BLASTX nr result

ID: Coptis21_contig00005079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005079
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   257   5e-66
ref|NP_001241561.1| uncharacterized protein LOC100816369 [Glycin...   231   4e-58
gb|ACU24554.1| unknown [Glycine max]                                  221   3e-55
ref|XP_003525385.1| PREDICTED: uncharacterized protein LOC100790...   217   7e-54
ref|XP_002509832.1| protein binding protein, putative [Ricinus c...   216   9e-54

>ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Vitis
           vinifera]
          Length = 213

 Score =  257 bits (657), Expect = 5e-66
 Identities = 125/212 (58%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
 Frame = +2

Query: 95  MGGCCCCASRRDQLNGTPVYYYCPQSLEEREXXXXXXXXXXXXXXXXXVDTNLDTSTPDT 274
           MGGCCCC+S+  +LNGTP YYYCP++ EE E                 VDTNL TS PDT
Sbjct: 1   MGGCCCCSSKGTELNGTPAYYYCPRASEEHEPLSSHHGAASTLSTGLLVDTNLGTSPPDT 60

Query: 275 YRAPPAPMPYDTDLGRPQTPPVIQGSRCNKIDAAAHATDSQSMEGIISGCVVGTPASGDE 454
           YR PPAP+PYD DLG PQTPPV + S  NK D     T+S S+   + G ++ T A  ++
Sbjct: 61  YRPPPAPIPYDVDLGHPQTPPVAEESCVNKNDTVVQTTNSGSLGEAVEGNMLETLAKCED 120

Query: 455 LKESDCKGQVDSVLPSSKEAEVEPSKLSESL-SVTEEED-CPICLEEYDAENPRIVTKCD 628
           LK+SDCK    S L SSKE EVE SK  + + S T+EED CP CLEEYDAENP+IVTKC+
Sbjct: 121 LKQSDCKMLAQSELTSSKETEVELSKSGDPIVSSTDEEDVCPTCLEEYDAENPKIVTKCE 180

Query: 629 HHFHLSCILEWMERSDTCPVCDQEMIFNNNIN 724
           HHFHL+CILEWMERSDTCPVCD+EMIFN   N
Sbjct: 181 HHFHLACILEWMERSDTCPVCDKEMIFNTATN 212


>ref|NP_001241561.1| uncharacterized protein LOC100816369 [Glycine max]
           gi|255641755|gb|ACU21148.1| unknown [Glycine max]
          Length = 213

 Score =  231 bits (589), Expect = 4e-58
 Identities = 109/209 (52%), Positives = 144/209 (68%), Gaps = 3/209 (1%)
 Frame = +2

Query: 95  MGGCCCC--ASRRDQLNGTPVYYYCPQSLEEREXXXXXXXXXXXXXXXXXVDTNLDTSTP 268
           MGGCCCC  +++   L+  P YYY P++ EE                   VDTNLDTS+P
Sbjct: 1   MGGCCCCCCSAKETVLSAPPAYYYYPRASEEHVPLSSHQGAASAFSGRLLVDTNLDTSSP 60

Query: 269 DTYRAPPAPMPYDTDLGRPQTPPVIQGSRCNKIDAAAHATDSQSMEGIISGCVVGTPASG 448
           DTYR PPAP+P++  LG  QTPP  Q  R +K + + H+T+S +++  ++G   GT A  
Sbjct: 61  DTYRPPPAPIPFNVTLGTTQTPPAAQEIRSDKNNTSLHSTNSNAIQEPVAGDNHGTSAKL 120

Query: 449 DELKESDCKGQVDSVLPSSKEAEVEPSKLSESLSVTEEED-CPICLEEYDAENPRIVTKC 625
           +ELKESDCK Q D  L S+K +E+E +K  + + V EEED CPICLEEYDAENP++ TKC
Sbjct: 121 EELKESDCKVQTDLELDSAKGSEIELAKSGKPIDVVEEEDTCPICLEEYDAENPKLATKC 180

Query: 626 DHHFHLSCILEWMERSDTCPVCDQEMIFN 712
           DHHFHL+CILEWMERS+TCPVCDQ+++F+
Sbjct: 181 DHHFHLACILEWMERSETCPVCDQDLVFD 209


>gb|ACU24554.1| unknown [Glycine max]
          Length = 212

 Score =  221 bits (564), Expect = 3e-55
 Identities = 104/208 (50%), Positives = 141/208 (67%), Gaps = 2/208 (0%)
 Frame = +2

Query: 95  MGGCCCCASRRDQ-LNGTPVYYYCPQSLEEREXXXXXXXXXXXXXXXXXVDTNLDTSTPD 271
           MGGCCCC S ++  L+  P YYY P++ EE                   VDTNLDTS+PD
Sbjct: 1   MGGCCCCCSSKETVLSAPPAYYYYPRASEEHVPLSSHPGAASAFSGRLLVDTNLDTSSPD 60

Query: 272 TYRAPPAPMPYDTDLGRPQTPPVIQGSRCNKIDAAAHATDSQSMEGIISGCVVGTPASGD 451
           TYR PPAP+P++  LG  QTPP  Q  R +K + +  +T+S +++  ++  + GT A  +
Sbjct: 61  TYRPPPAPIPFNVTLGTTQTPPAAQEIRSDKNNTSLPSTNSNAIQEPVARDIHGTSAKLE 120

Query: 452 ELKESDCKGQVDSVLPSSKEAEVEPSKLSESLSVTEEED-CPICLEEYDAENPRIVTKCD 628
           E KES+CK Q D  L S+K +E+E +K  + + + EEED CPICLEEYDAENP++ T CD
Sbjct: 121 EPKESECKVQTDLELDSAKGSEIELAKSGKPIDLVEEEDACPICLEEYDAENPKLATNCD 180

Query: 629 HHFHLSCILEWMERSDTCPVCDQEMIFN 712
           HHFHL+CILEWMERS+TCPVCDQ+++F+
Sbjct: 181 HHFHLACILEWMERSETCPVCDQDLVFD 208


>ref|XP_003525385.1| PREDICTED: uncharacterized protein LOC100790079 [Glycine max]
          Length = 213

 Score =  217 bits (552), Expect = 7e-54
 Identities = 104/209 (49%), Positives = 141/209 (67%), Gaps = 3/209 (1%)
 Frame = +2

Query: 95  MGGCCCCASRRDQ-LNGTPVYYY-CPQSLEEREXXXXXXXXXXXXXXXXXVDTNLDTSTP 268
           MGGCCCC S ++  L+  P YYY  P++ EE                   VDTNLDTS+P
Sbjct: 1   MGGCCCCCSSKETVLSAPPAYYYQYPRASEEHVPLSSHPGAASAFSGRLLVDTNLDTSSP 60

Query: 269 DTYRAPPAPMPYDTDLGRPQTPPVIQGSRCNKIDAAAHATDSQSMEGIISGCVVGTPASG 448
           DTYR PPAP+P++  LG  QTPP  Q  R +K + +  +T+S +++  ++  + GT A  
Sbjct: 61  DTYRPPPAPIPFNVTLGTTQTPPAAQEIRSDKNNTSLPSTNSNAIQEPVARDIHGTSAKL 120

Query: 449 DELKESDCKGQVDSVLPSSKEAEVEPSKLSESLSVTEEED-CPICLEEYDAENPRIVTKC 625
           +E KES+CK Q D  L S+K +E+E +K  + + + EEED CPICLEEYDAENP++ T C
Sbjct: 121 EEPKESECKVQTDLELDSAKGSEIELAKSGKPIDLVEEEDACPICLEEYDAENPKLATNC 180

Query: 626 DHHFHLSCILEWMERSDTCPVCDQEMIFN 712
           DHHFHL+CILEWMERS+TCPVCDQ+++F+
Sbjct: 181 DHHFHLACILEWMERSETCPVCDQDLVFD 209


>ref|XP_002509832.1| protein binding protein, putative [Ricinus communis]
           gi|223549731|gb|EEF51219.1| protein binding protein,
           putative [Ricinus communis]
          Length = 212

 Score =  216 bits (551), Expect = 9e-54
 Identities = 108/208 (51%), Positives = 132/208 (63%), Gaps = 2/208 (0%)
 Frame = +2

Query: 95  MGGCCCCASRRDQLNGTPVYYYCPQSLEEREXXXXXXXXXXXXXXXXXVDTNLDTSTPDT 274
           MGGCCCC+S+  ++N  P YYY P++ EE                   VDTNLDTS PD 
Sbjct: 1   MGGCCCCSSKGAEINSAPAYYYYPRASEEHVPLSSRHGSVATLSTGLLVDTNLDTSVPDA 60

Query: 275 YRAPPAPMPYDTDLGRPQTPPVIQGSRCNKIDAAAHATDSQSMEGIISGCVVGTPASGDE 454
           YR PP P+P++  +G PQTP   Q +  +K D     T+S S++         T    ++
Sbjct: 61  YRPPPPPIPFEMAIGCPQTPQGAQETSSDKDDGTVQTTNSGSVQETTYTNTRETSIKCED 120

Query: 455 LKESDCKGQVDSVLPSSKEAEVEPSKLSESL-SVTEEED-CPICLEEYDAENPRIVTKCD 628
           +KE DCK Q +  L S+KE EVE SK  E L S TEEED CP CLEEYDAENP+I TKC+
Sbjct: 121 VKEPDCKAQTNLELDSAKELEVEFSKSVELLVSATEEEDVCPTCLEEYDAENPKITTKCE 180

Query: 629 HHFHLSCILEWMERSDTCPVCDQEMIFN 712
           HHFHLSCILEWMERSDTCPVCD+EMI +
Sbjct: 181 HHFHLSCILEWMERSDTCPVCDKEMIID 208


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