BLASTX nr result

ID: Coptis21_contig00005053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005053
         (1576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248...   440   e-121
emb|CBI22898.3| unnamed protein product [Vitis vinifera]              414   e-113
emb|CBI36946.3| unnamed protein product [Vitis vinifera]              388   e-105
ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248...   388   e-105
ref|XP_003594776.1| Bromodomain and WD repeat-containing protein...   368   3e-99

>ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248159 [Vitis vinifera]
          Length = 1756

 Score =  440 bits (1131), Expect = e-121
 Identities = 224/421 (53%), Positives = 296/421 (70%), Gaps = 6/421 (1%)
 Frame = -3

Query: 1529 SEVDGDNHDSNPRMGFLEASVDG-RRTRSMGMRDDTREQYMDNKIFKARESHGSVETSND 1353
            S  +  NH+ +  M F EA+ DG RRTRSMG++  TR+  +     K R  HGS +T   
Sbjct: 1337 STSNASNHNLDSGMDFHEATTDGARRTRSMGLKATTRDPDVTCSNLKLRLGHGSEDTLKS 1396

Query: 1352 FDKFSLNSREQQLCEPWRSSAVPSVGLRSARTKRVNYG--DSHITPRDKRKLPHLMKNVS 1179
             DKFS+N  ++  CE W SS+  +VGLRSAR +R +Y   D+  +P ++RK     K VS
Sbjct: 1397 VDKFSVNRSDELPCEEWMSSSRMTVGLRSARNRRASYHVRDTSPSPMERRKPHQSSKKVS 1456

Query: 1178 WLMLSEHDVGLRYIPQKGDNVVYIRQGHQQFGECHSSSDI--WGPLWEKLRAVESCKVTG 1005
            WLMLS H V  RYIPQ GD VVY+RQGHQ++     S +   W  +   +RAVE CKV G
Sbjct: 1457 WLMLSMH-VEPRYIPQLGDEVVYLRQGHQEYITYSGSHEAGPWTSVKGIIRAVEFCKVEG 1515

Query: 1004 LSYSTYPGSGESCCKISLEFVDPSCCLSGKTFKLTLPELNDFPDFLVERTLYDSSIKRNW 825
            L YS + GSG+SCCK++L+FVDP+  + GKTFKLTLPE+  FPDFLVERT YD++I+RNW
Sbjct: 1516 LEYSPFAGSGDSCCKMTLQFVDPTSHVFGKTFKLTLPEVTSFPDFLVERTRYDAAIQRNW 1575

Query: 824  TTRDKCVVWWKNE-QGGGSWWPGRIVSVKPKSLEFPDCPWEKYSIRYKNDSGEEFKHCPW 648
            T+RDKC VWWKNE +  GSWW GRI+SVK +S EFPD PW++Y IRY+++  E   H PW
Sbjct: 1576 TSRDKCRVWWKNEGEEDGSWWDGRILSVKARSPEFPDSPWDRYVIRYRSEPTETHLHSPW 1635

Query: 647  ELLDPDANWEHPCIEEQSRAKLVSLIAKLEHSGDRSRDRYGIKKLTQISWKQDFLNRFPV 468
            EL D    WE P I+++SR KL+S +AKLE SGD+ +D YGI+KL Q+S K +FLNRFPV
Sbjct: 1636 ELYDIGTQWEQPHIDDESRNKLLSSLAKLEQSGDKPQDYYGIQKLKQVSQKSNFLNRFPV 1695

Query: 467  PLSFDVIHSRLVNKYYRNLESVEHDFMVMISNARSYVGENAEFSMKMQKLSKLLDETMST 288
            PLS +VI SRL N+YYR++E+V+HD  VM+SNA +Y  +NAE SMK+++LS+     +S+
Sbjct: 1696 PLSLEVIQSRLKNQYYRSMEAVKHDVKVMLSNAETYFVKNAELSMKVRRLSEWFTRMLSS 1755

Query: 287  L 285
            +
Sbjct: 1756 I 1756


>emb|CBI22898.3| unnamed protein product [Vitis vinifera]
          Length = 1569

 Score =  414 bits (1064), Expect = e-113
 Identities = 212/407 (52%), Positives = 278/407 (68%), Gaps = 5/407 (1%)
 Frame = -3

Query: 1490 MGFLEASVDGRRTRSMGMRDDTREQYMDNKIFKARESHGSVETSNDFDKFSLNSREQQLC 1311
            M F EA+ DG R   +G                    HGS +T    DKFS+N  ++  C
Sbjct: 1184 MDFHEATTDGARRTRLG--------------------HGSEDTLKSVDKFSVNRSDELPC 1223

Query: 1310 EPWRSSAVPSVGLRSARTKRVNYG--DSHITPRDKRKLPHLMKNVSWLMLSEHDVGLRYI 1137
            E W SS+  +VGLRSAR +R +Y   D+  +P ++RK     K VSWLMLS H V  RYI
Sbjct: 1224 EEWMSSSRMTVGLRSARNRRASYHVRDTSPSPMERRKPHQSSKKVSWLMLSMH-VEPRYI 1282

Query: 1136 PQKGDNVVYIRQGHQQFGECHSSSDI--WGPLWEKLRAVESCKVTGLSYSTYPGSGESCC 963
            PQ GD VVY+RQGHQ++     S +   W  +   +RAVE CKV GL YS + GSG+SCC
Sbjct: 1283 PQLGDEVVYLRQGHQEYITYSGSHEAGPWTSVKGIIRAVEFCKVEGLEYSPFAGSGDSCC 1342

Query: 962  KISLEFVDPSCCLSGKTFKLTLPELNDFPDFLVERTLYDSSIKRNWTTRDKCVVWWKNE- 786
            K++L+FVDP+  + GKTFKLTLPE+  FPDFLVERT YD++I+RNWT+RDKC VWWKNE 
Sbjct: 1343 KMTLQFVDPTSHVFGKTFKLTLPEVTSFPDFLVERTRYDAAIQRNWTSRDKCRVWWKNEG 1402

Query: 785  QGGGSWWPGRIVSVKPKSLEFPDCPWEKYSIRYKNDSGEEFKHCPWELLDPDANWEHPCI 606
            +  GSWW GRI+SVK +S EFPD PW++Y IRY+++  E   H PWEL D    WE P I
Sbjct: 1403 EEDGSWWDGRILSVKARSPEFPDSPWDRYVIRYRSEPTETHLHSPWELYDIGTQWEQPHI 1462

Query: 605  EEQSRAKLVSLIAKLEHSGDRSRDRYGIKKLTQISWKQDFLNRFPVPLSFDVIHSRLVNK 426
            +++SR KL+S +AKLE SGD+ +D YGI+KL Q+S K +FLNRFPVPLS +VI SRL N+
Sbjct: 1463 DDESRNKLLSSLAKLEQSGDKPQDYYGIQKLKQVSQKSNFLNRFPVPLSLEVIQSRLKNQ 1522

Query: 425  YYRNLESVEHDFMVMISNARSYVGENAEFSMKMQKLSKLLDETMSTL 285
            YYR++E+V+HD  VM+SNA +Y  +NAE SMK+++LS+     +S++
Sbjct: 1523 YYRSMEAVKHDVKVMLSNAETYFVKNAELSMKVRRLSEWFTRMLSSI 1569


>emb|CBI36946.3| unnamed protein product [Vitis vinifera]
          Length = 1549

 Score =  388 bits (996), Expect = e-105
 Identities = 217/429 (50%), Positives = 282/429 (65%), Gaps = 8/429 (1%)
 Frame = -3

Query: 1547 SKAKNYSEVDGDNHDSNPRMGFLEASVDG-RRTRSMGMRDDTREQYMDNKI---FKARES 1380
            S A NY      N+DS   + F EA+ D   RTRSM +RD T ++   N +   FK RE 
Sbjct: 1140 SNAGNY------NYDSG--IDFHEATTDAVHRTRSM-VRDTTSQE--PNNVMSRFKVRE- 1187

Query: 1379 HGSVETSNDFDKFSLNSREQQLCEPWRSSAVPSVGLRSARTKRVNYGDSHITPRDKRKLP 1200
                ETS + + +S  +R+Q   E W SS+   V  RS R +R +Y D++++P   R   
Sbjct: 1188 ----ETSKNAENYSKKTRDQLQSEEWMSSSRMRVRSRSTRYRRGDY-DNYLSPSAGRISN 1242

Query: 1199 HLMKNVSWLMLSEHDVGLRYIPQKGDNVVYIRQGHQQFGE---CHSSSDIWGPLWEKLRA 1029
               + VSWLMLSEH+ G RYIPQ+GD VVY+RQGHQ++ E     S    W      +RA
Sbjct: 1243 FSGRKVSWLMLSEHEEGYRYIPQQGDEVVYLRQGHQEYIEKLNLRSEVGPWRSPKTNIRA 1302

Query: 1028 VESCKVTGLSYSTYPGSGESCCKISLEFVDPSCCLSGKTFKLTLPELNDFPDFLVERTLY 849
            VE C V  L Y++  GSG+SCCKI+L+F DP   + G+TFKLTLPEL +F DF+VE+T Y
Sbjct: 1303 VEICSVEDLVYASLAGSGDSCCKITLKFTDPLSSVFGRTFKLTLPELINFSDFVVEKTRY 1362

Query: 848  DSSIKRNWTTRDKCVVWWKN-EQGGGSWWPGRIVSVKPKSLEFPDCPWEKYSIRYKNDSG 672
            D++I RNWT RDKC+VWW+N E GGGSWW GRI++V+ KS EFPD PWE+Y ++YK D+ 
Sbjct: 1363 DAAIGRNWTHRDKCLVWWRNGEDGGGSWWEGRILAVEAKSREFPDSPWERYVVKYKGDA- 1421

Query: 671  EEFKHCPWELLDPDANWEHPCIEEQSRAKLVSLIAKLEHSGDRSRDRYGIKKLTQISWKQ 492
            E   H PWEL DPD  WE P I+ + R KL+S  AKLE S  + +D YGI+K  Q++ K 
Sbjct: 1422 ENNLHSPWELHDPDIQWEQPQIDFEIRDKLLSSFAKLE-SAHKIQDYYGIQKFNQVAQKL 1480

Query: 491  DFLNRFPVPLSFDVIHSRLVNKYYRNLESVEHDFMVMISNARSYVGENAEFSMKMQKLSK 312
            DFLNRFPVPL  ++I +RL N YYR LE+V+HD MVM+SNA+SY G NAE S KM++LS 
Sbjct: 1481 DFLNRFPVPLYPELIQARLENNYYRTLEAVKHDIMVMLSNAQSYFGRNAELSSKMKRLSD 1540

Query: 311  LLDETMSTL 285
                T+S L
Sbjct: 1541 WFTRTLSKL 1549


>ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248563 [Vitis vinifera]
          Length = 1766

 Score =  388 bits (996), Expect = e-105
 Identities = 217/429 (50%), Positives = 282/429 (65%), Gaps = 8/429 (1%)
 Frame = -3

Query: 1547 SKAKNYSEVDGDNHDSNPRMGFLEASVDG-RRTRSMGMRDDTREQYMDNKI---FKARES 1380
            S A NY      N+DS   + F EA+ D   RTRSM +RD T ++   N +   FK RE 
Sbjct: 1357 SNAGNY------NYDSG--IDFHEATTDAVHRTRSM-VRDTTSQE--PNNVMSRFKVRE- 1404

Query: 1379 HGSVETSNDFDKFSLNSREQQLCEPWRSSAVPSVGLRSARTKRVNYGDSHITPRDKRKLP 1200
                ETS + + +S  +R+Q   E W SS+   V  RS R +R +Y D++++P   R   
Sbjct: 1405 ----ETSKNAENYSKKTRDQLQSEEWMSSSRMRVRSRSTRYRRGDY-DNYLSPSAGRISN 1459

Query: 1199 HLMKNVSWLMLSEHDVGLRYIPQKGDNVVYIRQGHQQFGE---CHSSSDIWGPLWEKLRA 1029
               + VSWLMLSEH+ G RYIPQ+GD VVY+RQGHQ++ E     S    W      +RA
Sbjct: 1460 FSGRKVSWLMLSEHEEGYRYIPQQGDEVVYLRQGHQEYIEKLNLRSEVGPWRSPKTNIRA 1519

Query: 1028 VESCKVTGLSYSTYPGSGESCCKISLEFVDPSCCLSGKTFKLTLPELNDFPDFLVERTLY 849
            VE C V  L Y++  GSG+SCCKI+L+F DP   + G+TFKLTLPEL +F DF+VE+T Y
Sbjct: 1520 VEICSVEDLVYASLAGSGDSCCKITLKFTDPLSSVFGRTFKLTLPELINFSDFVVEKTRY 1579

Query: 848  DSSIKRNWTTRDKCVVWWKN-EQGGGSWWPGRIVSVKPKSLEFPDCPWEKYSIRYKNDSG 672
            D++I RNWT RDKC+VWW+N E GGGSWW GRI++V+ KS EFPD PWE+Y ++YK D+ 
Sbjct: 1580 DAAIGRNWTHRDKCLVWWRNGEDGGGSWWEGRILAVEAKSREFPDSPWERYVVKYKGDA- 1638

Query: 671  EEFKHCPWELLDPDANWEHPCIEEQSRAKLVSLIAKLEHSGDRSRDRYGIKKLTQISWKQ 492
            E   H PWEL DPD  WE P I+ + R KL+S  AKLE S  + +D YGI+K  Q++ K 
Sbjct: 1639 ENNLHSPWELHDPDIQWEQPQIDFEIRDKLLSSFAKLE-SAHKIQDYYGIQKFNQVAQKL 1697

Query: 491  DFLNRFPVPLSFDVIHSRLVNKYYRNLESVEHDFMVMISNARSYVGENAEFSMKMQKLSK 312
            DFLNRFPVPL  ++I +RL N YYR LE+V+HD MVM+SNA+SY G NAE S KM++LS 
Sbjct: 1698 DFLNRFPVPLYPELIQARLENNYYRTLEAVKHDIMVMLSNAQSYFGRNAELSSKMKRLSD 1757

Query: 311  LLDETMSTL 285
                T+S L
Sbjct: 1758 WFTRTLSKL 1766


>ref|XP_003594776.1| Bromodomain and WD repeat-containing protein [Medicago truncatula]
            gi|355483824|gb|AES65027.1| Bromodomain and WD
            repeat-containing protein [Medicago truncatula]
          Length = 1844

 Score =  368 bits (944), Expect = 3e-99
 Identities = 177/341 (51%), Positives = 238/341 (69%), Gaps = 3/341 (0%)
 Frame = -3

Query: 1298 SSAVPSVGLRSARTKRVNYGDSHITPRDKRKLPHLMKNVSWLMLSEHDVGLRYIPQKGDN 1119
            SS+  +VGLRS R +R  Y     +P ++RK        SWL+LS H+ G RYIPQ+GD 
Sbjct: 1504 SSSKLTVGLRSTRNRRSTYNIRETSPVNRRKSLQSAVKGSWLLLSTHEEGCRYIPQQGDE 1563

Query: 1118 VVYIRQGHQQFGECHSS--SDIWGPLWEKLRAVESCKVTGLSYSTYPGSGESCCKISLEF 945
            VVY+RQGHQ++ E      S  W  L E LRAVE C+V  L YS  PGSG+SCCK++LEF
Sbjct: 1564 VVYLRQGHQEYIEYSRKRESGPWVSLKEHLRAVEYCRVQSLEYSHVPGSGDSCCKMTLEF 1623

Query: 944  VDPSCCLSGKTFKLTLPELNDFPDFLVERTLYDSSIKRNWTTRDKCVVWWKNEQGG-GSW 768
            +DP+  + GKTFKLTLPE+  FPDFLVERT +D++I+RNWT RDKC VWWKNE    G+W
Sbjct: 1624 LDPNSSVVGKTFKLTLPEVTGFPDFLVERTRFDAAIQRNWTRRDKCRVWWKNEDNSSGNW 1683

Query: 767  WPGRIVSVKPKSLEFPDCPWEKYSIRYKNDSGEEFKHCPWELLDPDANWEHPCIEEQSRA 588
            W GRI  VK KS EFPD PWE+YS+RYK+D  +E  H PWEL D D  WE P I++ +R 
Sbjct: 1684 WEGRIQFVKAKSSEFPDSPWERYSVRYKSDLSDEHLHSPWELFDADTQWEQPHIDDHTRN 1743

Query: 587  KLVSLIAKLEHSGDRSRDRYGIKKLTQISWKQDFLNRFPVPLSFDVIHSRLVNKYYRNLE 408
            KL+S + K++ SG+  +DRYG+ +L +IS K  F NRFPVPLS ++I SRL N YYR+L+
Sbjct: 1744 KLLSALTKVQQSGNTVQDRYGLHELEKISNKSKFTNRFPVPLSIELIQSRLENSYYRSLD 1803

Query: 407  SVEHDFMVMISNARSYVGENAEFSMKMQKLSKLLDETMSTL 285
            +++HD  ++++NA S+  ++   + K++ LS+    T+S+L
Sbjct: 1804 ALKHDVSILLTNANSFFEKDLVMTTKIKHLSEWFTRTLSSL 1844


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