BLASTX nr result

ID: Coptis21_contig00005075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005075
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532074.1| PREDICTED: oxygen-evolving enhancer protein ...   379   e-103
gb|AFK47979.1| unknown [Lotus japonicus]                              377   e-102
gb|AFK44592.1| unknown [Lotus japonicus]                              377   e-102
gb|AFK39738.1| unknown [Lotus japonicus]                              376   e-102
ref|XP_002300858.1| hypothetical protein POPTRDRAFT_551203 [Popu...   375   e-102

>ref|XP_003532074.1| PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic-like
            [Glycine max]
          Length = 262

 Score =  379 bits (973), Expect = e-103
 Identities = 189/263 (71%), Positives = 218/263 (82%), Gaps = 1/263 (0%)
 Frame = +3

Query: 219  SSTACFLHHHALXXXXXXXXXXXXQVSCIKSNQLVVRAQKQS-NEDVEATPAVSRRLALS 395
            +ST CFLHHHAL             V   K N +V +AQKQ   E  + T  VSRRLAL+
Sbjct: 2    ASTQCFLHHHALTTPTRASSQRL--VVSTKPNHIVCKAQKQVVQEGEDTTNIVSRRLALT 59

Query: 396  VLIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYP 575
            VLIGAAA+G+KV+PADAAYGEAANVFGKPKTNT+++P   D FK+++P+KWNPSKEVEYP
Sbjct: 60   VLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEVEYP 119

Query: 576  GQVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGF 755
            GQVL+YEDNFDS SNV VM+T T KKSI DYGSPEEFL+QVDYLLGKQA+FG TD+EGGF
Sbjct: 120  GQVLRYEDNFDSTSNVAVMVTATDKKSITDYGSPEEFLSQVDYLLGKQAFFGQTDAEGGF 179

Query: 756  DPGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQA 935
            D  +VATANILE+ST VI+GKQYY L++LTRTADGDEGGKHQLI+ATV DGKLYICKAQA
Sbjct: 180  DSNAVATANILESSTPVIDGKQYYSLTVLTRTADGDEGGKHQLIAATVKDGKLYICKAQA 239

Query: 936  GDKRWFKGAKKFVEGTTSSFNVA 1004
            GDKRWFKGA++FVE T SSF+VA
Sbjct: 240  GDKRWFKGARRFVESTASSFSVA 262


>gb|AFK47979.1| unknown [Lotus japonicus]
          Length = 259

 Score =  377 bits (969), Expect = e-102
 Identities = 187/262 (71%), Positives = 219/262 (83%)
 Frame = +3

Query: 219  SSTACFLHHHALXXXXXXXXXXXXQVSCIKSNQLVVRAQKQSNEDVEATPAVSRRLALSV 398
            +ST CFLHHHAL            QV  IK NQ+V RAQKQ  +DVE    VSRRLAL++
Sbjct: 2    ASTQCFLHHHALTTPTRTSSQR--QVVSIKPNQIVCRAQKQ--QDVEDVSPVSRRLALTL 57

Query: 399  LIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYPG 578
            LIGAAA+G+KVSPADAAYGEAANVFGKPK+NT+++P   D FK+++PAKWNPSKE E+PG
Sbjct: 58   LIGAAAVGSKVSPADAAYGEAANVFGKPKSNTDFLPYNGDGFKLSIPAKWNPSKEREFPG 117

Query: 579  QVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGFD 758
            QVL+YEDNFD+ SNV+V+IT T KKSI DYGSPEEFL++VDYLLGKQA+FG TDSEGGFD
Sbjct: 118  QVLRYEDNFDATSNVSVIITATDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFD 177

Query: 759  PGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQAG 938
              +VA ANILE+S  V+ GKQYY +S+LTRTADGDEGGKHQ+I+ATV+DGKLYICKAQAG
Sbjct: 178  TNAVAVANILESSAPVVGGKQYYNVSVLTRTADGDEGGKHQIITATVNDGKLYICKAQAG 237

Query: 939  DKRWFKGAKKFVEGTTSSFNVA 1004
            DKRWFKGA+KFVE   SSF+VA
Sbjct: 238  DKRWFKGARKFVESAASSFSVA 259


>gb|AFK44592.1| unknown [Lotus japonicus]
          Length = 259

 Score =  377 bits (969), Expect = e-102
 Identities = 187/262 (71%), Positives = 219/262 (83%)
 Frame = +3

Query: 219  SSTACFLHHHALXXXXXXXXXXXXQVSCIKSNQLVVRAQKQSNEDVEATPAVSRRLALSV 398
            +ST CFLHHHAL            QV  IK NQ+V RAQKQ  +DVE    VSRRLAL++
Sbjct: 2    ASTQCFLHHHALTTPTRTSSQR--QVVSIKPNQIVCRAQKQ--QDVEDVSPVSRRLALTL 57

Query: 399  LIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYPG 578
            LIGAAA+G+KVSPADAAYGEAANVFGKPK+NT+++P   D FK+++PAKWNPSKE E+PG
Sbjct: 58   LIGAAAVGSKVSPADAAYGEAANVFGKPKSNTDFLPYNGDGFKLSIPAKWNPSKEREFPG 117

Query: 579  QVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGFD 758
            QVL+YEDNFD+ SNV+V+IT T KKSI DYGSPEEFL++VDYLLGKQA+FG TDSEGGFD
Sbjct: 118  QVLRYEDNFDATSNVSVIITATDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFD 177

Query: 759  PGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQAG 938
              +VA ANILE+S  V+ GKQYY +S+LTRTADGDEGGKHQ+I+ATV+DGKLYICKAQAG
Sbjct: 178  ANAVAVANILESSAPVVGGKQYYNVSVLTRTADGDEGGKHQIITATVNDGKLYICKAQAG 237

Query: 939  DKRWFKGAKKFVEGTTSSFNVA 1004
            DKRWFKGA+KFVE   SSF+VA
Sbjct: 238  DKRWFKGARKFVESAASSFSVA 259


>gb|AFK39738.1| unknown [Lotus japonicus]
          Length = 259

 Score =  376 bits (965), Expect = e-102
 Identities = 187/262 (71%), Positives = 219/262 (83%)
 Frame = +3

Query: 219  SSTACFLHHHALXXXXXXXXXXXXQVSCIKSNQLVVRAQKQSNEDVEATPAVSRRLALSV 398
            +ST CFLHHHAL            QV  IKSNQ+V RAQKQ  +DVE    VSRRLAL++
Sbjct: 2    ASTQCFLHHHALTTPTRTSSQR--QVVSIKSNQIVCRAQKQ--QDVEDVSPVSRRLALTL 57

Query: 399  LIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYPG 578
            LIGAAA+G+KVSPADAAYGEAANVFGKPK+NT+++P   D FK+++PAKWNPSKE E+PG
Sbjct: 58   LIGAAAVGSKVSPADAAYGEAANVFGKPKSNTDFLPYNGDGFKLSIPAKWNPSKEREFPG 117

Query: 579  QVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGFD 758
            QVL+YEDNFD+ SNV+V+IT T KKSI DYGSPEEFL++VDYLLGKQA+FG T SEGGFD
Sbjct: 118  QVLRYEDNFDATSNVSVIITATDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTYSEGGFD 177

Query: 759  PGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQAG 938
              +VA ANILE+S  V+ GKQYY +S+LTRTADGDEGGKHQ+I+ATV+DGKLYICKAQAG
Sbjct: 178  TNAVAVANILESSAPVVGGKQYYNVSVLTRTADGDEGGKHQIITATVNDGKLYICKAQAG 237

Query: 939  DKRWFKGAKKFVEGTTSSFNVA 1004
            DKRWFKGA+KFVE   SSF+VA
Sbjct: 238  DKRWFKGARKFVESAASSFSVA 259


>ref|XP_002300858.1| hypothetical protein POPTRDRAFT_551203 [Populus trichocarpa]
            gi|118487448|gb|ABK95552.1| unknown [Populus trichocarpa]
            gi|222842584|gb|EEE80131.1| hypothetical protein
            POPTRDRAFT_551203 [Populus trichocarpa]
          Length = 262

 Score =  375 bits (964), Expect = e-102
 Identities = 188/262 (71%), Positives = 219/262 (83%)
 Frame = +3

Query: 219  SSTACFLHHHALXXXXXXXXXXXXQVSCIKSNQLVVRAQKQSNEDVEATPAVSRRLALSV 398
            +STACFLHHHAL            QV  +K  QLV RAQKQ+ ++ E    VSRRLAL+V
Sbjct: 2    ASTACFLHHHALTTPARSTSSSQRQVVNLKPAQLVCRAQKQAVQE-EDDGVVSRRLALTV 60

Query: 399  LIGAAAIGTKVSPADAAYGEAANVFGKPKTNTEYIPIIRDNFKITVPAKWNPSKEVEYPG 578
            LIGAAA+G+KV+PADAAYGE+AN+FGKPKTNT+++P   D FK++VPAKWNPSKE E+PG
Sbjct: 61   LIGAAALGSKVAPADAAYGESANIFGKPKTNTDFLPYNGDGFKLSVPAKWNPSKEREFPG 120

Query: 579  QVLKYEDNFDSNSNVNVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYFGATDSEGGFD 758
            QVL+YEDNFD+ SN++VM+TPT  KSIADYGSPEEFL++VDYLLGKQ+   AT SEGGFD
Sbjct: 121  QVLRYEDNFDATSNLSVMVTPTDTKSIADYGSPEEFLSKVDYLLGKQSSLFATSSEGGFD 180

Query: 759  PGSVATANILETSTQVINGKQYYKLSILTRTADGDEGGKHQLISATVSDGKLYICKAQAG 938
              +VATANILETST VI+GKQYY LS+LTRTADGDEGGKHQLI+ATV DGKLYICKAQAG
Sbjct: 181  TNTVATANILETSTPVIDGKQYYFLSVLTRTADGDEGGKHQLITATVKDGKLYICKAQAG 240

Query: 939  DKRWFKGAKKFVEGTTSSFNVA 1004
            DKRWFKGA+KFVE   SSF+VA
Sbjct: 241  DKRWFKGARKFVESAASSFSVA 262


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