BLASTX nr result

ID: Coptis21_contig00004975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004975
         (1709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30299.3| unnamed protein product [Vitis vinifera]              432   e-118
ref|XP_002276674.1| PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosph...   431   e-118
ref|XP_002301704.1| predicted protein [Populus trichocarpa] gi|2...   425   e-116
ref|XP_002305862.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
ref|XP_003542605.1| PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosph...   419   e-114

>emb|CBI30299.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score =  432 bits (1111), Expect = e-118
 Identities = 219/282 (77%), Positives = 249/282 (88%), Gaps = 1/282 (0%)
 Frame = -1

Query: 1208 TGVPYKCSRS-RFSVHCVAAVRFRPCIDIHKGKVKQIVGSTLHDLKDGGSDIVTNFESDK 1032
            T +P   S+  R SV C  AVRFRPCIDIHKGKVKQIVGSTL D K+GGS +VTNFESDK
Sbjct: 38   TAMPSPISKPLRLSVRC--AVRFRPCIDIHKGKVKQIVGSTLRDTKEGGSTLVTNFESDK 95

Query: 1031 SAAEYADLYKKDRLTGGHVIMLGGDDLSRSAAIDALLAYPGGLQVGGGINSDNALSFIEK 852
            SAAE+A LYK+D LTGGHVIMLG D LS SAA +AL AYPGGLQVGGGINS+NAL +IE+
Sbjct: 96   SAAEFAKLYKEDGLTGGHVIMLGADPLSTSAATEALHAYPGGLQVGGGINSENALRYIEE 155

Query: 851  GASHVIVTSYVFNNGHMDLQRLKDLICNIGRRRLVLDLSCRKKGGKYAIVTDRWQKFSNV 672
            GASHVIVTSYVFNNG MDL+RLKDL+  +G++RLVLDLSCRKK GKYAIVTDRWQKFS+V
Sbjct: 156  GASHVIVTSYVFNNGQMDLERLKDLVHLVGKQRLVLDLSCRKKEGKYAIVTDRWQKFSDV 215

Query: 671  YLDEETLEFLAVHADEFLVHGVDVEGKRLGIDEELVALLGRHSPIPVTYAGGVMTMADLE 492
             LD+E L+FLA ++DEFLVHGVDVEGK+LGIDEELVALLG++SPIPVTYAGGV  MADLE
Sbjct: 216  CLDQEILDFLASYSDEFLVHGVDVEGKKLGIDEELVALLGKYSPIPVTYAGGVTVMADLE 275

Query: 491  RIKVAGAGRVDVTVGSALDIFGGDIAYKDVVAWHKKQESVAV 366
            RIKVAG+GRVDVTVGSALDIFGG++AY+DVV WH +QE++ V
Sbjct: 276  RIKVAGSGRVDVTVGSALDIFGGNLAYRDVVNWHAQQEALTV 317


>ref|XP_002276674.1| PREDICTED: 1-(5-phosphoribosyl)-5-[(5-
            phosphoribosylamino)methylideneamino]
            imidazole-4-carboxamide isomerase, chloroplastic-like
            [Vitis vinifera]
          Length = 307

 Score =  431 bits (1109), Expect = e-118
 Identities = 216/271 (79%), Positives = 244/271 (90%)
 Frame = -1

Query: 1178 RFSVHCVAAVRFRPCIDIHKGKVKQIVGSTLHDLKDGGSDIVTNFESDKSAAEYADLYKK 999
            R SV C  AVRFRPCIDIHKGKVKQIVGSTL D K+GGS +VTNFESDKSAAE+A LYK+
Sbjct: 39   RLSVRC--AVRFRPCIDIHKGKVKQIVGSTLRDTKEGGSTLVTNFESDKSAAEFAKLYKE 96

Query: 998  DRLTGGHVIMLGGDDLSRSAAIDALLAYPGGLQVGGGINSDNALSFIEKGASHVIVTSYV 819
            D LTGGHVIMLG D LS SAA +AL AYPGGLQVGGGINS+NAL +IE+GASHVIVTSYV
Sbjct: 97   DGLTGGHVIMLGADPLSTSAATEALHAYPGGLQVGGGINSENALRYIEEGASHVIVTSYV 156

Query: 818  FNNGHMDLQRLKDLICNIGRRRLVLDLSCRKKGGKYAIVTDRWQKFSNVYLDEETLEFLA 639
            FNNG MDL+RLKDL+  +G++RLVLDLSCRKK GKYAIVTDRWQKFS+V LD+E L+FLA
Sbjct: 157  FNNGQMDLERLKDLVHLVGKQRLVLDLSCRKKEGKYAIVTDRWQKFSDVCLDQEILDFLA 216

Query: 638  VHADEFLVHGVDVEGKRLGIDEELVALLGRHSPIPVTYAGGVMTMADLERIKVAGAGRVD 459
             ++DEFLVHGVDVEGK+LGIDEELVALLG++SPIPVTYAGGV  MADLERIKVAG+GRVD
Sbjct: 217  SYSDEFLVHGVDVEGKKLGIDEELVALLGKYSPIPVTYAGGVTVMADLERIKVAGSGRVD 276

Query: 458  VTVGSALDIFGGDIAYKDVVAWHKKQESVAV 366
            VTVGSALDIFGG++AY+DVV WH +QE++ V
Sbjct: 277  VTVGSALDIFGGNLAYRDVVNWHAQQEALTV 307


>ref|XP_002301704.1| predicted protein [Populus trichocarpa] gi|222843430|gb|EEE80977.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  425 bits (1093), Expect = e-116
 Identities = 216/275 (78%), Positives = 244/275 (88%), Gaps = 1/275 (0%)
 Frame = -1

Query: 1187 SRSRFSVHCVAAVRFRPCIDIHKGKVKQIVGSTLHDLKD-GGSDIVTNFESDKSAAEYAD 1011
            S S  S+ C  AVRFRPCIDIHKGKVKQIVGSTL D K+  GS +VTNFESDKSAAE+A+
Sbjct: 2    SSSCLSIKC--AVRFRPCIDIHKGKVKQIVGSTLRDSKEEDGSALVTNFESDKSAAEFAN 59

Query: 1010 LYKKDRLTGGHVIMLGGDDLSRSAAIDALLAYPGGLQVGGGINSDNALSFIEKGASHVIV 831
            LYK+D L GGHVIMLG DDLS++AA++AL AYPGGLQVGGGIN +NAL++IE+GASHVIV
Sbjct: 60   LYKEDGLMGGHVIMLGADDLSKAAAVEALRAYPGGLQVGGGINVNNALNYIEEGASHVIV 119

Query: 830  TSYVFNNGHMDLQRLKDLICNIGRRRLVLDLSCRKKGGKYAIVTDRWQKFSNVYLDEETL 651
            TSYVFNNG MDL+RLKDL+  +G+++LVLDLSCRKK G+YAIVTDRWQKFS+VYLDEE L
Sbjct: 120  TSYVFNNGQMDLERLKDLVRVVGKQKLVLDLSCRKKDGRYAIVTDRWQKFSDVYLDEEVL 179

Query: 650  EFLAVHADEFLVHGVDVEGKRLGIDEELVALLGRHSPIPVTYAGGVMTMADLERIKVAGA 471
            EFLA +ADEFLVHGVDVEGKRLGIDE LVALLGRHSPIPVTYAGGV  M DLERIKVAG 
Sbjct: 180  EFLAHYADEFLVHGVDVEGKRLGIDEALVALLGRHSPIPVTYAGGVTIMIDLERIKVAGD 239

Query: 470  GRVDVTVGSALDIFGGDIAYKDVVAWHKKQESVAV 366
            G VD+TVGSALDIFGG++ YKDVVAWH +QE+V V
Sbjct: 240  GCVDLTVGSALDIFGGNLPYKDVVAWHTQQETVMV 274


>ref|XP_002305862.1| predicted protein [Populus trichocarpa] gi|222848826|gb|EEE86373.1|
            predicted protein [Populus trichocarpa]
          Length = 262

 Score =  421 bits (1081), Expect = e-115
 Identities = 210/262 (80%), Positives = 239/262 (91%), Gaps = 1/262 (0%)
 Frame = -1

Query: 1154 AVRFRPCIDIHKGKVKQIVGSTLHDLK-DGGSDIVTNFESDKSAAEYADLYKKDRLTGGH 978
            AVRFRPCIDIHKGKVKQIVGSTL DLK + GS +VTNFESDK+AAE+A+LYK+D L GGH
Sbjct: 1    AVRFRPCIDIHKGKVKQIVGSTLQDLKGEDGSALVTNFESDKTAAEFANLYKEDGLMGGH 60

Query: 977  VIMLGGDDLSRSAAIDALLAYPGGLQVGGGINSDNALSFIEKGASHVIVTSYVFNNGHMD 798
            VIMLG DDLS++ AI+AL AYPGGLQVGGGIN +NALS+IE+GASHVIVTSYVFNNG MD
Sbjct: 61   VIMLGADDLSKATAIEALRAYPGGLQVGGGINVNNALSYIEEGASHVIVTSYVFNNGQMD 120

Query: 797  LQRLKDLICNIGRRRLVLDLSCRKKGGKYAIVTDRWQKFSNVYLDEETLEFLAVHADEFL 618
            L+RLKDL+  +G+++LVLDLSCRKK G+YAIVTDRWQKFS+VYLDE+ LEFLA +ADEFL
Sbjct: 121  LERLKDLVRVVGKQKLVLDLSCRKKEGRYAIVTDRWQKFSDVYLDEKVLEFLANYADEFL 180

Query: 617  VHGVDVEGKRLGIDEELVALLGRHSPIPVTYAGGVMTMADLERIKVAGAGRVDVTVGSAL 438
            VHGVDVEGKRLGIDEELVALLGRHSPIPVTYAGGV  M DLERIKVAG  RVDVTVGSAL
Sbjct: 181  VHGVDVEGKRLGIDEELVALLGRHSPIPVTYAGGVTVMNDLERIKVAGDRRVDVTVGSAL 240

Query: 437  DIFGGDIAYKDVVAWHKKQESV 372
            +IFGG++ YKDVV+WH +QE++
Sbjct: 241  EIFGGNLPYKDVVSWHTQQETL 262


>ref|XP_003542605.1| PREDICTED: 1-(5-phosphoribosyl)-5-[(5-
            phosphoribosylamino)methylideneamino]
            imidazole-4-carboxamide isomerase, chloroplastic-like
            [Glycine max]
          Length = 309

 Score =  419 bits (1077), Expect = e-114
 Identities = 214/274 (78%), Positives = 241/274 (87%), Gaps = 1/274 (0%)
 Frame = -1

Query: 1184 RSRFSVHCVAAVRFRPCIDIHKGKVKQIVGSTLHDLKDG-GSDIVTNFESDKSAAEYADL 1008
            RS  SV C  AV+FRPCIDIHKGKVKQIVGSTL DLK G GSD VTNFESDKSAAEYA L
Sbjct: 38   RSPASVQC--AVQFRPCIDIHKGKVKQIVGSTLQDLKGGDGSDPVTNFESDKSAAEYAAL 95

Query: 1007 YKKDRLTGGHVIMLGGDDLSRSAAIDALLAYPGGLQVGGGINSDNALSFIEKGASHVIVT 828
            YK+D LTGGHVIMLG D LS+++A++AL AYPGGLQVGGGINSDN LS+IE+GASHVIVT
Sbjct: 96   YKQDGLTGGHVIMLGADPLSKASALEALHAYPGGLQVGGGINSDNCLSYIEEGASHVIVT 155

Query: 827  SYVFNNGHMDLQRLKDLICNIGRRRLVLDLSCRKKGGKYAIVTDRWQKFSNVYLDEETLE 648
            SYVFNNG MDL RLKDL+  +G+ RLVLDLSCRKK GKYAIVTDRWQKFS+V++D + +E
Sbjct: 156  SYVFNNGQMDLGRLKDLVQIVGKDRLVLDLSCRKKDGKYAIVTDRWQKFSDVFVDPDVME 215

Query: 647  FLAVHADEFLVHGVDVEGKRLGIDEELVALLGRHSPIPVTYAGGVMTMADLERIKVAGAG 468
            FLA  ADEFLVHGVDVEGK+LGIDEELVALLG+HSPIPVTYAGGV  M+DLERIK AG  
Sbjct: 216  FLANFADEFLVHGVDVEGKKLGIDEELVALLGKHSPIPVTYAGGVTEMSDLERIKTAGMD 275

Query: 467  RVDVTVGSALDIFGGDIAYKDVVAWHKKQESVAV 366
            RV+VTVGSALDIFGG++AY++VVAWH +Q + AV
Sbjct: 276  RVNVTVGSALDIFGGNLAYEEVVAWHAQQNASAV 309


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