BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005080
         (2194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin...   369   2e-99
emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]   358   3e-96
ref|XP_002319865.1| predicted protein [Populus trichocarpa] gi|2...   357   1e-95
ref|XP_002510776.1| RNA-binding region-containing protein, putat...   355   2e-95
tpg|DAA56565.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea m...   318   1e-89

>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
            gi|297734754|emb|CBI16988.3| unnamed protein product
            [Vitis vinifera]
          Length = 264

 Score =  369 bits (947), Expect = 2e-99
 Identities = 186/269 (69%), Positives = 208/269 (77%), Gaps = 3/269 (1%)
 Frame = -3

Query: 1961 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRKYFEQFGDILEAVVITDKNTGRSKGYG 1782
            MTPANLA QFGDTTYTKVFVGGLAWETQ+ETM+KYFEQFG+ILEAVVITDK TGRSKGYG
Sbjct: 1    MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYG 60

Query: 1781 FVTFREQEAAMRACMDPSPVIDGRRANCNLASLGVQKSRPATPKQGGARNFRVMNSFHST 1602
            FVTFRE +AAMRAC+D +PVIDGRRANCNLASLGVQ+S+P+TPK GG RNFRVM SF + 
Sbjct: 61   FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGRNFRVMGSFQT- 119

Query: 1601 XXXXXXXXGSATFPSAATFPHYAIQQGIPYNVXXXXXXXXXXXXXXXXYNVYGGGAATQY 1422
                        FPSAATFPHYAIQQGIPYN+                Y+VY GGAA QY
Sbjct: 120  ---GFQGGVGTAFPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVY-GGAAAQY 175

Query: 1421 PMYGGGSNGMMTGATAAYYPYLQFGQGNGGNTSA--YTTGQGYSLQYPHHLYPYSTINST 1248
            P+YG G  GMMTGA AA+YPYLQFG+G+GG  ++  YT+GQGY +QYPHHL  YS INST
Sbjct: 176  PVYGAGPGGMMTGAGAAFYPYLQFGEGSGGAAASGGYTSGQGYGVQYPHHLVQYSAINST 235

Query: 1247 GFAP-HYGGPMSLGPTAPTQAVCFTLQQA 1164
            G  P HYG PMSL PT   Q+VCF + QA
Sbjct: 236  GGYPQHYGAPMSLAPTPALQSVCFAVPQA 264


>emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]
          Length = 269

 Score =  358 bits (919), Expect = 3e-96
 Identities = 181/261 (69%), Positives = 202/261 (77%), Gaps = 3/261 (1%)
 Frame = -3

Query: 1961 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRKYFEQFGDILEAVVITDKNTGRSKGYG 1782
            MTPANLA QFGDTTYTKVFVGGLAWETQ+ETM+KYFEQFG+ILEAVVITDK TGRSKGYG
Sbjct: 1    MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYG 60

Query: 1781 FVTFREQEAAMRACMDPSPVIDGRRANCNLASLGVQKSRPATPKQGGARNFRVMNSFHST 1602
            FVTFRE +AAMRAC+D +PVIDGRRANCNLASLGVQ+S+P+TPK GG RNFRVM SF + 
Sbjct: 61   FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGRNFRVMGSFQT- 119

Query: 1601 XXXXXXXXGSATFPSAATFPHYAIQQGIPYNVXXXXXXXXXXXXXXXXYNVYGGGAATQY 1422
                        FPSAATFPHYAIQQGIPYN+                Y+VY GGAA QY
Sbjct: 120  ---GFQGGVGTAFPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVY-GGAAAQY 175

Query: 1421 PMYGGGSNGMMTGATAAYYPYLQFGQGNGGNTSA--YTTGQGYSLQYPHHLYPYSTINST 1248
            P+YG G  GMMTGA AA+YPYLQFG+G+GG  ++  YT+GQGY +QYPHHL  YS INST
Sbjct: 176  PVYGAGPGGMMTGAGAAFYPYLQFGEGSGGAAASGGYTSGQGYGVQYPHHLVQYSAINST 235

Query: 1247 GFAP-HYGGPMSLGPTAPTQA 1188
            G  P HYG PMSL PT   Q+
Sbjct: 236  GGYPQHYGAPMSLAPTPALQS 256


>ref|XP_002319865.1| predicted protein [Populus trichocarpa] gi|222858241|gb|EEE95788.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score =  357 bits (915), Expect = 1e-95
 Identities = 181/271 (66%), Positives = 206/271 (76%), Gaps = 5/271 (1%)
 Frame = -3

Query: 1961 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRKYFEQFGDILEAVVITDKNTGRSKGYG 1782
            MTP+NLA QFGDTTYTKVFVGGLAWETQ+ETM+KYFEQFG+ILEAVVI DK TGRSKGYG
Sbjct: 1    MTPSNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVIADKATGRSKGYG 60

Query: 1781 FVTFREQEAAMRACMDPSPVIDGRRANCNLASLGVQKSRPATPKQGGA-RNFRVMNSFHS 1605
            FVTFRE +AAMRAC+D SPVIDGRRANCNLASLGVQ+S+P+TPK G A RNFRVM+SF +
Sbjct: 61   FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHGAAGRNFRVMSSFQT 120

Query: 1604 TXXXXXXXXGSATFPSAATFPHYAIQQGIPYNVXXXXXXXXXXXXXXXXYNVYGGGAATQ 1425
                         FPSAA+FPHYAIQQGIPYNV                YN+Y GGA  Q
Sbjct: 121  ----GFGGGVGTAFPSAASFPHYAIQQGIPYNVYGYSSYSPDYTYPASYYNMY-GGATAQ 175

Query: 1424 YPMYGGGSNGMMTGATAAYYPYLQFGQGNGGNTSAY--TTGQGYSLQYPHHLYPYSTINS 1251
            YPMYG G  GMM GA AA+YPYLQFG+G+ G  ++Y  T+GQ Y +QYPHHL+ YS+INS
Sbjct: 176  YPMYGSGHGGMMNGAAAAFYPYLQFGEGSTGGATSYSNTSGQSYGVQYPHHLFQYSSINS 235

Query: 1250 T--GFAPHYGGPMSLGPTAPTQAVCFTLQQA 1164
            T  G+  HYG PMSL PTA   +VCF + QA
Sbjct: 236  TTGGYPQHYGAPMSLAPTAALPSVCFAVPQA 266


>ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
            gi|223551477|gb|EEF52963.1| RNA-binding region-containing
            protein, putative [Ricinus communis]
          Length = 259

 Score =  355 bits (912), Expect = 2e-95
 Identities = 179/269 (66%), Positives = 209/269 (77%), Gaps = 3/269 (1%)
 Frame = -3

Query: 1961 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRKYFEQFGDILEAVVITDKNTGRSKGYG 1782
            MTP+NLA QFGDTTYTKVFVGGLAWETQ++TM+KYFEQFG+ILEAVVITDK TGRSKGYG
Sbjct: 1    MTPSNLAGQFGDTTYTKVFVGGLAWETQKDTMKKYFEQFGEILEAVVITDKATGRSKGYG 60

Query: 1781 FVTFREQEAAMRACMDPSPVIDGRRANCNLASLGVQKSRPATPKQ--GGARNFRVMNSFH 1608
            FVTFR+ EAAMRAC+D +PVIDGRRANCNLASLGVQ+S+P+TPK   GG RN RV++SF 
Sbjct: 61   FVTFRDPEAAMRACVDSAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGRNLRVISSFQ 120

Query: 1607 STXXXXXXXXGSATFPSAATFPHYAIQQGIPYNVXXXXXXXXXXXXXXXXYNVYGGGAAT 1428
            +             FPSAA+FPHYAIQQGIPYNV                YNVY GGA  
Sbjct: 121  T--------GFGTAFPSAASFPHYAIQQGIPYNVYGYSPYSPEYTYPTSYYNVY-GGATA 171

Query: 1427 QYPMYGGGSNGMMTGATAAYYPYLQFGQGNGGNTSAYTTGQGYSLQYPHHLYPYSTINST 1248
            QYPMYG G +GMM+GA AA+YPYLQFG+G+GG TS Y++ Q Y++QYPHHL+ YS +NST
Sbjct: 172  QYPMYGTGHSGMMSGAAAAFYPYLQFGEGSGGATS-YSSSQNYNVQYPHHLFQYSAVNST 230

Query: 1247 GFAP-HYGGPMSLGPTAPTQAVCFTLQQA 1164
            G  P H+G P+SL PTA  Q+VCF + QA
Sbjct: 231  GGYPQHFGAPLSLAPTASLQSVCFAVPQA 259


>tpg|DAA56565.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea mays]
          Length = 295

 Score =  318 bits (814), Expect(2) = 1e-89
 Identities = 163/263 (61%), Positives = 194/263 (73%), Gaps = 5/263 (1%)
 Frame = -3

Query: 1961 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRKYFEQFGDILEAVVITDKNTGRSKGYG 1782
            M+P ++  QFGDTTYTKVFVGGLAWETQ+ETMRKYFEQFG+ILEAVVITDKNTGRSKGYG
Sbjct: 1    MSPPSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYG 60

Query: 1781 FVTFREQEAAMRACMDPSPVIDGRRANCNLASLGVQKSRPATPKQGGARNFRVMNSFHST 1602
            FVTFR+ +AAMRAC+DP+PVIDGRRANCNLASLGVQ+SRP TP+ GGARNFRVM SF+  
Sbjct: 61   FVTFRDPDAAMRACVDPAPVIDGRRANCNLASLGVQRSRPPTPQHGGARNFRVMKSFNQ- 119

Query: 1601 XXXXXXXXGSATFPSAATFPHYAIQQGIPYNVXXXXXXXXXXXXXXXXYNVYGGGAATQY 1422
                      A FPS ATFPHYAI QG+P++V                YN+YGG    QY
Sbjct: 120  -QAGIQGGLGAAFPSHATFPHYAIPQGLPFHVYGYSPYTPDYGYPTNFYNIYGG---AQY 175

Query: 1421 PMYGGGSNGMMTGATAAYYPYLQFGQGNGGNTSAYTTGQGYSLQYPHHLYPYSTINS--- 1251
            P YGG + GM+TG T+ +YPY QFGQ +G  T+ YT+GQGY+LQ    ++ +ST++S   
Sbjct: 176  PFYGGATAGMVTG-TSPFYPYFQFGQ-SGNTTTNYTSGQGYNLQQYPQMFHFSTVSSTAA 233

Query: 1250 --TGFAPHYGGPMSLGPTAPTQA 1188
              TGFA  YGGP+SL  +   QA
Sbjct: 234  AVTGFAQQYGGPLSLAASPQAQA 256



 Score = 40.8 bits (94), Expect(2) = 1e-89
 Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 6/39 (15%)
 Frame = -2

Query: 1167 GVTMALTTPTVPVP-----PYRIIPTHFTPTLS-EQPSA 1069
            G+TMALT PT+P P     PYR+IP+HF  + + EQP A
Sbjct: 257  GMTMALTAPTLPTPTQAAHPYRLIPSHFAVSAAPEQPLA 295