BLASTX nr result

ID: Coptis21_contig00005010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005010
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002449820.1| hypothetical protein SORBIDRAFT_05g023920 [S...   134   2e-29
gb|EAZ01602.1| hypothetical protein OsI_23639 [Oryza sativa Indi...   132   1e-28
ref|NP_001067784.1| Os11g0428800 [Oryza sativa Japonica Group] g...   126   6e-27
ref|NP_001147285.1| chemocyanin precursor [Zea mays] gi|19560948...   121   2e-25
ref|XP_002464007.1| hypothetical protein SORBIDRAFT_01g010500 [S...   120   3e-25

>ref|XP_002449820.1| hypothetical protein SORBIDRAFT_05g023920 [Sorghum bicolor]
           gi|241935663|gb|EES08808.1| hypothetical protein
           SORBIDRAFT_05g023920 [Sorghum bicolor]
          Length = 126

 Score =  134 bits (337), Expect = 2e-29
 Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
 Frame = -3

Query: 631 MGRGKCTKVLF-LALLITAYLKISDAATHQVGETNGWGFSVSYTDWANQKSFAAGDTLVF 455
           MGRG C+ VL  L   +     +  A TH VG++ GWGFSVSY  W+  K+FAAGDTLVF
Sbjct: 1   MGRGMCSAVLVALGFSLLVCSALVSAETHVVGDSKGWGFSVSYDSWSGGKTFAAGDTLVF 60

Query: 454 NYPASAHNVVPVKIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSGMK 275
           NY A  HN V V  + YRSCK   +  A A A+G  +F LKKG NYFIC   GHC++GMK
Sbjct: 61  NYQAGVHNAVAVSASEYRSCKVRSAADAAATASGTARFDLKKGVNYFICGVPGHCAAGMK 120

Query: 274 IQVNA 260
           ++V A
Sbjct: 121 LRVVA 125


>gb|EAZ01602.1| hypothetical protein OsI_23639 [Oryza sativa Indica Group]
          Length = 127

 Score =  132 bits (331), Expect = 1e-28
 Identities = 67/126 (53%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
 Frame = -3

Query: 631 MGRGKCTKVLFLALLITAYLKISDAA--THQVGETNGWGFSVSYTDWANQKSFAAGDTLV 458
           MGRG C        L+      + AA  TH VG++ GWGFSV+Y  WA+ K+FAAGDTLV
Sbjct: 1   MGRGFCASSFVAVGLVVLVCSAAAAAAETHVVGDSKGWGFSVAYDSWASGKAFAAGDTLV 60

Query: 457 FNYPASAHNVVPVKIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSGM 278
           FNY A  HNVV    A YRSCK   S  A A A G+ K  LKKG NYFIC   GHC++GM
Sbjct: 61  FNYQAGVHNVVAASAAEYRSCKVRNSADAAATAAGSAKLDLKKGVNYFICGVPGHCATGM 120

Query: 277 KIQVNA 260
           K++V A
Sbjct: 121 KLRVVA 126


>ref|NP_001067784.1| Os11g0428800 [Oryza sativa Japonica Group]
           gi|62734521|gb|AAX96630.1| basic blue copper protein
           [Oryza sativa Japonica Group] gi|77550421|gb|ABA93218.1|
           Plastocyanin-like domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113645006|dbj|BAF28147.1| Os11g0428800 [Oryza sativa
           Japonica Group] gi|125534214|gb|EAY80762.1| hypothetical
           protein OsI_35940 [Oryza sativa Indica Group]
           gi|125576993|gb|EAZ18215.1| hypothetical protein
           OsJ_33756 [Oryza sativa Japonica Group]
           gi|215769454|dbj|BAH01683.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 124

 Score =  126 bits (316), Expect = 6e-27
 Identities = 63/116 (54%), Positives = 77/116 (66%)
 Frame = -3

Query: 607 VLFLALLITAYLKISDAATHQVGETNGWGFSVSYTDWANQKSFAAGDTLVFNYPASAHNV 428
           ++ L LL  A+     A TH VG++NGW FSVS+  WA+ K FAAGDTLVFNY   AHNV
Sbjct: 8   LVVLGLLALAFSTTVLAETHVVGDSNGWDFSVSFDSWADGKVFAAGDTLVFNYKPGAHNV 67

Query: 427 VPVKIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQVNA 260
           + V  A YRSCK   S  + A ATG   F LKKG NY+IC   GHC++GMK++V A
Sbjct: 68  LAVDAATYRSCKVGSSADSVAAATGTASFLLKKGVNYYICGVPGHCAAGMKLRVVA 123


>ref|NP_001147285.1| chemocyanin precursor [Zea mays] gi|195609488|gb|ACG26574.1|
           chemocyanin precursor [Zea mays]
           gi|413933304|gb|AFW67855.1| chemocyanin [Zea mays]
          Length = 132

 Score =  121 bits (304), Expect = 2e-25
 Identities = 62/126 (49%), Positives = 81/126 (64%), Gaps = 3/126 (2%)
 Frame = -3

Query: 628 GRGKCTKVLFLALLITAYL---KISDAATHQVGETNGWGFSVSYTDWANQKSFAAGDTLV 458
           G G  +    LAL++   L   + +++A + VG+  GW F+ +   W N K F AGD LV
Sbjct: 10  GTGSGSSAAALALVLLCALLRGEFAESAVYTVGDRGGWSFNTA--SWPNGKRFRAGDVLV 67

Query: 457 FNYPASAHNVVPVKIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSGM 278
           F Y A AHNVVPV  AGY SC A   + A+A ATGND+ TL++GANYFICS+ GHC +GM
Sbjct: 68  FRYDARAHNVVPVSAAGYSSCSA--PEGARALATGNDRVTLRRGANYFICSFPGHCQAGM 125

Query: 277 KIQVNA 260
           K+ V A
Sbjct: 126 KVAVTA 131


>ref|XP_002464007.1| hypothetical protein SORBIDRAFT_01g010500 [Sorghum bicolor]
           gi|241917861|gb|EER91005.1| hypothetical protein
           SORBIDRAFT_01g010500 [Sorghum bicolor]
          Length = 128

 Score =  120 bits (301), Expect = 3e-25
 Identities = 63/123 (51%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
 Frame = -3

Query: 625 RGKCTKVLFLALL-ITAYLKISDAATHQVGETNGWGFSVSYTDWANQKSFAAGDTLVFNY 449
           RG    VL L LL +  + + +++A + VG+ +GW F+ +  +W   K F AGD LVF Y
Sbjct: 9   RGSNAVVLALVLLCVLLHGEFAESAVYTVGDRSGWSFNTA--NWPKGKRFRAGDVLVFKY 66

Query: 448 PASAHNVVPVKIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQ 269
            A AHNVVPV  AGYRSC A      +A  TGND+ TLK+GANYFICS+ GHC  GMKI 
Sbjct: 67  NAKAHNVVPVSAAGYRSCSAPRG--VRALTTGNDRVTLKRGANYFICSFPGHCQGGMKIA 124

Query: 268 VNA 260
           V A
Sbjct: 125 VTA 127


Top