BLASTX nr result

ID: Coptis21_contig00005042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005042
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267313.1| PREDICTED: uncharacterized protein LOC100252...   311   2e-82
emb|CAN73547.1| hypothetical protein VITISV_038181 [Vitis vinifera]   306   1e-80
gb|ACF86628.1| unknown [Zea mays] gi|195634795|gb|ACG36866.1| BS...   300   7e-79
ref|XP_002514599.1| conserved hypothetical protein [Ricinus comm...   294   4e-77
ref|XP_002454354.1| hypothetical protein SORBIDRAFT_04g029290 [S...   292   2e-76

>ref|XP_002267313.1| PREDICTED: uncharacterized protein LOC100252678 [Vitis vinifera]
          Length = 302

 Score =  311 bits (798), Expect = 2e-82
 Identities = 174/280 (62%), Positives = 208/280 (74%), Gaps = 13/280 (4%)
 Frame = -1

Query: 1337 MDFWARARNFAEETAKRSTELT----------KEAAKRSQEFTINGSSKISDIVSETAKK 1188
            MD W +AR+FAEE AKRS ELT           E AKRS+E     + +  +I SETAK+
Sbjct: 1    MDLWLKARSFAEEAAKRSQELTIGTTKISDIVSETAKRSKEIASETAKRSKEIASETAKR 60

Query: 1187 SKEIAAEATKKADQIKIEALKRADQIKSLAENISAPQIPINAAISLVDSSANSGPSDAEL 1008
            SKEIA EA+K+ADQIKIEALK AD+IK LA+ IS            V SS  +  SD  L
Sbjct: 61   SKEIAVEASKRADQIKIEALKGADKIKLLADGISPS----------VRSSPETEASD--L 108

Query: 1007 DMFGVTDDLREFVKGITHNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQERHATLVLLTV 828
            + FGVTD+L EFVKGIT NTFQDFP++D  E+S++PTVSNVRQDLT+WQERHA LVL TV
Sbjct: 109  EKFGVTDELGEFVKGITMNTFQDFPLEDDTEMSDVPTVSNVRQDLTQWQERHANLVLSTV 168

Query: 827  KEISSLRYQLCPRHMKERKFWKIYFILVNTHVAPYEKRYMEE-KLKSAEKEKDDELKENP 651
            KE+S LRY+LCPR MKERKFW+IYFILVN+HVAPYEK+YME+ K KSAE+EK+D +KE P
Sbjct: 169  KEVSKLRYELCPRFMKERKFWRIYFILVNSHVAPYEKQYMEDVKQKSAEEEKEDNVKEIP 228

Query: 650  PVGTSSKPESTPTIR-PKTSTSSA-EQDLDVFLLGDLGSS 537
              GT+ K E+  + +  +TSTSSA EQDLDVFLLGDLG S
Sbjct: 229  KAGTTVKVEAKESNKQSRTSTSSATEQDLDVFLLGDLGDS 268


>emb|CAN73547.1| hypothetical protein VITISV_038181 [Vitis vinifera]
          Length = 314

 Score =  306 bits (783), Expect = 1e-80
 Identities = 175/292 (59%), Positives = 209/292 (71%), Gaps = 25/292 (8%)
 Frame = -1

Query: 1337 MDFWARARNFAEETAKRSTELT----------KEAAKRSQEFTINGSSKISDIVSETAKK 1188
            MD W +AR+FAEE AKRS ELT           E AKRS+E     + +  +I SETAK+
Sbjct: 1    MDLWLKARSFAEEAAKRSQELTIGTTKISDIVSETAKRSKEIASETAKRSKEIASETAKR 60

Query: 1187 SKEIAAEATKKADQIKIEALKRADQIKSLAENISAPQIPINAAISLVDSSANSGPSDAEL 1008
            SKEIA EA+K+ADQIKIEALK AD+IK LA+ IS            V SS  +  SD  L
Sbjct: 61   SKEIAVEASKRADQIKIEALKGADKIKLLADGISPS----------VRSSPETEASD--L 108

Query: 1007 DMFGVTDDLREFVKGITHNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQERHATLVLLTV 828
            + FGVTD+LREFVKGIT NTFQDFP++D  E+S++PTVSNVRQDLT+WQERHA LVL TV
Sbjct: 109  EKFGVTDELREFVKGITMNTFQDFPLEDDTEMSDVPTVSNVRQDLTQWQERHANLVLSTV 168

Query: 827  KEISSLRYQLCPRHMKERKFWKIYFILVNTHVAP------------YEKRYMEE-KLKSA 687
            KE+S LRY+LCPR MKERKFW+IYFILVN+HVAP            YEK+YME+ K KSA
Sbjct: 169  KEVSKLRYELCPRFMKERKFWRIYFILVNSHVAPFSNRSYXMVSIRYEKQYMEDVKXKSA 228

Query: 686  EKEKDDELKENPPVGTSSKPESTPTIR-PKTSTSSA-EQDLDVFLLGDLGSS 537
            E+EK+D +KE P  GT+ K E+  + +  +TSTSSA EQDLDVFLLGDLG S
Sbjct: 229  EEEKEDNVKEIPKAGTTVKVEAKESNKQSRTSTSSATEQDLDVFLLGDLGDS 280


>gb|ACF86628.1| unknown [Zea mays] gi|195634795|gb|ACG36866.1| BSD domain containing
            protein [Zea mays] gi|413923791|gb|AFW63723.1| BSD domain
            containing protein [Zea mays]
          Length = 300

 Score =  300 bits (768), Expect = 7e-79
 Identities = 154/266 (57%), Positives = 194/266 (72%)
 Frame = -1

Query: 1337 MDFWARARNFAEETAKRSTELTKEAAKRSQEFTINGSSKISDIVSETAKKSKEIAAEATK 1158
            MD W RAR FA E AKRS EL+ EAAKRS       + K  +I SETA KS+EIAAEATK
Sbjct: 1    MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATK 60

Query: 1157 KADQIKIEALKRADQIKSLAENISAPQIPINAAISLVDSSANSGPSDAELDMFGVTDDLR 978
            +AD +       A QIK LA ++  P IP   AI  + ++A+S P  AEL+ +G+TDDLR
Sbjct: 61   QADLL-------AGQIKHLASDLPVPSIPPIPAIPPIPAAASSVPDAAELECYGITDDLR 113

Query: 977  EFVKGITHNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQERHATLVLLTVKEISSLRYQL 798
            EFVKG+T NTF+DFP+QD PE+S++PTVSNVRQDL EWQ RH TLVL  VKEIS  RY+L
Sbjct: 114  EFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVLSAVKEISKFRYEL 173

Query: 797  CPRHMKERKFWKIYFILVNTHVAPYEKRYMEEKLKSAEKEKDDELKENPPVGTSSKPEST 618
            CPR+MKERKFW++YF+LVN+++AP+EK+Y EE    AE+EK D  KE     T+++P+ T
Sbjct: 174  CPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDT 233

Query: 617  PTIRPKTSTSSAEQDLDVFLLGDLGS 540
              +  KTS+++ E DLDVFLLGDLGS
Sbjct: 234  -KVPSKTSSTNPEHDLDVFLLGDLGS 258


>ref|XP_002514599.1| conserved hypothetical protein [Ricinus communis]
            gi|223546203|gb|EEF47705.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 312

 Score =  294 bits (753), Expect = 4e-77
 Identities = 168/293 (57%), Positives = 203/293 (69%), Gaps = 31/293 (10%)
 Frame = -1

Query: 1337 MDFWARARNFAEETAKRSTELTKEAAKRSQEFTINGSSKISDIVSETAKKSKEIAAEATK 1158
            MDFW +AR+FAEE AKRS ELTKEAAKRSQE TI GSSK+SDIVSETAK+SKEIAAEA++
Sbjct: 1    MDFWQKARSFAEEAAKRSQELTKEAAKRSQELTI-GSSKLSDIVSETAKRSKEIAAEASR 59

Query: 1157 K------------------------------ADQIKIEALKRADQIKSLAENISAPQIPI 1068
            +                              ++QIK +A+KRADQIKSLA    +  +  
Sbjct: 60   RSQEIRITSSLKLSDIVSETAKRSKEIAAEASNQIKSQAIKRADQIKSLATTSGSGAV-- 117

Query: 1067 NAAISLVDSSANSGPSDAELDMFGVTDDLREFVKGITHNTFQDFPIQDGPEISEIPTVSN 888
                    +SA     + EL+ FG+T++LREFVK IT  TFQDFP+QD  E+S++P VSN
Sbjct: 118  --------ASAVEPQQEKELERFGITEELREFVKEITIATFQDFPLQDDSEMSDVPAVSN 169

Query: 887  VRQDLTEWQERHATLVLLTVKEISSLRYQLCPRHMKERKFWKIYFILVNTHVAPYEKRYM 708
            VRQDLTEWQE+HA LVL +VKEIS LRY+LCPR MKERKFW+IYFILVN HV PYEKRYM
Sbjct: 170  VRQDLTEWQEKHANLVLSSVKEISKLRYELCPRTMKERKFWRIYFILVNKHVDPYEKRYM 229

Query: 707  EEKLK-SAEKEKDDELKENPPVGTSSKPESTPTIRPKTSTSSAEQDLDVFLLG 552
            EE  + S E+ KD E+++ P    +SKPE   + R   S +SAEQDLDVFLLG
Sbjct: 230  EEAAQDSTEQVKDHEVEKLPEAMVTSKPEVKKSSR--QSKASAEQDLDVFLLG 280


>ref|XP_002454354.1| hypothetical protein SORBIDRAFT_04g029290 [Sorghum bicolor]
            gi|241934185|gb|EES07330.1| hypothetical protein
            SORBIDRAFT_04g029290 [Sorghum bicolor]
          Length = 301

 Score =  292 bits (747), Expect = 2e-76
 Identities = 151/266 (56%), Positives = 193/266 (72%)
 Frame = -1

Query: 1337 MDFWARARNFAEETAKRSTELTKEAAKRSQEFTINGSSKISDIVSETAKKSKEIAAEATK 1158
            MD W RAR+FA E AKRS EL+ EAAKRS       + K  +I SETA KS+EIAAEATK
Sbjct: 1    MDLWERARSFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATK 60

Query: 1157 KADQIKIEALKRADQIKSLAENISAPQIPINAAISLVDSSANSGPSDAELDMFGVTDDLR 978
            +AD +       A QI  LA ++  P IP   AI  + ++A+S    AEL+ +G+TDDLR
Sbjct: 61   QADLL-------AGQIMHLASDLPVPSIPPIPAIPPIAAAASSESDTAELERYGITDDLR 113

Query: 977  EFVKGITHNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQERHATLVLLTVKEISSLRYQL 798
            EFVKG+T +TF+DFP+QD PE+S++PTVSNVRQDL EWQ RHATLVL  VKEIS  RY+L
Sbjct: 114  EFVKGMTLSTFRDFPLQDEPEMSDVPTVSNVRQDLNEWQARHATLVLSAVKEISKFRYEL 173

Query: 797  CPRHMKERKFWKIYFILVNTHVAPYEKRYMEEKLKSAEKEKDDELKENPPVGTSSKPEST 618
            CPR+MKERKFW++YF+LVN+++AP+EK+Y EE    AE+EK D  KE     T+++P+ T
Sbjct: 174  CPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSPKEASQASTTAEPKDT 233

Query: 617  PTIRPKTSTSSAEQDLDVFLLGDLGS 540
                 K+S+++ E DLDVFLLGDLGS
Sbjct: 234  KA-PSKSSSTNPEHDLDVFLLGDLGS 258


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