BLASTX nr result

ID: Coptis21_contig00005026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005026
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611209.1| Ycf49-like protein [Medicago truncatula] gi|...   177   3e-42
ref|XP_003631430.1| PREDICTED: ycf49-like protein-like [Vitis vi...   175   2e-41
emb|CBI34804.3| unnamed protein product [Vitis vinifera]              175   2e-41
ref|XP_002298086.1| predicted protein [Populus trichocarpa] gi|2...   175   2e-41
ref|XP_004147956.1| PREDICTED: ycf49-like protein-like [Cucumis ...   171   4e-40

>ref|XP_003611209.1| Ycf49-like protein [Medicago truncatula]
           gi|355512544|gb|AES94167.1| Ycf49-like protein [Medicago
           truncatula]
          Length = 172

 Score =  177 bits (450), Expect = 3e-42
 Identities = 81/109 (74%), Positives = 88/109 (80%)
 Frame = +1

Query: 256 LQLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKGLSWGMVPLLGGAFC 435
           L+L EP NALSLPTWA+HVSSVVEWI AM LVW+YGE SGYE+WKGLSWGMVPLLGGAFC
Sbjct: 64  LELQEPSNALSLPTWAVHVSSVVEWIIAMALVWQYGEKSGYEAWKGLSWGMVPLLGGAFC 123

Query: 436 ACTWHFFYNXXXXXXXXXXXXXXTVIGNFTMCIAAFRIYKSSQGGSENL 582
           ACTWHFFYN              TVIGNFTMCIAA+RIYKSS+  SEN+
Sbjct: 124 ACTWHFFYNSDSLEVLVALQAALTVIGNFTMCIAAYRIYKSSRESSENI 172


>ref|XP_003631430.1| PREDICTED: ycf49-like protein-like [Vitis vinifera]
          Length = 181

 Score =  175 bits (444), Expect = 2e-41
 Identities = 87/123 (70%), Positives = 92/123 (74%), Gaps = 5/123 (4%)
 Frame = +1

Query: 229 GDAIAAEFPL-----QLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKG 393
           G A AAE PL     Q SEP NALSLPTWAIHVSSVVEWI AM LVW+YGE  G+ESWKG
Sbjct: 59  GPASAAELPLLTTPLQFSEPANALSLPTWAIHVSSVVEWIIAMILVWKYGEQPGFESWKG 118

Query: 394 LSWGMVPLLGGAFCACTWHFFYNXXXXXXXXXXXXXXTVIGNFTMCIAAFRIYKSSQGGS 573
           LSWGMVPLLGGAFCACTWHFFYN              TV+GN TMCIAAFRIY+SSQ  S
Sbjct: 119 LSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAALTVLGNATMCIAAFRIYQSSQERS 178

Query: 574 ENL 582
           +NL
Sbjct: 179 KNL 181


>emb|CBI34804.3| unnamed protein product [Vitis vinifera]
          Length = 137

 Score =  175 bits (444), Expect = 2e-41
 Identities = 87/123 (70%), Positives = 92/123 (74%), Gaps = 5/123 (4%)
 Frame = +1

Query: 229 GDAIAAEFPL-----QLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKG 393
           G A AAE PL     Q SEP NALSLPTWAIHVSSVVEWI AM LVW+YGE  G+ESWKG
Sbjct: 15  GPASAAELPLLTTPLQFSEPANALSLPTWAIHVSSVVEWIIAMILVWKYGEQPGFESWKG 74

Query: 394 LSWGMVPLLGGAFCACTWHFFYNXXXXXXXXXXXXXXTVIGNFTMCIAAFRIYKSSQGGS 573
           LSWGMVPLLGGAFCACTWHFFYN              TV+GN TMCIAAFRIY+SSQ  S
Sbjct: 75  LSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAALTVLGNATMCIAAFRIYQSSQERS 134

Query: 574 ENL 582
           +NL
Sbjct: 135 KNL 137


>ref|XP_002298086.1| predicted protein [Populus trichocarpa] gi|222845344|gb|EEE82891.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  175 bits (443), Expect = 2e-41
 Identities = 86/118 (72%), Positives = 91/118 (77%), Gaps = 2/118 (1%)
 Frame = +1

Query: 235 AIAAEFPL--QLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKGLSWGM 408
           A A E PL  QLSEP NALSLPTWAIHVSSVVEWIAAM LVW+YGE SG+ESWKGL+WGM
Sbjct: 71  ASATELPLLGQLSEPANALSLPTWAIHVSSVVEWIAAMALVWQYGEKSGFESWKGLAWGM 130

Query: 409 VPLLGGAFCACTWHFFYNXXXXXXXXXXXXXXTVIGNFTMCIAAFRIYKSSQGGSENL 582
           VPLLGGAFCACTWHFFYN              TVIGN TMCIAAFRI+ SS+  S NL
Sbjct: 131 VPLLGGAFCACTWHFFYNSESLEVLVALQAALTVIGNATMCIAAFRIHMSSEERSRNL 188


>ref|XP_004147956.1| PREDICTED: ycf49-like protein-like [Cucumis sativus]
           gi|449494281|ref|XP_004159501.1| PREDICTED: ycf49-like
           protein-like [Cucumis sativus]
          Length = 186

 Score =  171 bits (432), Expect = 4e-40
 Identities = 81/109 (74%), Positives = 85/109 (77%)
 Frame = +1

Query: 256 LQLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKGLSWGMVPLLGGAFC 435
           L  +EP+NALSLPTWAIHVSSVVEWI AM LVW+YGE SG ESWKGLSWGMVPLLGGAFC
Sbjct: 78  LLFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFC 137

Query: 436 ACTWHFFYNXXXXXXXXXXXXXXTVIGNFTMCIAAFRIYKSSQGGSENL 582
           ACTWHFFYN              T IGN TMCIAAFRIYKSSQ  S+NL
Sbjct: 138 ACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL 186


Top