BLASTX nr result

ID: Coptis21_contig00004980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004980
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [...   152   4e-35
ref|NP_001066387.1| Os12g0207300 [Oryza sativa Japonica Group] g...   152   4e-35
gb|EAZ19968.1| hypothetical protein OsJ_35559 [Oryza sativa Japo...   152   4e-35
gb|EAY82574.1| hypothetical protein OsI_37796 [Oryza sativa Indi...   152   4e-35
gb|AEO34827.1| hypothetical protein [Amblyomma maculatum]             151   5e-35

>ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [Cucumis sativus]
           gi|449505752|ref|XP_004162559.1| PREDICTED: AP-2 complex
           subunit sigma-like [Cucumis sativus]
          Length = 142

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -1

Query: 218 ESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 39
           ESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFS+CVDITDNELAYLECI
Sbjct: 25  ESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECI 84

Query: 38  HLFVEILDHFFS 3
           HLFVEILDHFFS
Sbjct: 85  HLFVEILDHFFS 96


>ref|NP_001066387.1| Os12g0207300 [Oryza sativa Japonica Group]
           gi|242085198|ref|XP_002443024.1| hypothetical protein
           SORBIDRAFT_08g006500 [Sorghum bicolor]
           gi|17149110|gb|AAL35901.1|AF443601_1 clathrin assembly
           protein AP17-like protein [Oryza sativa]
           gi|77553342|gb|ABA96138.1| Clathrin coat assembly
           protein AP17, putative, expressed [Oryza sativa Japonica
           Group] gi|113648894|dbj|BAF29406.1| Os12g0207300 [Oryza
           sativa Japonica Group] gi|215697333|dbj|BAG91327.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|241943717|gb|EES16862.1| hypothetical protein
           SORBIDRAFT_08g006500 [Sorghum bicolor]
          Length = 142

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -1

Query: 218 ESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 39
           +SEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI
Sbjct: 25  DSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 84

Query: 38  HLFVEILDHFFS 3
           HLFVEILDHFFS
Sbjct: 85  HLFVEILDHFFS 96


>gb|EAZ19968.1| hypothetical protein OsJ_35559 [Oryza sativa Japonica Group]
          Length = 151

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -1

Query: 218 ESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 39
           +SEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI
Sbjct: 34  DSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 93

Query: 38  HLFVEILDHFFS 3
           HLFVEILDHFFS
Sbjct: 94  HLFVEILDHFFS 105


>gb|EAY82574.1| hypothetical protein OsI_37796 [Oryza sativa Indica Group]
          Length = 151

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -1

Query: 218 ESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 39
           +SEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI
Sbjct: 34  DSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 93

Query: 38  HLFVEILDHFFS 3
           HLFVEILDHFFS
Sbjct: 94  HLFVEILDHFFS 105


>gb|AEO34827.1| hypothetical protein [Amblyomma maculatum]
          Length = 142

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -1

Query: 218 ESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 39
           ESEKHKVE+EVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI
Sbjct: 25  ESEKHKVEFEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECI 84

Query: 38  HLFVEILDHFFS 3
           HLFVEILDHFFS
Sbjct: 85  HLFVEILDHFFS 96


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