BLASTX nr result
ID: Coptis21_contig00005051
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005051 (611 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera] 251 7e-65 ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vini... 251 9e-65 ref|XP_002303639.1| predicted protein [Populus trichocarpa] gi|1... 238 5e-61 ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max] 238 6e-61 ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max] 235 4e-60 >emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera] Length = 325 Score = 251 bits (641), Expect = 7e-65 Identities = 121/181 (66%), Positives = 138/181 (76%) Frame = +2 Query: 68 MEKSLINLDKGTNCSAWNYCGQRLATGSTDGSLSIFDSIDPNXXXXXXXXXXXXXEAGIL 247 MEKSL+ LD GT CS+WNY G+RLATGS DG+L+IFDSIDP E I+ Sbjct: 1 MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSIV 60 Query: 248 KVVWVPPEYGDAVACICADGTLLLWEEVGEDSQSIKWIKCKHFENNESKALDLQFGASFT 427 KVVWVPPEYGDAV CICADGTL LWEEV ED+Q ++W CK F +N +K LD+QFG S T Sbjct: 61 KVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPT 120 Query: 428 SLKLVAAYSNGFVKVYELQDPLDLKKWQLQAEFQNVIDSVPMMGKPSCLSASISWNPQRG 607 SLK+V+AYS+G VKVYEL DPL+LK WQLQAEFQN DSV GK CLSAS+SWNPQRG Sbjct: 121 SLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRG 180 Query: 608 E 610 E Sbjct: 181 E 181 >ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vinifera] gi|297742315|emb|CBI34464.3| unnamed protein product [Vitis vinifera] Length = 325 Score = 251 bits (640), Expect = 9e-65 Identities = 120/181 (66%), Positives = 138/181 (76%) Frame = +2 Query: 68 MEKSLINLDKGTNCSAWNYCGQRLATGSTDGSLSIFDSIDPNXXXXXXXXXXXXXEAGIL 247 MEKSL+ LD GT CS+WNY G+RLATGS DG+L+IFDSIDP E ++ Sbjct: 1 MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSVV 60 Query: 248 KVVWVPPEYGDAVACICADGTLLLWEEVGEDSQSIKWIKCKHFENNESKALDLQFGASFT 427 KVVWVPPEYGDAV CICADGTL LWEEV ED+Q ++W CK F +N +K LD+QFG S T Sbjct: 61 KVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPT 120 Query: 428 SLKLVAAYSNGFVKVYELQDPLDLKKWQLQAEFQNVIDSVPMMGKPSCLSASISWNPQRG 607 SLK+V+AYS+G VKVYEL DPL+LK WQLQAEFQN DSV GK CLSAS+SWNPQRG Sbjct: 121 SLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRG 180 Query: 608 E 610 E Sbjct: 181 E 181 >ref|XP_002303639.1| predicted protein [Populus trichocarpa] gi|118483516|gb|ABK93656.1| unknown [Populus trichocarpa] gi|222841071|gb|EEE78618.1| predicted protein [Populus trichocarpa] Length = 325 Score = 238 bits (608), Expect = 5e-61 Identities = 115/181 (63%), Positives = 130/181 (71%) Frame = +2 Query: 68 MEKSLINLDKGTNCSAWNYCGQRLATGSTDGSLSIFDSIDPNXXXXXXXXXXXXXEAGIL 247 MEKS+ LDKGT C++WNYCGQRLATGS +G LSIFDS DP E GI+ Sbjct: 1 MEKSVATLDKGTTCTSWNYCGQRLATGSFNGFLSIFDSPDPASSSFTATSNIRIHEGGIV 60 Query: 248 KVVWVPPEYGDAVACICADGTLLLWEEVGEDSQSIKWIKCKHFENNESKALDLQFGASFT 427 K+VW+PPEYGDAVACIC DG+L LWEE+ ED ++W CK F SK LD QFG T Sbjct: 61 KIVWIPPEYGDAVACICGDGSLSLWEEIAEDGLPLQWKLCKIFHCKGSKVLDAQFGVIRT 120 Query: 428 SLKLVAAYSNGFVKVYELQDPLDLKKWQLQAEFQNVIDSVPMMGKPSCLSASISWNPQRG 607 SLK+V AYS+G VKVYEL +P +LK WQLQAE QNVIDSV GK SC SASISWNPQR Sbjct: 121 SLKMVVAYSDGHVKVYELLNPFELKNWQLQAEIQNVIDSVSTFGKASCFSASISWNPQRN 180 Query: 608 E 610 E Sbjct: 181 E 181 >ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max] Length = 326 Score = 238 bits (607), Expect = 6e-61 Identities = 115/181 (63%), Positives = 135/181 (74%), Gaps = 1/181 (0%) Frame = +2 Query: 68 MEKSLINLDKGTNCSAWNYCGQRLATGSTDGSLSIFDSIDP-NXXXXXXXXXXXXXEAGI 244 M K L+ LD GT C++WNY G RLA GS DG+LSIFDS DP + E I Sbjct: 1 MAKELLTLDNGTTCTSWNYSGTRLAAGSVDGTLSIFDSRDPPSSSSLHSTFKSRVLEGNI 60 Query: 245 LKVVWVPPEYGDAVACICADGTLLLWEEVGEDSQSIKWIKCKHFENNESKALDLQFGASF 424 +K+VW+PPEYGDAVACI ADG + LWEEV EDSQS++W CK F N+ SK LD QFG S Sbjct: 61 VKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDAQFGISL 120 Query: 425 TSLKLVAAYSNGFVKVYELQDPLDLKKWQLQAEFQNVIDSVPMMGKPSCLSASISWNPQR 604 TSLK+VAAYS+G V+V+EL DPL+L+ WQLQAEFQNVI+SV GK SCLSASISWNPQ+ Sbjct: 121 TSLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQK 180 Query: 605 G 607 G Sbjct: 181 G 181 >ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max] Length = 326 Score = 235 bits (600), Expect = 4e-60 Identities = 113/181 (62%), Positives = 135/181 (74%), Gaps = 1/181 (0%) Frame = +2 Query: 68 MEKSLINLDKGTNCSAWNYCGQRLATGSTDGSLSIFDSIDP-NXXXXXXXXXXXXXEAGI 244 M K L+ LD GT C++WNY G RLA GS DG+LSIFDS +P + E I Sbjct: 1 MAKELLTLDNGTTCTSWNYSGTRLAAGSADGTLSIFDSREPPSSSSLRSTFKSRVLEGNI 60 Query: 245 LKVVWVPPEYGDAVACICADGTLLLWEEVGEDSQSIKWIKCKHFENNESKALDLQFGASF 424 +K+VW+PPEYGDAVACI ADG + LWEEV EDSQS++W CK F N+ SK LD+QFG S Sbjct: 61 VKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDVQFGISL 120 Query: 425 TSLKLVAAYSNGFVKVYELQDPLDLKKWQLQAEFQNVIDSVPMMGKPSCLSASISWNPQR 604 SLK+VAAYS+G V+V+EL DPL+L+ WQLQAEFQNVI+SV GK SCLSASISWNPQ+ Sbjct: 121 ASLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQK 180 Query: 605 G 607 G Sbjct: 181 G 181