BLASTX nr result

ID: Coptis21_contig00005003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005003
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283567.1| PREDICTED: uncharacterized protein LOC100256...   189   3e-46
ref|XP_002330234.1| predicted protein [Populus trichocarpa] gi|2...   174   8e-42
ref|XP_004144770.1| PREDICTED: CST complex subunit TEN1-like iso...   170   1e-40
ref|XP_002512472.1| conserved hypothetical protein [Ricinus comm...   170   2e-40
ref|NP_001236503.1| uncharacterized protein LOC100305519 [Glycin...   164   8e-39

>ref|XP_002283567.1| PREDICTED: uncharacterized protein LOC100256314 isoform 1 [Vitis
           vinifera] gi|359487500|ref|XP_003633604.1| PREDICTED:
           uncharacterized protein LOC100256314 isoform 2 [Vitis
           vinifera] gi|296089710|emb|CBI39529.3| unnamed protein
           product [Vitis vinifera]
          Length = 125

 Score =  189 bits (479), Expect = 3e-46
 Identities = 89/120 (74%), Positives = 109/120 (90%)
 Frame = +1

Query: 7   SSAIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVETAVAVIVHGSYNLKIDTQHL 186
           SSA+K G LV+LQDL P+SPF K GASLRV GKLQ++SVETA+A+++ GS NLKI+TQHL
Sbjct: 3   SSAVKSGALVSLQDLQPSSPFFKQGASLRVTGKLQEYSVETAIAIVIDGSANLKINTQHL 62

Query: 187 RNISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHMSD 366
           R+++FR GSIYQFIGELLI+PD EA+LQAR+GRNVDGIDLNLY+QSLQL+RQFQ +HM+D
Sbjct: 63  RDLTFRAGSIYQFIGELLIQPDNEAILQARVGRNVDGIDLNLYHQSLQLVRQFQADHMND 122


>ref|XP_002330234.1| predicted protein [Populus trichocarpa] gi|222871690|gb|EEF08821.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  174 bits (441), Expect = 8e-42
 Identities = 82/121 (67%), Positives = 108/121 (89%)
 Frame = +1

Query: 4   SSSAIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVETAVAVIVHGSYNLKIDTQH 183
           ++ AIK G LVTL++L+P+SPF K GAS+RV GKLQ+++VETA+AV+  G+  LKIDTQH
Sbjct: 2   AAMAIKHGELVTLEELNPSSPFFKQGASVRVTGKLQEYTVETAIAVVADGNATLKIDTQH 61

Query: 184 LRNISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHMS 363
           LR+ISFR+GS+YQFIGELLI+PD+EA+LQAR+GR  DGIDL+LY+QSLQLLRQFQ +H++
Sbjct: 62  LRDISFRIGSVYQFIGELLIQPDSEAILQARVGRIADGIDLSLYHQSLQLLRQFQADHLN 121

Query: 364 D 366
           +
Sbjct: 122 N 122


>ref|XP_004144770.1| PREDICTED: CST complex subunit TEN1-like isoform 1 [Cucumis
           sativus] gi|449454055|ref|XP_004144771.1| PREDICTED: CST
           complex subunit TEN1-like isoform 2 [Cucumis sativus]
           gi|449490870|ref|XP_004158731.1| PREDICTED: CST complex
           subunit TEN1-like isoform 1 [Cucumis sativus]
           gi|449490872|ref|XP_004158732.1| PREDICTED: CST complex
           subunit TEN1-like isoform 2 [Cucumis sativus]
          Length = 126

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/119 (70%), Positives = 104/119 (87%), Gaps = 1/119 (0%)
 Frame = +1

Query: 10  SAIKPGILVTLQDL-HPTSPFLKNGASLRVVGKLQDFSVETAVAVIVHGSYNLKIDTQHL 186
           SAIK G LV+L+DL HP+S F K+GASLRV GKL ++SVETA+A+IV G+ NLKIDTQHL
Sbjct: 4   SAIKSGALVSLKDLMHPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHL 63

Query: 187 RNISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHMS 363
             +S R+GSIYQFIGELL++ D EA+L+AR+GRNVDGIDLNLY+QSLQLLRQFQ +H++
Sbjct: 64  IELSIRIGSIYQFIGELLVQSDNEAILKARVGRNVDGIDLNLYHQSLQLLRQFQADHLN 122


>ref|XP_002512472.1| conserved hypothetical protein [Ricinus communis]
           gi|223548433|gb|EEF49924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score =  170 bits (430), Expect = 2e-40
 Identities = 81/116 (69%), Positives = 101/116 (87%)
 Frame = +1

Query: 13  AIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVETAVAVIVHGSYNLKIDTQHLRN 192
           AIK G LVTL DLHP+SPF K G+S+R+ GKLQ+++V+TA+A I  G+  LKIDTQHL +
Sbjct: 5   AIKHGELVTLLDLHPSSPFFKQGSSIRITGKLQEYTVDTAIARIADGNAILKIDTQHLSD 64

Query: 193 ISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHM 360
           +SFR+GS+YQFIGELLI+PD EA+LQAR+GRNVDGIDLNLY QSLQLLRQF+ +H+
Sbjct: 65  LSFRIGSVYQFIGELLIQPDDEAILQARVGRNVDGIDLNLYNQSLQLLRQFEADHI 120


>ref|NP_001236503.1| uncharacterized protein LOC100305519 [Glycine max]
           gi|255625773|gb|ACU13231.1| unknown [Glycine max]
          Length = 126

 Score =  164 bits (415), Expect = 8e-39
 Identities = 78/121 (64%), Positives = 100/121 (82%)
 Frame = +1

Query: 4   SSSAIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVETAVAVIVHGSYNLKIDTQH 183
           +S  IK G LV+LQDL P+SPF K GASLR+ GKL ++S+ET +A I+ G   LK+ T+H
Sbjct: 2   ASLEIKSGALVSLQDLRPSSPFFKQGASLRITGKLHEYSIETGLATIIDGDDILKVSTKH 61

Query: 184 LRNISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHMS 363
           LR+++F+VGS+YQFIGELLI+PD E VLQAR+GRNVDGIDLNLY+QSL LLRQFQ  H++
Sbjct: 62  LRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLRQFQTNHLN 121

Query: 364 D 366
           +
Sbjct: 122 N 122


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