BLASTX nr result

ID: Coptis21_contig00004998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004998
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547771.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-...   427   e-117
ref|XP_003520993.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-...   416   e-114
emb|CAN63106.1| hypothetical protein VITISV_000496 [Vitis vinifera]   415   e-113
ref|XP_002303074.1| predicted protein [Populus trichocarpa] gi|2...   414   e-113
gb|ACU22780.1| unknown [Glycine max]                                  413   e-113

>ref|XP_003547771.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-like [Glycine max]
          Length = 278

 Score =  427 bits (1097), Expect = e-117
 Identities = 209/274 (76%), Positives = 233/274 (85%), Gaps = 1/274 (0%)
 Frame = +2

Query: 164 SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSRV 343
           +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCPNV VYWTNRALCH+KRNDW RV
Sbjct: 5   AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 344 EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 523
           EEDSR+A+QLD NSVKAHYM+GL+LL+R E A+G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65  EEDSRKAIQLDSNSVKAHYMLGLALLQRQESAKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 524 ELAKAKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 700
           ELAKAKYLEWE +SS+RSW+LQSLKEACE AL+ ++ LD SQ  G  D  T S+ EQL  
Sbjct: 125 ELAKAKYLEWERSSSKRSWELQSLKEACESALKEKHFLDYSQMEGFVDDATTSHSEQLEA 184

Query: 701 LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 880
           LE+VF  A E DIPTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQKVGKFDPI
Sbjct: 185 LERVFNTAAEADIPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKVGKFDPI 244

Query: 881 TREPLYEHQLISNLAIKEAVHAFLKEHGWAYKTD 982
           TREPL   QL+ NLAIKEAV AFL +HGWAYK D
Sbjct: 245 TREPLDPSQLVPNLAIKEAVEAFLDKHGWAYKID 278


>ref|XP_003520993.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-like [Glycine max]
          Length = 278

 Score =  416 bits (1070), Expect = e-114
 Identities = 204/274 (74%), Positives = 228/274 (83%), Gaps = 1/274 (0%)
 Frame = +2

Query: 164 SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSRV 343
           +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCPNV VYWTNRALCH+KRNDW RV
Sbjct: 5   AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 344 EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 523
           EEDSR+A+QLD NSVKAHY++GL+LL+R E  +G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65  EEDSRKAIQLDSNSVKAHYILGLALLQRQESVKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 524 ELAKAKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 700
           ELAKAKYLEWE  SS+RSW+LQ LKEACE AL+ ++ LD SQ  G  D  T S  EQL  
Sbjct: 125 ELAKAKYLEWERLSSKRSWELQCLKEACESALKEKHFLDFSQMEGFVDDATTSQSEQLEA 184

Query: 701 LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 880
           LE+VF  A E D PTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQKVGKFDPI
Sbjct: 185 LERVFNTAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKVGKFDPI 244

Query: 881 TREPLYEHQLISNLAIKEAVHAFLKEHGWAYKTD 982
           TREPL   QL+ NLAIKEAV AFL +HGWAYK +
Sbjct: 245 TREPLDPSQLVPNLAIKEAVEAFLDKHGWAYKIE 278


>emb|CAN63106.1| hypothetical protein VITISV_000496 [Vitis vinifera]
          Length = 276

 Score =  415 bits (1067), Expect = e-113
 Identities = 202/270 (74%), Positives = 230/270 (85%), Gaps = 1/270 (0%)
 Frame = +2

Query: 176 KQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSRVEEDS 355
           KQAE  R DGN  FKK RF AAIDAYTEAITLCPNV +YWTNRAL H KRN+W+RVEED 
Sbjct: 7   KQAEQLRLDGNTYFKKGRFAAAIDAYTEAITLCPNVPIYWTNRALGHRKRNNWTRVEEDC 66

Query: 356 RRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQELAK 535
           RRA+QLD NSVKAHYM+GL+LL+R EYAEGVK+LEKALDLGRGANPK YMVE+IWQELAK
Sbjct: 67  RRAIQLDSNSVKAHYMLGLALLQREEYAEGVKELEKALDLGRGANPKGYMVEEIWQELAK 126

Query: 536 AKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQ-SGITDITTNSYIEQLTTLEQV 712
           AKY+EWEH S++RSW+LQ+LKEACE AL+ ++L D+S+  G  D    S +EQL  L++V
Sbjct: 127 AKYMEWEHESTKRSWELQTLKEACETALKEKHLFDSSELEGFLDEIPRSNLEQLEALDRV 186

Query: 713 FGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPITREP 892
           F  A E D+PT+VPDYLCC ITLDIFRDPVI PSG+TYER VLLDHL+KVGKFDPITREP
Sbjct: 187 FRIAAEADLPTDVPDYLCCKITLDIFRDPVIAPSGLTYEREVLLDHLEKVGKFDPITREP 246

Query: 893 LYEHQLISNLAIKEAVHAFLKEHGWAYKTD 982
           L + QL+SNLAIKEAV AFL EHGWAYKTD
Sbjct: 247 LSQSQLVSNLAIKEAVQAFLDEHGWAYKTD 276


>ref|XP_002303074.1| predicted protein [Populus trichocarpa] gi|222844800|gb|EEE82347.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  414 bits (1064), Expect = e-113
 Identities = 200/278 (71%), Positives = 235/278 (84%), Gaps = 4/278 (1%)
 Frame = +2

Query: 161 LSAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSR 340
           LS   K+A+  RQ+GN CF KDRF AAIDAYT AITLCP V VYWTNRALCH KRNDW+R
Sbjct: 8   LSDEEKRADKLRQEGNICFSKDRFQAAIDAYTAAITLCPKVPVYWTNRALCHRKRNDWTR 67

Query: 341 VEEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIW 520
           VEEDSR+A+QLDH SVKAHYM+GL+LL++ EY+EGVK+LEKALDLGRGANP  YMVE+IW
Sbjct: 68  VEEDSRKAIQLDHYSVKAHYMLGLALLQKQEYSEGVKELEKALDLGRGANPNGYMVEEIW 127

Query: 521 QELAKAKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQS-GITD---ITTNSYIE 688
           +ELAKAKYLEWE  S+QRSW+LQSLKEACE+AL+ ++ LD S++ G  D   ++  S+++
Sbjct: 128 EELAKAKYLEWEEESTQRSWELQSLKEACERALKEKHFLDDSETEGFLDDPIVSIVSHLQ 187

Query: 689 QLTTLEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGK 868
           QL  L QVF KA EDD P+EVPDYLCC ITLDI RDPVITPSGV+YERAVLLDHL+KVG 
Sbjct: 188 QLELLGQVFQKAAEDDTPSEVPDYLCCKITLDILRDPVITPSGVSYERAVLLDHLEKVGN 247

Query: 869 FDPITREPLYEHQLISNLAIKEAVHAFLKEHGWAYKTD 982
           FDP+TREPL   QL+ NLAIKEAVHA+L +HGWAYKT+
Sbjct: 248 FDPVTREPLEPSQLVPNLAIKEAVHAYLDKHGWAYKTE 285


>gb|ACU22780.1| unknown [Glycine max]
          Length = 278

 Score =  413 bits (1062), Expect = e-113
 Identities = 203/274 (74%), Positives = 226/274 (82%), Gaps = 1/274 (0%)
 Frame = +2

Query: 164 SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSRV 343
           +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCPNV VYWTNRALCH+KRNDW RV
Sbjct: 5   AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 344 EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 523
           EEDSR+A+QLD NSVKAHY++GL+LL+R E  +G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65  EEDSRKAIQLDSNSVKAHYILGLALLQRQESVKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 524 ELAKAKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 700
           ELAKAKYLEWE  SS+RSW+LQ LKEACE AL+ +Y LD SQ  G  D  T S  EQL  
Sbjct: 125 ELAKAKYLEWERLSSKRSWELQCLKEACESALKEKYFLDFSQMEGFVDDATTSQSEQLEA 184

Query: 701 LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 880
           LE+VF  A E D PTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQK GKFDPI
Sbjct: 185 LERVFNTAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKGGKFDPI 244

Query: 881 TREPLYEHQLISNLAIKEAVHAFLKEHGWAYKTD 982
           TREPL   Q + NLAIKEAV AFL +HGWAYK +
Sbjct: 245 TREPLDPSQSVPNLAIKEAVEAFLDKHGWAYKIE 278


Top