAKWLVENTDIKLVGIDYLSVASYDYLIP 203

Query: 354 THYVFLQGREIILVEGLKLDDINPGIYSVHCLPLRLP-ADGSPIRCILIK 208
           +H VFL+ RE ILVE LKLDDI PG+YSVHCLPLRL  A+GSPIRCILIK
Sbjct: 204 SHLVFLKDRESILVESLKLDDIPPGLYSVHCLPLRLAGAEGSPIRCILIK 253


>ref|XP_002869098.1| cyclase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297314934|gb|EFH45357.1| cyclase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score =  360 bits (925), Expect = 3e-97
 Identities = 179/272 (65%), Positives = 220/272 (80%), Gaps = 1/272 (0%)
 Frame = -2

Query: 1023 MSSPLVVLLILTYAFQLSLCTSPTQQAYPSLNSDSCESTEFETDPLVPPRREVYGNGRIF 844
            M+ P + LL+   +    L ++    AYPS+   +     F TD L P RREVYG+G+I+
Sbjct: 1    MAVPPLFLLLTLLSLPSLLISASASDAYPSIPGTAPIDGGF-TDELKPIRREVYGHGKIY 59

Query: 843  DITHKFRESLPAFNSKTGLGKFIWLDESMKNGSGANLSKFELVVHTGTHVDAPGHMFDHY 664
            DI+H++   +P+++S  GLG+F+WL  SMKNGS AN S+ ++  HTGTHVD+PGH++D+Y
Sbjct: 60   DISHRYTPDMPSWDSSEGLGRFLWLAASMKNGSLANNSEMKIPTHTGTHVDSPGHVYDNY 119

Query: 663  YDAGFDVDSLDLEVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVLFRTLNTDRRLMW 484
            YDAGFDVDSLDL+VLNG ALLVDVP+DKNITAEVM+SL+IP+GV RVLFRTLNTDRRLM+
Sbjct: 120  YDAGFDVDSLDLQVLNGLALLVDVPKDKNITAEVMKSLHIPKGVSRVLFRTLNTDRRLMF 179

Query: 483  KSEFDTSFVGFMKDGAQWLVDNTDIKLVGVDYLSVATFDDLFPTHYVFLQGREIILVEGL 304
            K EFDTS+VGFMKDGAQWLVDNTDIKLVG+DYLSVA +DDL P+H VFL+ RE ILVEGL
Sbjct: 180  KKEFDTSYVGFMKDGAQWLVDNTDIKLVGIDYLSVAAYDDLIPSHLVFLKDRETILVEGL 239

Query: 303  KLDDINPGIYSVHCLPLRL-PADGSPIRCILI 211
            KLD +  G+YSVHCLPLRL  A+GSPIRCILI
Sbjct: 240  KLDGVKAGLYSVHCLPLRLVGAEGSPIRCILI 271


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