BLASTX nr result

ID: Coptis21_contig00005076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005076
         (1494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272428.2| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   476   e-132
ref|XP_002534297.1| conserved hypothetical protein [Ricinus comm...   473   e-131
emb|CAN71395.1| hypothetical protein VITISV_036125 [Vitis vinifera]   461   e-127
ref|XP_003543270.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   454   e-125
ref|XP_002309784.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125

>ref|XP_002272428.2| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like
            [Vitis vinifera] gi|297743846|emb|CBI36729.3| unnamed
            protein product [Vitis vinifera]
          Length = 382

 Score =  476 bits (1224), Expect = e-132
 Identities = 241/370 (65%), Positives = 294/370 (79%), Gaps = 3/370 (0%)
 Frame = -1

Query: 1350 MLGNQGVHVSTCPTALP-LVTFIPNESRNFVACR--KSKRVLRVAQASSSSNNTEQNPTP 1180
            M+GN  V V TCP AL   +  +P  S NF+ C   +S++ L + +A+S+     Q P+P
Sbjct: 1    MVGNPIVQVPTCPAALSSALATLPWGSGNFMPCLPPRSRKKLLLVRANSADAGHSQPPSP 60

Query: 1179 SSSKTPFSIVLDVPKAIWRQTLRPLSDFGFGKKSIWEGGVGLFIVSGAVIFALSMVWLRG 1000
            S +K P +++LD P+ +W+QTLRPLSDFGFG++SIWEGGVGLF+VSG V+  LS+ WLRG
Sbjct: 61   SKTKNPLAVILDFPRNVWKQTLRPLSDFGFGRRSIWEGGVGLFLVSGTVLLVLSLAWLRG 120

Query: 999  FYFRSRLRKYQAVFEFSQACGICTGTPVRIRGVTVGNVIRINPSLKSIEAVVEVEDEKVI 820
            F  RS+ RKY AVFEF+QACGIC GTPVRIRGVTVGNVI++NPSLKSIEAVVEVED+K+I
Sbjct: 121  FQLRSKFRKYLAVFEFTQACGICKGTPVRIRGVTVGNVIQVNPSLKSIEAVVEVEDDKII 180

Query: 819  IPRNSLIEVNQSGLLMETLXXXXXXXXXXXXXXXXXXXDCVKEGLIVCDRQKIRGQQGVS 640
            IP+NSLIEVNQSGLLMETL                   DC KEG+IVCDRQKIRG QGVS
Sbjct: 181  IPQNSLIEVNQSGLLMETLIDITPRDPLPTPSVGPLDPDCTKEGVIVCDRQKIRGYQGVS 240

Query: 639  LDALVGIFTRLGREMEEIGVSRSYLLAERVASVIQEAKPLLAKIEEMAEDVQPLLAEVRD 460
            LDALVGIFTRLGRE+EEIG+++ Y +AER  S+I+EA+PLLAKI+ MAEDVQPL+ E RD
Sbjct: 241  LDALVGIFTRLGREVEEIGIAQGYSMAERALSIIEEARPLLAKIKAMAEDVQPLVTEFRD 300

Query: 459  SGLLKEVETLTKSLTEVADDLRKVNSSIMNPENTEQIRKSIYSFVFTLKNIENISSDISS 280
            +GLLKEVE+LTKSL +  ++LR+V+SSI+ PENTE I+KSIY+ +FTLKNIENISSDI  
Sbjct: 301  TGLLKEVESLTKSLAQATEELRRVHSSILTPENTELIQKSIYTLIFTLKNIENISSDILG 360

Query: 279  FTGDEATRRN 250
            FTGDEATRRN
Sbjct: 361  FTGDEATRRN 370


>ref|XP_002534297.1| conserved hypothetical protein [Ricinus communis]
            gi|223525556|gb|EEF28089.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 388

 Score =  473 bits (1216), Expect = e-131
 Identities = 250/380 (65%), Positives = 294/380 (77%), Gaps = 13/380 (3%)
 Frame = -1

Query: 1350 MLGNQGVHVSTCPTALPLVTFIPNE--SRNFVACRKSKRVLRVAQASSSSNNTEQNPTPS 1177
            M+GN       CP+ L     I     S NF+    S+   ++A+  +SS + E N   +
Sbjct: 1    MVGNS----LACPSVLSSSLIIKPHCSSSNFMPYLPSRPQKQLARIRASSADAEHNQASA 56

Query: 1176 SS-----------KTPFSIVLDVPKAIWRQTLRPLSDFGFGKKSIWEGGVGLFIVSGAVI 1030
            SS           K P ++VL+VP+ +WRQTLRPLSDFGFG++S+WEGGVGLF+VSGAV+
Sbjct: 57   SSSSSSSSSSNEKKNPLAVVLEVPQNLWRQTLRPLSDFGFGRRSVWEGGVGLFLVSGAVL 116

Query: 1029 FALSMVWLRGFYFRSRLRKYQAVFEFSQACGICTGTPVRIRGVTVGNVIRINPSLKSIEA 850
             ALS+ WLRGF  RS+ RKY AV EF+QACGICTGTPVRIRGVTVGNVI++NPSLKSIEA
Sbjct: 117  LALSLAWLRGFQLRSKFRKYTAVLEFAQACGICTGTPVRIRGVTVGNVIQVNPSLKSIEA 176

Query: 849  VVEVEDEKVIIPRNSLIEVNQSGLLMETLXXXXXXXXXXXXXXXXXXXDCVKEGLIVCDR 670
            VVEVED+K+IIPRNSLIEVNQSGLLMETL                   +CVKEGLIVCDR
Sbjct: 177  VVEVEDDKIIIPRNSLIEVNQSGLLMETLIDITPKDPIPSPSVGPLDAECVKEGLIVCDR 236

Query: 669  QKIRGQQGVSLDALVGIFTRLGREMEEIGVSRSYLLAERVASVIQEAKPLLAKIEEMAED 490
            QKI+GQQGVS+DALVGIFTRLGREMEEIGVS++Y LAERVA+VI+EAKPLL KI  MAED
Sbjct: 237  QKIKGQQGVSVDALVGIFTRLGREMEEIGVSKTYKLAERVAAVIEEAKPLLTKIHGMAED 296

Query: 489  VQPLLAEVRDSGLLKEVETLTKSLTEVADDLRKVNSSIMNPENTEQIRKSIYSFVFTLKN 310
            VQPLLAEVRDSGLLKEVE+LT+SLT+ ++DLR+ ++SIM PENTE I+KSIYS +FTLKN
Sbjct: 297  VQPLLAEVRDSGLLKEVESLTRSLTQASEDLRRAHTSIMTPENTELIQKSIYSLIFTLKN 356

Query: 309  IENISSDISSFTGDEATRRN 250
            IENISSDI  FTGDE TRRN
Sbjct: 357  IENISSDILGFTGDETTRRN 376


>emb|CAN71395.1| hypothetical protein VITISV_036125 [Vitis vinifera]
          Length = 408

 Score =  461 bits (1187), Expect = e-127
 Identities = 241/396 (60%), Positives = 294/396 (74%), Gaps = 29/396 (7%)
 Frame = -1

Query: 1350 MLGNQGVHVSTCPTALP-LVTFIPNESRNFVACR--KSKRVLRVAQASSSSNNTEQNPTP 1180
            M+GN  V V TCP AL   +  +P  S NF+ C   +S++ L + +A+S+     Q P+P
Sbjct: 1    MVGNPIVQVPTCPAALSSALATLPWGSGNFMPCLPPRSRKKLLLVRANSADAGHSQPPSP 60

Query: 1179 SSSKTPFSIVLDVPKAIWRQTLRPLSDFGFGKKSIWEGGVGLFIVSGAVIFALSMVWLRG 1000
            S +K P +++LD P+ +W+QTLRPLSDFGFG++SIWEGGVGLF+VSG V+  LS+ WLRG
Sbjct: 61   SKTKNPLAVILDFPRNVWKQTLRPLSDFGFGRRSIWEGGVGLFLVSGTVLLVLSLAWLRG 120

Query: 999  FYFRSRLRKYQAVFEFSQACGICTGTPVRIRGVTVGNVIRINPSLKSIEAVVEVEDEKVI 820
            F  RS+ RKY AVFEF+QACGIC GTPVRIRGVTVGNVI++NPSLKSIEAVVEVED+K+I
Sbjct: 121  FQLRSKFRKYLAVFEFTQACGICKGTPVRIRGVTVGNVIQVNPSLKSIEAVVEVEDDKII 180

Query: 819  IPRNSLIEVNQSGLLMETLXXXXXXXXXXXXXXXXXXXDCVKEGLIVCDRQKIRGQQGVS 640
            IP+NSLIEVNQSGLLMETL                   DC KEG+IVCDRQKIRG QGVS
Sbjct: 181  IPQNSLIEVNQSGLLMETLIDITPRDPLPTPSVGPLDPDCTKEGVIVCDRQKIRGYQGVS 240

Query: 639  LDALVGIFTRLGREMEEIGVSRSYLLAERVASVIQEAKPLLAK----------------- 511
            LDALVGIFTRLGRE+EEIG+++ Y +AER  S+I+EA+PLLAK                 
Sbjct: 241  LDALVGIFTRLGREVEEIGIAQGYSMAERALSIIEEARPLLAKINNQRGMQNRVGTSDVL 300

Query: 510  ---------IEEMAEDVQPLLAEVRDSGLLKEVETLTKSLTEVADDLRKVNSSIMNPENT 358
                     I+ MAEDVQPL+ E RD+GLLKEVE+LTKSL +  ++LR+V+SSI+ PENT
Sbjct: 301  FLVWDWTFPIKAMAEDVQPLVTEFRDTGLLKEVESLTKSLAQATEELRRVHSSILTPENT 360

Query: 357  EQIRKSIYSFVFTLKNIENISSDISSFTGDEATRRN 250
            E I+KSIY+ +FTLKNIENISSDI  FTGDEATRRN
Sbjct: 361  ELIQKSIYTLIFTLKNIENISSDILGFTGDEATRRN 396


>ref|XP_003543270.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like
            [Glycine max]
          Length = 383

 Score =  454 bits (1168), Expect = e-125
 Identities = 230/375 (61%), Positives = 289/375 (77%), Gaps = 8/375 (2%)
 Frame = -1

Query: 1350 MLGNQGVHVSTCPTALP--LVTFIPNESRNFVAC------RKSKRVLRVAQASSSSNNTE 1195
            M+ N  +H ST P+AL   LVT       +FV C      R  +++ R+   S++     
Sbjct: 1    MITNPSLHASTLPSALSSSLVTL----HGSFVNCMPCFPFRPQRKINRIRATSAADGGPV 56

Query: 1194 QNPTPSSSKTPFSIVLDVPKAIWRQTLRPLSDFGFGKKSIWEGGVGLFIVSGAVIFALSM 1015
            ++   S SK P ++VLD+P  +W+QT+RPLSDFGFG +SIWEGGVGLF+VSGAV+FALS+
Sbjct: 57   ESSPASGSKNPLAVVLDIPGTLWKQTMRPLSDFGFGGRSIWEGGVGLFLVSGAVLFALSL 116

Query: 1014 VWLRGFYFRSRLRKYQAVFEFSQACGICTGTPVRIRGVTVGNVIRINPSLKSIEAVVEVE 835
             WL+GF  RS+LRKY A FEF QACGICTGTPVRIRGVTVG+VI +NPSL+SIEA+VE+E
Sbjct: 117  AWLKGFQMRSKLRKYTATFEFDQACGICTGTPVRIRGVTVGDVIGVNPSLRSIEAIVEIE 176

Query: 834  DEKVIIPRNSLIEVNQSGLLMETLXXXXXXXXXXXXXXXXXXXDCVKEGLIVCDRQKIRG 655
            D+K IIPRNSL+EVNQSGLLMET+                   +C +E LIVCDR+KI+G
Sbjct: 177  DDKTIIPRNSLVEVNQSGLLMETIIDITPRDPIPTPSAGPLDQECSREALIVCDREKIKG 236

Query: 654  QQGVSLDALVGIFTRLGREMEEIGVSRSYLLAERVASVIQEAKPLLAKIEEMAEDVQPLL 475
             +GVSLD LVGIFTRLG+++E+IG++ SY LAER AS+I+EAKPLL K++ MAEDVQPLL
Sbjct: 237  IEGVSLDKLVGIFTRLGQDVEKIGIANSYSLAERAASIIEEAKPLLIKMKAMAEDVQPLL 296

Query: 474  AEVRDSGLLKEVETLTKSLTEVADDLRKVNSSIMNPENTEQIRKSIYSFVFTLKNIENIS 295
             EVRDSGLLKEVETLT+SLT+  +DLR+V+SSIM PENTE ++KSIY+ +FTLKNIEN+S
Sbjct: 297  TEVRDSGLLKEVETLTQSLTQATEDLRRVHSSIMTPENTELLQKSIYTLIFTLKNIENVS 356

Query: 294  SDISSFTGDEATRRN 250
            SDI  FTGDEATR++
Sbjct: 357  SDILGFTGDEATRKS 371


>ref|XP_002309784.1| predicted protein [Populus trichocarpa] gi|222852687|gb|EEE90234.1|
            predicted protein [Populus trichocarpa]
          Length = 370

 Score =  454 bits (1167), Expect = e-125
 Identities = 234/353 (66%), Positives = 279/353 (79%), Gaps = 3/353 (0%)
 Frame = -1

Query: 1299 LVTFIPNESRNFVAC---RKSKRVLRVAQASSSSNNTEQNPTPSSSKTPFSIVLDVPKAI 1129
            LV   P  S NF+ C   R  K++L V   S+ + +++  P+ S    P ++VL+VP  I
Sbjct: 7    LVNVSPGSS-NFLPCLRARPQKKLLGVRAMSADTGHSQPPPSSSEKMNPLAVVLEVPVNI 65

Query: 1128 WRQTLRPLSDFGFGKKSIWEGGVGLFIVSGAVIFALSMVWLRGFYFRSRLRKYQAVFEFS 949
            WRQTL+PL DFGFG++SIWEGGVGLF+VSGAV+ ALS+ WLRGF  RS+ RKY AV EF+
Sbjct: 66   WRQTLKPLGDFGFGRRSIWEGGVGLFLVSGAVLVALSLAWLRGFQLRSKFRKYLAVIEFA 125

Query: 948  QACGICTGTPVRIRGVTVGNVIRINPSLKSIEAVVEVEDEKVIIPRNSLIEVNQSGLLME 769
            QA GICTGT VRIRGVTVG V+R+NPSLKSIEAVVEVED+K+ IPRNSL+EVNQSGLLME
Sbjct: 126  QASGICTGTHVRIRGVTVGEVVRVNPSLKSIEAVVEVEDDKIFIPRNSLVEVNQSGLLME 185

Query: 768  TLXXXXXXXXXXXXXXXXXXXDCVKEGLIVCDRQKIRGQQGVSLDALVGIFTRLGREMEE 589
            T+                   +CVKEGLIVCDRQ+I+G QGVSLDALVGIFTR+GRE+EE
Sbjct: 186  TMIDITPRDPIPKPSVGPLDAECVKEGLIVCDRQRIKGIQGVSLDALVGIFTRIGREVEE 245

Query: 588  IGVSRSYLLAERVASVIQEAKPLLAKIEEMAEDVQPLLAEVRDSGLLKEVETLTKSLTEV 409
            IGV+ SY LAERVA+VI+EAKPLL KI+ M EDVQPLL+EVRDSGLLKEVE LT+SLT  
Sbjct: 246  IGVANSYALAERVAAVIEEAKPLLTKIKAMTEDVQPLLSEVRDSGLLKEVENLTRSLTLA 305

Query: 408  ADDLRKVNSSIMNPENTEQIRKSIYSFVFTLKNIENISSDISSFTGDEATRRN 250
            ++DLR+ ++SIM PEN+E I+KSIYS +FTLKNIENISSDI  FTGDEATRRN
Sbjct: 306  SEDLRRAHTSIMTPENSELIQKSIYSLIFTLKNIENISSDILGFTGDEATRRN 358


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